Gene Details:

  • Gene ID: Glyma.05G178200.1.p
  • Gene Name: GLYMA_05G178200, LOC100798875
  • Gene Family: CAMTA Family
  • Description: CAMTA Family protein
  • Species: Glycine max
  • Source: CAMTA family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_006580273.1  — calmodulin-binding transcription activator 3-like isoform X1
  • TrEMBL:  K7KQY0  — K7KQY0_SOYBN; Uncharacterized protein
  • STRING:  GLYMA05G31190.2  — (Glycine max)

Gene Ontology:

  • GO:0045944  — Biological Process — positive regulation of transcription from RNA polymerase II promoter
  • GO:0005634  — Cellular Component — nucleus
  • GO:0001077  — Molecular Function — transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
  • GO:0005515  — Molecular Function — protein binding
  • GO:0043565  — Molecular Function — sequence-specific DNA binding

Family Introduction:

  • The CAMTA family of calmodulin binding transcription factors comprises six members in Arabidopsis (Bouche et al., 2002; Finkler et al., 2007). Each protein includes an IQ domain for calmodulin binding; ankyrin repeats for protein interactions; the TIG domain, which has nonspecific DNA binding activity; and the CG-1 domain, which has specific DNA binding activity. The CG-1 domain recognizes the core consensus sequence, vCGCGb, referred to as the CG-1 element (da Costa e Silva, 1994). This sequence matches the CM2 sequence, CCGCGT, and overlaps the ICEr1 element. Thus, the possibility was raised that one or more of the CAMTA proteins might have a role in regulating CBF2 expression.

Literature:

Sequences:

CDS Sequence:
  • >Glyma.05G178200.1.p|Glycine_max|CAMTA|Glyma.05G178200.1.p
    ATGGCTGAGGCCAGACACTACGTCCCCCCCTCTCAATTGGATATTAAGCAAATTATTTTAGAAGCACAGCATCGATGGCTACGTCCGGCTGAAATCTGTGCAATTCTCAGTAATCACAAGAAGTTTCTAATTGCTTCAGAACCTGCACATATGCCACCAAGTGGTTCACTTTTCTTATTTGATCGGAAGGTGCTGAGATACTTCAGAAAGGATGGCCATAACTGGAGGAAGAAAAAAGATGGAAAAACAGTTAGAGAAGCTCACGAGAGACTAAAGGCTGGAAGCGTGGATGTGTTGCATTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTTCGAAGACGCACATATTGGCTACTTGAAGAGGAACTCTCTCACATTGTTCTCGTCCATTATCGACATGTGAAGGGAACCAAGGCAAATTTTACATGTGCTAAAGAAAATGAAGAAACTCTTCCTTATGCTCAACAAACTGATAAAATTATGCCCAAAACAGAGATGGAAACTTCTTTATCATCTACTCTTCATCCACATAGTTACCAGGTTCCTTCACAAACTATGGATAGAAGCATGAACAGTTCCCAAGCATCAGAATATGAAGAAGCAGAATCTGCATTCAACAACCATGCAAGTTCTGAGTTTTATTCTTTCCTTGAGTTAGAACGCCCTGTTGAGAAGATTACACCTCAACCTGCTGATTCTTATTCTCCTCGGCCACTCACAAGAAAGTCTGTACCTAACATGAACTGCATTATTGAATCTGGGACAGATGATCAAGAGAAGTCACCTGTCATTCCTGGGGTGAATTATATCTCACTCACTCAAGACAATAAAATCAAAGACATTCATAATTTTGGATTGACATATGAATCCCCAAAACCCCTTGGCTTTTCCTCATGGGAAGGTATCTTAAAAAATAATGCTGGAAGTCAACATGTGCCTTTTCAGCCTTTATTTCCTGGAACACAGCCTGACAACATGGGAATCAATAGCAAATTTTCCCAAGGACATGAGATAATGGTGCCATATTTGACCACCAGCATTGCTAAGCAGCATGAGAATGGAAGTCTCATACAAGCTGAAGGAAATTGGCAGGCTTATGATGTTGATTCTTTACGCATGTCCAGTTGGCCTATAGATAGTGCTTATTCAGGCTCATCATGTGACATAACTTGCAGCAACCGTGAGCAGGAGGTTAATGATGTTGATTTGCAGAAATCCTTGGAACAGTGTCTTCTACATCCATACAAACAAAACAAGGTTTTCATGCAAAATGATCCTCAGGAAAAACTTTTGAATGAAAAAGAAAAGATAAAATCAGACCTAGAGGCCAATAGAATCCTGGATGGAATAGAAGACACATATTTCACTTTTAAAAGGACTCTGTTAGATGGATCTCCAGCAGAAGAGGGTCTGAAGAAGCTTGACAGTTTCAACCAATGGATGAGTAAAGAGCTTGCAGATGTGGAAGAGTCTAATAAACCATCCACTTCTGGTGGTTATTGGGATACAGTTGAAAGCGAAAATGAGGTTGGCAACACAACTATTCCTTCACAAGGGCACCTGGACACCTATGTATTGGATCCATCTGTTTCCCATGATCAGCTTTTTAGCATTATAGACTATTCCCCAAGCTGGGCATTTGAAGGGTCAGAAATTAAGGTTATTATTTCTGGACGATTCTTAAGAAGTCAACATGAAGCAGAACAAGGTAAATGGTCATGCATGTTTGGCGAGGTAGAAGTGCCAGCAGAGATCATTGCAAAAGGTGTTCTTTGTTGTCATACTCCTCCACACAAGGCTGGGAGGGTACCTTTCTATGTAACTTGTTCCAATAGGTTAGCATGTAGTGAGGTGAGAGAATTTGATTTCCAAGTCAACTATACTCCAGAAGTTAACACTACAGGTGAGAATAGAGGCAGCACTTTTGATACTTTTAGTATCCGATTTGGAGAACTGTTGTCCCTGGGGCATGCCTTTCCTCAGAATTCAGATTCAATTAGTGTTAGTGAGAAATCTCAACTGAGAAGTAAAATCAATTCTTTACTGAGGGAGGAGGAGGATGATTGGGACAAGCTACTGAAACTTACTCAAGAGGAAGATTTTTCTCCAGAAAATTTACAGGAGCAGCTGCTTCAAAATCTTCTGAAAGATAAGTTACATGCATGGCTCCTTCAGAAAATAACAGAAGAGGGGAAAGGCCCTAATATATTAGATGAGGGTGGCCAAGGTGTGCTTCATTTTGCATCTGCTCTTGGCTATGATTGGGCCCTAGAACCCACAATAGTTGCTGGTGTGAATGTGAACTTTCGGGATGTAAATGGATGGACTGCTCTTCATTGGGCAGCATTTTGTGGCAGGGAGCGCACAGTTGCTTTCCTCATCTCTCTCGGCGCAGCACCTGGAGCACTGACTGATCCATGTCCAGAACATCCTTCTGGTAGAACACCAGCTGACCTAGCTTCTGCAAATGGACACAAAGGAATTGCAGGGTATCTTGCTGAGTCTTCACTAAGTGCACACCTCACAACTCTCGATTTGAACAGGGACGCAGGAGAAAATTCCGGAGCAAAAGTAGTCCAAAGAGTCCAAAACATTGCTCAAGTTAATGATCTTGATGGTTTATCATATGAATTGTCATTGAAAGATTCATTGGCTGCAGTGCGTAATGCCACCCACGCTGCAGCTCGTATTCATCAAGTTTTCAGAATGCAATCATTTCAGAGAAAACAACTGAAGGAATATGATGATGACAAACTTGGATTATCTGATGAACGTGCTCTTTCACTTGTAAAAATGAATATGAAATCACACAAGTCTGGACCACGTGATGAGCCTGTCCATGCTGCTGCAGTACGAATCCAAAACAAATTCCGCAGTTGGAAGGGAAGAAGAGAATTTTTAATGATTCGACAACGCATAGTAAAAATTCAGGCTCACGTGAGAGGTCACCAGGTCAGGAAAAGCTGTGGGAAGATAATTTGGTCCGTTGGAATCTTGGAGAAGGTTATTTTACGTTGGCGTCGAAAAGGTAGTGGTTTGCGTGGATTTAAACCGGAGGCCAATTCTGAGGGAACTATGATACAAGATGTATCTTCAACAGATGATGACTATGATGTCTTAAAAGAAGGCAGGAAGCAAACAGAGCAAAGGTTGCAGAAAGCCCTAGCTAGGGTGAAGTCAATGGTTCAGTATCCAGAGGCAAGAGACCAATACCATAGGCTGTTGAATGTTGTAACTGAGATCCAAGAAAATCAGGTAAAGCATGAGAGCAGTTATAACAATTCAGAAGAACCGAGAGAATTCGGTGACCTCAACGATCTTGAAGCATTGTTGGACGAAGATATTTTCATGCCTACAGCAACTTAG
Protein Sequence:
  • >Glyma.05G178200.1.p|Glycine_max|CAMTA|Glyma.05G178200.1.p
    MAEARHYVPPSQLDIKQIILEAQHRWLRPAEICAILSNHKKFLIASEPAHMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEENENFRRRTYWLLEEELSHIVLVHYRHVKGTKANFTCAKENEETLPYAQQTDKIMPKTEMETSLSSTLHPHSYQVPSQTMDRSMNSSQASEYEEAESAFNNHASSEFYSFLELERPVEKITPQPADSYSPRPLTRKSVPNMNCIIESGTDDQEKSPVIPGVNYISLTQDNKIKDIHNFGLTYESPKPLGFSSWEGILKNNAGSQHVPFQPLFPGTQPDNMGINSKFSQGHEIMVPYLTTSIAKQHENGSLIQAEGNWQAYDVDSLRMSSWPIDSAYSGSSCDITCSNREQEVNDVDLQKSLEQCLLHPYKQNKVFMQNDPQEKLLNEKEKIKSDLEANRILDGIEDTYFTFKRTLLDGSPAEEGLKKLDSFNQWMSKELADVEESNKPSTSGGYWDTVESENEVGNTTIPSQGHLDTYVLDPSVSHDQLFSIIDYSPSWAFEGSEIKVIISGRFLRSQHEAEQGKWSCMFGEVEVPAEIIAKGVLCCHTPPHKAGRVPFYVTCSNRLACSEVREFDFQVNYTPEVNTTGENRGSTFDTFSIRFGELLSLGHAFPQNSDSISVSEKSQLRSKINSLLREEEDDWDKLLKLTQEEDFSPENLQEQLLQNLLKDKLHAWLLQKITEEGKGPNILDEGGQGVLHFASALGYDWALEPTIVAGVNVNFRDVNGWTALHWAAFCGRERTVAFLISLGAAPGALTDPCPEHPSGRTPADLASANGHKGIAGYLAESSLSAHLTTLDLNRDAGENSGAKVVQRVQNIAQVNDLDGLSYELSLKDSLAAVRNATHAAARIHQVFRMQSFQRKQLKEYDDDKLGLSDERALSLVKMNMKSHKSGPRDEPVHAAAVRIQNKFRSWKGRREFLMIRQRIVKIQAHVRGHQVRKSCGKIIWSVGILEKVILRWRRKGSGLRGFKPEANSEGTMIQDVSSTDDDYDVLKEGRKQTEQRLQKALARVKSMVQYPEARDQYHRLLNVVTEIQENQVKHESSYNNSEEPREFGDLNDLEALLDEDIFMPTAT*