Gene Details:

  • Gene ID: Csa11g033920.1
  • Gene Family: CAMTA Family
  • Description: CAMTA Family protein
  • Species: Camelina sativa
  • Source: CAMTA family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_019087411.1  — PREDICTED: calmodulin-binding transcription activator 5-like
  • Swissprot:  O23463  — CMTA5_ARATH; Calmodulin-binding transcription activator 5
  • TrEMBL:  R0GWD2  — R0GWD2_9BRAS; Uncharacterized protein
  • STRING:  XP_010449842.1  — (Camelina sativa)

Gene Ontology:

  • GO:0005634  — Cellular Component — nucleus
  • GO:0003677  — Molecular Function — DNA binding

Family Introduction:

  • The CAMTA family of calmodulin binding transcription factors comprises six members in Arabidopsis (Bouche et al., 2002; Finkler et al., 2007). Each protein includes an IQ domain for calmodulin binding; ankyrin repeats for protein interactions; the TIG domain, which has nonspecific DNA binding activity; and the CG-1 domain, which has specific DNA binding activity. The CG-1 domain recognizes the core consensus sequence, vCGCGb, referred to as the CG-1 element (da Costa e Silva, 1994). This sequence matches the CM2 sequence, CCGCGT, and overlaps the ICEr1 element. Thus, the possibility was raised that one or more of the CAMTA proteins might have a role in regulating CBF2 expression.

Literature:

Sequences:

CDS Sequence:
  • >Csa11g033920.1|Camelina_sativa|CAMTA|Csa11g033920.1
    ATGGCCGGCGTTGGTTCCGGCAAGCTCATCGGATCGGAGATTCATGGATTCCATACTTTGCAAGATCTGGATATACAAACTATGTTGGATGAAGCTTACACTAGGTGGCTCCGTCCAAACGAGATCCATGCTCTTCTTTGTAATCATAAATTCTTCACCATCAACGTCAAACCAGTGAATTTGCCCAAAAGTGGTACAATTGTGTTGTTCGACCGGAAGATGTTGAGGAACTTTAGAAAGGATGGTCATAACTGGAAAAAGAAGAAGGATGGAAAAACAATTAAGGAAGCTCATGAACACCTAAAAGTGGGTAACGAGGAAAGGATTCATGTTTACTATGCCCATGGCAATGATAACCCTACATTTGTGCGAAGGTGTTACTGGTTGTTGGATAAGTCTCAGGAGCACATAGTTCTTGTTCACTATCGCGAGACACATGAGGCTCAGGCAGCTCCAGCAACACCTGGAAACTCCTACTCAAGTTCGATCTCTGAACTATCACCAAAACTTGTGGCTGAAGATATCAATTCTGGTGTCCGTAATACTTGTAATACAGATCTGGATATACAAACTATGTTGGATGAAGCTTACACTAGGTGGCTCCGTCCAAACGAGATCCATGCTCTTCTTTGTAATCATAAATTCTTCACCATCAACGTCAAACCAGTGAATTTGCCCAAAAGTGGTACAATTGTGTTGTTCGACCGGAAGATGTTGAGGAACTTTAGAAAGGATGGTCATAACTGGAAAAAGAAGAAGGATGGAAAAACAATTAAGGAAGCTCATGAACACCTAAAAGTGGGTAACGAGGAAAGGATTCATGTTTACTATGCCCATGGCAATGATAACCCTACATTTGTGCGAAGGTGTTACTGGTTGTTGGATAAGTCTCAGGAGCACATAGTTCTTGTTCACTATCGCGAGACACATGAGGCTCAGGCAGCTCCAGCAACACCTGGAAACTCCTACTCAAGTTCGATCTCTGAACTATCACCAAAACTTGTGGCTGAAGATATCAATTCTGGTGTCCGTAATACTTGTAATACAGGGTTTGAAGTGCGCAGCAACAGTCTGGGTTCTAGAAATCATGAGATTAGGCTTCATGAGATCAATACGCTTGATTGGGATGAGCTTCTAGTACCAGCAGATATTAGCAACCAGTCTCATCCAACAGAAGAAGACATGCTATACTTCACAGAACAGCTCCAAACTGCACCTAGGGGATCTACAAAGCAGGGATATCATCTTGCAGGCTACAACGGATCAGTAGATATACCATCATACCCCGGTCTCGACGATCCTGTTTACCAAAATAATAACTCATGTGGTGCAGGAGAATTTTCTAATCAGCATGTGCACTGTGGAGTAGAGTCAAATCTACAGAGTAGGGATTCCAGT
Protein Sequence:
  • >Csa11g033920.1|Camelina_sativa|CAMTA|Csa11g033920.1
    MAGVGSGKLIGSEIHGFHTLQDLDIQTMLDEAYTRWLRPNEIHALLCNHKFFTINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNEERIHVYYAHGNDNPTFVRRCYWLLDKSQEHIVLVHYRETHEAQAAPATPGNSYSSSISELSPKLVAEDINSGVRNTCNTDLDIQTMLDEAYTRWLRPNEIHALLCNHKFFTINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNEERIHVYYAHGNDNPTFVRRCYWLLDKSQEHIVLVHYRETHEAQAAPATPGNSYSSSISELSPKLVAEDINSGVRNTCNTGFEVRSNSLGSRNHEIRLHEINTLDWDELLVPADISNQSHPTEEDMLYFTEQLQTAPRGSTKQGYHLAGYNGSVDIPSYPGLDDPVYQNNNSCGAGEFSNQHVHCGVESNLQSRDSS