Information report for Zosma194g00140.1
Gene Details
|
|
Functional Annotation
- Refseq: XP_020106930.1 — lysine-specific demethylase REF6
- Swissprot: Q9STM3 — REF6_ARATH; Lysine-specific demethylase REF6
- TrEMBL: A0A0K9PP59 — A0A0K9PP59_ZOSMR; Uncharacterized protein
- STRING: GSMUA_Achr10P03980_001 — (Musa acuminata)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Zosma194g00140.1|Zostera_marina|C2H2|Zosma194g00140.1
ATGCCAGGCTCAGGTTTCTCCCCGTTGGGAGAAGATAACAGTATGGCGGAAAGGTTGATGGAAGCAGACGATTGGGAAAATGTGGGAGACACGCCATGGAATATGCGAGTGGTGCCAAGGACAAGGGGTTCATTGCTTAAGTTCATGAAAGATGATATCCCTGGTGTTACTACACCAATGGTATATGTTGGAATGATGTTTAGTTGGTTTGCTTGGCATGTGGAGGACCATGAGTTACATAGTTTGAATTACTCGCATTTGGGTGCTGGAAAGGTATGGTATGGAATACCAAGGGATGCTCGACTTGCGTTTGAGGAGGTAGTTCGAGTGCAGGGATATGGTGGTGAAGTCAATCCTTTAACTACTTTGTTTATTTTGGGTGAGAAGACAACCATTCTGTCTCCTGAAGTACTTGTTGCTGCTGGAGTTCCCTGTTGCAGACTGGTGCAAAATCCTGGAGAATTTGTCGTGACTTTCCCAGGGGCATATCATTCAGGATTCAGTCTTGGATTTAACTGTGGAGAGGCAGCAAATATTGCAACTCCAGAGTGGCTGAAAGTAGCAAAAGAAGCTGCAATTCGTAGAGCTTCTATTAATCATCCTCCCATGATCTCTCATTTCCAGTTGCTATATAAGCTTGCCCTCTCATTATGTTCCAGAATGGTTGAAAAAAATGTCAATGAACAACGGAGTTCTAGATCGAAGGGCAAGAGCAAATGTGAAGGAGATATCATTATTAAAGAGCAATTTGTCAAGAATGTTATTCAAACTAACAATCTACTTGGTTCCATCACTCTTGATGATAAATTATCGTGTGTGCTTCTTTCACAGAATAAATATGATGCTTCTTTGGGTCCTAATTCTTCAAGTACTGGATCTCAAATAAAGTTTCAACCAAATTTTCCAACTGAATGTTCTTTTCCATCTTCGGAGTTTACAGAAAGAATCCATTCTTTTAAATGCAATACATCTGAGAAAAGACAGCATAAATGTGGTGGATCGTCAGATCAAAATCTTTTCTCATGTGTTGCATGTGGGATATTAAGTTTTGCTTGTGTTGCCATTGTTTGGCCTACAGAGACTGCTGCAATGAATCTAATGACTTATGGTTGCAGTTCTTTGAGTGATCAATCCTCTGACAAAGATAACATCAGAAATTCGAATCCAAGTAGATATAATGATCTTGTTGCTTCAGGGCATTCAATGGCCAGTACGATTAATGATGAGAAAATAACATATTCTGGAGAATGCCAAGCACAATATCCAAGTCAGATTGAAGAAATAGCCTCTGAAGGTAGATTAAAGAAAGATCTTTCTTCTCTTTCCCTTATAGCATCTGCTTATGGTGACTCTTCAGATGATGACCATCCATCTCCATCCAAGATTGTGAATAAAAATAAAAATGAAGGTCATCTTCAGAATAAGGTATCAAAGAATATGGATTTTTCACTTAGCAAAGTAAAACAGTACCAAAGGTGGAGTGGTTTACAATTAGACCACTCGGGCTCATTTTTAATGAATAAACCAGACAAAGATTCTTCCAGAATTCATGTATTCTGTCTTGAACATGCTCTGGAGGTACAAAGAAAACTTCGTTCAATTGGTGGAGCGTGTTTGTTGCTTGTGTGTCATTCTGACTATCCAAAAATAGAAGCTGAAGTGAAGCATATGGCAAAGGAATTGGGAGTTAATAATGCATGGAAAAATATCAATTTTAAGGAACCGAGTAGCCAAGACGAACAAATCATTCAATCTGCGTTGGAAGATAAGGGAGCAGTTCCTGTGAATAGTGATTGGTCAGTGATGATGGGTTTCAATCTATGGTTCAGTGCCAACATCAGCAAATCTTTTCTATATTCTAAGCAGATGCCATATAATGTGGTGATATACAAAGTTTTTGGTCGTGATTCCTCTGGCACCTCTCCTGGAAAACTGAGGAAAATGACAAGGAATGGCAAACAGAAGAAGAAAGTTGTTGTTTCTGGGAAATGGTGTGGAAAGGTTTGGATGTCAAATCAGGTCCATCCTTATTTAGCTTATGTGAATGAAAACAATGATGGGAAGGAAGATGATTTTGTTAAAAATTTAAGATTAGGTCAAGGTACTTGTCGAAGGAAGATTCTAACAGATTTTGCAAATCATGCTGATGCTGAGAAAGTACCAATACCTAGAGGTAGTCATCTGGAGATAAACATGGGAAGCAGATCAGCCATAAGGAGAAAGAAACCATCAATAAGGAAAAATATCAAGAAACCAAATTACAGTCAACCTGAAAATTGTGATACAATCATCGATCATGATGATTCCCAGAGTGTTCTAGCTGATTTTGCAAAACATGTTGAGACGGACAAAGTAAGACCATCTACAAGTAGTCATTTGGAAATAGAGACGGAAAACATATCAGTCATAAGGAAGAATAAACCATCAAAAAGGAAAAATAGCAAGAAAACAAAATACAATCAACTTGTAAACCATGATGCAATTATCAATGACGACGATGACTTTGAGAGGGTTCTAGCTGATTTTGTAAATCACGTCGGGGTTAAGAAAGTAAGAACATCGGCTAGTAGACATCTGGGGGTGGGTACAGAGATGGCAAGCAAATCATCCATAAAAAGGAAGAAAACACCAAAAAAGAAAAATACCAAGAAACCAAAGTGCAGCCAACCTGAAAACTGTGATGCAATCATCAATGATGATGATGATTTAGTTGATTCTTGGAGGATTCTTAGTAGTAGAAGTGTGAAGAAACTTCCTTCTTCTCCCCCAAACTGTACCAATGATGATGAGATGGTAACAGCTGTTGGTTTAGATTTGGAAATGGATGGTGTTGGCAGCGATGGATGCTCAATGGCGCCGCCAAAGAGAAAATCTGGAAGGCATGGAACAACAGAAATGAAGGAAGATAAAAATGAGGAGACGATGGTAAAGCAACAATATCTATGCGACATGAAAGGCTGTAGCATGAGCTTCAATTTTGAACATGAATTGGCAATGCACAAAAACAATCAATGTCCTGTGATAGGATGTGGTAAGAAGTTGTTTTGTCACAGGTATGCAGTGCAACATCATCGTATTCACCTGGACAGTCGTCCCCTGAAATGCCCGTGGGAAGGCTGCGGGATGACATTCAAATGGAAATGGCCGCAGACTGAACATTATCGTGTGCACACTGGTGAGCGACCTTATGTATGTCAGGAGCCTAGCTGTTCCAAAACATTCAGGTTTGTTTCGGATTTCAGTCGTCACAAGCGAAAGACTGGTCATGTTTCTGTCAAGAGAAAGAGAAAGATATGA
Protein Sequence:
- >Zosma194g00140.1|Zostera_marina|C2H2|Zosma194g00140.1
MPGSGFSPLGEDNSMAERLMEADDWENVGDTPWNMRVVPRTRGSLLKFMKDDIPGVTTPMVYVGMMFSWFAWHVEDHELHSLNYSHLGAGKVWYGIPRDARLAFEEVVRVQGYGGEVNPLTTLFILGEKTTILSPEVLVAAGVPCCRLVQNPGEFVVTFPGAYHSGFSLGFNCGEAANIATPEWLKVAKEAAIRRASINHPPMISHFQLLYKLALSLCSRMVEKNVNEQRSSRSKGKSKCEGDIIIKEQFVKNVIQTNNLLGSITLDDKLSCVLLSQNKYDASLGPNSSSTGSQIKFQPNFPTECSFPSSEFTERIHSFKCNTSEKRQHKCGGSSDQNLFSCVACGILSFACVAIVWPTETAAMNLMTYGCSSLSDQSSDKDNIRNSNPSRYNDLVASGHSMASTINDEKITYSGECQAQYPSQIEEIASEGRLKKDLSSLSLIASAYGDSSDDDHPSPSKIVNKNKNEGHLQNKVSKNMDFSLSKVKQYQRWSGLQLDHSGSFLMNKPDKDSSRIHVFCLEHALEVQRKLRSIGGACLLLVCHSDYPKIEAEVKHMAKELGVNNAWKNINFKEPSSQDEQIIQSALEDKGAVPVNSDWSVMMGFNLWFSANISKSFLYSKQMPYNVVIYKVFGRDSSGTSPGKLRKMTRNGKQKKKVVVSGKWCGKVWMSNQVHPYLAYVNENNDGKEDDFVKNLRLGQGTCRRKILTDFANHADAEKVPIPRGSHLEINMGSRSAIRRKKPSIRKNIKKPNYSQPENCDTIIDHDDSQSVLADFAKHVETDKVRPSTSSHLEIETENISVIRKNKPSKRKNSKKTKYNQLVNHDAIINDDDDFERVLADFVNHVGVKKVRTSASRHLGVGTEMASKSSIKRKKTPKKKNTKKPKCSQPENCDAIINDDDDLVDSWRILSSRSVKKLPSSPPNCTNDDEMVTAVGLDLEMDGVGSDGCSMAPPKRKSGRHGTTEMKEDKNEETMVKQQYLCDMKGCSMSFNFEHELAMHKNNQCPVIGCGKKLFCHRYAVQHHRIHLDSRPLKCPWEGCGMTFKWKWPQTEHYRVHTGERPYVCQEPSCSKTFRFVSDFSRHKRKTGHVSVKRKRKI*