Information report for Zjn_sc00135.1.g00750.1.am.mk
Gene Details
|
|
Functional Annotation
- Refseq: XP_002462814.2 — protein indeterminate-domain 9
- Refseq: XP_004957598.1 — protein indeterminate-domain 5, chloroplastic
- Refseq: XP_004957599.1 — protein indeterminate-domain 5, chloroplastic
- Refseq: XP_004957600.1 — protein indeterminate-domain 5, chloroplastic
- Refseq: XP_021308608.1 — protein indeterminate-domain 9
- Refseq: XP_021308609.1 — protein indeterminate-domain 9
- TrEMBL: A0A1D6IAP1 — A0A1D6IAP1_MAIZE; Indeterminate1 domain7
- STRING: Pavir.Ba01478.1.p — (Panicum virgatum)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Zjn_sc00135.1.g00750.1.am.mk|Zoysia_japonica|C2H2|Zjn_sc00135.1.g00750.1.am.mk
ATGCACTTGATCAATGATGACGATGCAGATCCCGACGCGGAGGTGATCGCGCTGTCCCCGGGCACGCTGCTGGCGACGAACCGGTTCGTGTGCGAGGTGTGCAACAGGGGGTTCCCGCGCGAGCAGAACCTTCAGCTCCACCGGCGCGGGCACAACCTCCCCTGGCGGCTGAAGCAGAAGAACCCCAAGGAGGCGCGGCGCAAGGTGTACCTGTGCCCGGAGCCGACGTGCGTGCACCACGACCCGTCCCGGGCGCTCGGCGACCTCACGGGCATCAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCAACAAGCTCTACGGCGTGCAGTCCGACTGGAAGGCGCACTCCAAGACCTGCGGCACGCGCGAGTACCGGTGCGACTGCGGCAAACTCTTTTCAAGGTATCCATGCCTGGATTCCCCGTTCTCGATCGATCCTGCTAATTTCCTCGCGATCATCACCATAATCTTCTTCCTGTTTTTCACCGCCTCGGAATCCACGCTCGGCATCCCCACCGGTTCACGTGAAGACATTGCGCTCCCCGCAAGCGCGCGGCCGCATGCTTCCTTCTTGAAGGACAGCTTCATCACCCACCGTGCTTTCTGCGACGCTCTGGCTCGTGAGAGCGCGCAGATAACACCATTGGGCACCGGTCTCTACGTCGGCTCTGGCGGCACGGCCCTCGGTGTGTCCGGCGGGGCTCCCCAGATGTCTGCAGTCTTCGGAACCCAAGCCCAACCCTCAGCTGCGGCGGCCGCGCAGCTCGACCACATCATGGCATCGTTCTCAAGCCCCTCCATGTTCGGGTCTCAGGCATCAGCCTGTTCCTCATCGTTCTTCCTTGGTGGCGGCGGCGGTCCTCCTCCTTCCCAACTGGACTTCTCCGAGGACGGAGACTATTCCCAGGGTAGCCAGAGCTCTCATCTGCTTCATAGCAAGACGCCAGCCGGCTTCCACGGCCTCATGCAGCTCCCGGAGCAGAACCAGCAGGGAAGCAAAGCCAACGGTAACCTCCTCAACCTCGGGTTCTTCTCCAACAACAGCGGTGGCGCGGCCGCTGGCCAGGACGCGCGCCTAGTAATCCAAGACCAATTCAACGGCAACACCGAGCAGCGCAGCATGACGGCATCCGTCGGAAACCACCTCAGCGGCAACTTTTCTTCCCTGTACAACTCACCTGGATCAGCATCTGCCAGCGACCTGCCACTGAACTCGGCGACGGCGCTCCTGCTCAAGGCGGCTCAGATGGGCTCGACGACGTCGAGCAACCCCAACTGTACAAGCGCGCTGCTCCGTGCAGCCGGATTCGGTGGCAATGCGCAGCAGGGGAACAGTGCTGCAGGGGAAGGGTCGGCGGCAGACGAGACGCACATCCATGACCTCATCATGAACTCTTTGGCCAGCGGTAGCGGCGGCACAGGGCTGGACGACGGCACAAGGGACTTCCTCGGTGTCGGCAGGGGCTCGATGGCGTCGATTGGGGTCCACATGGGCGCACTTGATCCAGCCCAGATGAATCTATTTGAAACACATGCCGTTGACGACAACCGGCGAGCGCGTCATGTCCGATATCGGGTTCCTGGAAAGCAGAGCTACACGGGCACGAGACGGACCCCTCCGTCCCAGCTCCTGCTAATTGCATGGGCACGGCCTTACCAATGTGGCGAAGCGTTGGCCTTAGCTTGTTTCTTTCTTGATACCCCGCCCGGTCGGCGTCGTCTCAGCCTTTGCATGCGCCACCTGACCCCTGCTGCCAGTGCCCGATGCTTTGTTGGAAGCCCCGGGACAAGAAAGCGGGAACATGCGTCGAAAAGCACCGGGCGGCAGGGGTCAACAAGATCAGCACCATGCGCTCAGCGAGGCCCCTGCAGGCTGGAGGAGGGATCGGCTTGGCGCGCGCGGTGGGTCGAGTACACACGCGCGCTTACAGGTCGATCGATCGGGGATAGCACATGCGTGAGGGGCTCGGTTTGTCTCTGGCGCTGGCCCGGTGCCCTTGGCGCCTTGCCCCGGGAGGCATTAGTTGGTACCACCACGCGTGGCCTGTTGCTGACTCCAATCAGCGCGGACAAGCTCGACTCGAAGCAGGGGCGATGGAGTTCTTGGCGGCTTGCATGCTCGCACAGAATCCAATCTTCTCCATCGATCGTCCTCGAGGCTGGATGCGCTTAA
Protein Sequence:
- >Zjn_sc00135.1.g00750.1.am.mk|Zoysia_japonica|C2H2|Zjn_sc00135.1.g00750.1.am.mk
MHLINDDDADPDAEVIALSPGTLLATNRFVCEVCNRGFPREQNLQLHRRGHNLPWRLKQKNPKEARRKVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCNKLYGVQSDWKAHSKTCGTREYRCDCGKLFSRYPCLDSPFSIDPANFLAIITIIFFLFFTASESTLGIPTGSREDIALPASARPHASFLKDSFITHRAFCDALARESAQITPLGTGLYVGSGGTALGVSGGAPQMSAVFGTQAQPSAAAAAQLDHIMASFSSPSMFGSQASACSSSFFLGGGGGPPPSQLDFSEDGDYSQGSQSSHLLHSKTPAGFHGLMQLPEQNQQGSKANGNLLNLGFFSNNSGGAAAGQDARLVIQDQFNGNTEQRSMTASVGNHLSGNFSSLYNSPGSASASDLPLNSATALLLKAAQMGSTTSSNPNCTSALLRAAGFGGNAQQGNSAAGEGSAADETHIHDLIMNSLASGSGGTGLDDGTRDFLGVGRGSMASIGVHMGALDPAQMNLFETHAVDDNRRARHVRYRVPGKQSYTGTRRTPPSQLLLIAWARPYQCGEALALACFFLDTPPGRRRLSLCMRHLTPAASARCFVGSPGTRKREHASKSTGRQGSTRSAPCAQRGPCRLEEGSAWRARWVEYTRALTGRSIGDSTCVRGSVCLWRWPGALGALPREALVGTTTRGLLLTPISADKLDSKQGRWSSWRLACSHRIQSSPSIVLEAGCA