Information report for Zjn_sc00015.1.g03140.1.am.mk
Gene Details
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Functional Annotation
- Refseq: XP_002444487.1 — protein indeterminate-domain 14
- TrEMBL: C5YM72 — C5YM72_SORBI; Uncharacterized protein
- STRING: Sb07g022700.1 — (Sorghum bicolor)
- GO:0009630 — Biological Process — gravitropism
- GO:0009965 — Biological Process — leaf morphogenesis
- GO:0010601 — Biological Process — positive regulation of auxin biosynthetic process
- GO:0048444 — Biological Process — floral organ morphogenesis
- GO:2000012 — Biological Process — regulation of auxin polar transport
- GO:2000904 — Biological Process — regulation of starch metabolic process
- GO:0005634 — Cellular Component — nucleus
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0043621 — Molecular Function — protein self-association
- GO:0044212 — Molecular Function — transcription regulatory region DNA binding
- GO:0046872 — Molecular Function — metal ion binding
- GO:0046982 — Molecular Function — protein heterodimerization activity
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Zjn_sc00015.1.g03140.1.am.mk|Zoysia_japonica|C2H2|Zjn_sc00015.1.g03140.1.am.mk
ATGTTGAGTTCTTGCGCCCCGACGACGGCCATGCCGCATCCCGAGCCGGCGGTCGCCGGGACACCGGAACAGTTCCGGTCGCTGCAGATCGCCACGGCCGGTGCCGCAGGCGGTGCCAAGAAGAAGCGGCGGCCAGCCGGCACTCCGGACCCGGACGCGGAGGTGGTGTCGCTGTCTCCGCGCACGCTGCTGGAGTCGGACCGGTACGTGTGCGAGATCTGCGGGCAGGGGTTCCAGCGAGACCAGAACCTGCAGATGCACCGGCGGCGGCACAAGGTGCCGTGGAAGCTGCTGAAGCGCGAGGCCGGCGAGGCGGCGCGGAAGCGCGTGTTCGTGTGCCCGGAGCCGAGCTGCCTGCACCACGACCCCGCGCACGCGCTTGGCGACCTCGTCGGGATCAAGAAGCACTTCCGGCGCAAGCACAGCGGCCACCGGCAGTGGGCGTGCGCCCGCTGCTCCAAGGCCTACGCCGTCCACTCCGACTACAAGGCGCACCTCAAGACCTGCGGCACACGCGGCCACACCTGCGACTGCGGCCGCGTCTTCTCCAGACCTTTCATGAGCTCATCAATCTACTCGCCTCGCTCTCTTTTGGCGTCCGTCGTCAAGAGGGACGGGAAGGGACAGGCACAATTCCCGAGGGCGTCAGCAGCAGCAGCGACTCCGCTTGGCTCTTGCGGCCGCGCCATTGAACGCAACCAGACGGCCCGGAAACTCATGAGCCTGACAAGGATAGCAAAGCCCCTGATCGCATCCTTGGCTTCTTCTTTCCTCGCCCTCGCCGGTGAACGACCGGCCGGCCGCCTGGAAAGCTGGATCCCCGTCCCAGCCATTGCTTGGCGTTGCGTAGCTTGCGACCGAGAGGAGCAGTCAGCCGATGAGCGGGCACATACAATACAGCCGCGCCATCACTTCACAACACTCGTCTTCCACAGCTTCCACTCCACCCTACGCACGCAAGCGCGTTTGGTGGAGAGCTTTATCGAGCACCAGGACACGTGCAACGCCAGCCGGCCGGCGCGGGCAGAGGCGGCGTCGACGTCGTCGCCGGCAAGCGGAGGGGGTAATGGTGGTGGTGGGCTTGGCGTGACGGCTGCCTCCTCGTCGCAGCAGCAGCAGAGCAGGCAGGTGCACGCGGCGGCGGCGATGTCGCGGACGACGTCCAGCGCCAGCCCGTCCAGCGGAGGTGATCTCGTGGTCAGCGCGGGGGCCTCGCCTGCAGTAACGGCGATGGCGAGCTCCTCCACAGCCAATGTCGCGGGGTTCCACCGCTTCGATCCTCCGGCGCCGTCGGTGGAGCGTCGTCGACCCGGCGTCCACAACCTGGAGCTGCAGCTCATGCCACCGCGCGAGGACGGCGCTGCTCTTCCTGGGTTCGGTTACTTCGCATCCGCGCCGCATTCTCCTTCCGTCCCTCCGCGGCGGGGCGCGGAGCACCCAACGCGGCTGCAACTGTCCATTGGGGTCGGTGGCCGCGCAACGGATGACAAACCCCAAGCTTCGGCTTTGGGAGCGGCGTCGGCGACGGCAGCGAGGCTGAACGAGGAAGCGCGGGAGCAGCTCCGGCTGGCGCTGGCGGAGAAGGCAGCGGCGGAAGCGGCCCGCGCGCAGGCGCGGCGGCAGGCGGAGCTGGCCGAGCAGGAACTGGCGAGCGCCCGGCGCATGCGGCAGCAGGCGCAGGTAGAGCTGGGCCGCGCGCACGCGCTCCGCGACCACGCCGTGCGCCAGGTGGACGCCACGCTGATGCAGGTCACGTGCTACAGCTGCCGCGGCAAGTTCCGCGCCCGGGCGGGCGCCGTGAGCACCGAGGTGGCGAGCTACGTGTCCTCCGTCGTCACTGAAGGCGGCGACGCAGAGGTCGACAACGACGACGACGGCCTTCCGAGCCACGGCAAGATGGACATGAACTAG
Protein Sequence:
- >Zjn_sc00015.1.g03140.1.am.mk|Zoysia_japonica|C2H2|Zjn_sc00015.1.g03140.1.am.mk
MLSSCAPTTAMPHPEPAVAGTPEQFRSLQIATAGAAGGAKKKRRPAGTPDPDAEVVSLSPRTLLESDRYVCEICGQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKRVFVCPEPSCLHHDPAHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTCGTRGHTCDCGRVFSRPFMSSSIYSPRSLLASVVKRDGKGQAQFPRASAAAATPLGSCGRAIERNQTARKLMSLTRIAKPLIASLASSFLALAGERPAGRLESWIPVPAIAWRCVACDREEQSADERAHTIQPRHHFTTLVFHSFHSTLRTQARLVESFIEHQDTCNASRPARAEAASTSSPASGGGNGGGGLGVTAASSSQQQQSRQVHAAAAMSRTTSSASPSSGGDLVVSAGASPAVTAMASSSTANVAGFHRFDPPAPSVERRRPGVHNLELQLMPPREDGAALPGFGYFASAPHSPSVPPRRGAEHPTRLQLSIGVGGRATDDKPQASALGAASATAARLNEEAREQLRLALAEKAAAEAARAQARRQAELAEQELASARRMRQQAQVELGRAHALRDHAVRQVDATLMQVTCYSCRGKFRARAGAVSTEVASYVSSVVTEGGDAEVDNDDDGLPSHGKMDMN