Information report for Zjn_sc00001.1.g05720.1.sm.mk
Gene Details
|
|
Functional Annotation
- Refseq: XP_020155452.1 — protein indeterminate-domain 1-like
- TrEMBL: A0A0E0EDM5 — A0A0E0EDM5_9ORYZ; Uncharacterized protein
- TrEMBL: A0A0E0I2V2 — A0A0E0I2V2_ORYNI; Uncharacterized protein
- STRING: OMERI07G17050.1 — (Oryza meridionalis)
- STRING: ONIVA07G18460.1 — (Oryza nivara)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Zjn_sc00001.1.g05720.1.sm.mk|Zoysia_japonica|C2H2|Zjn_sc00001.1.g05720.1.sm.mk
ATGACGCGCAACTCGATGGAGCCGGAGGCGGGGCACGAGCATCCGGGACCGGGTCCTGCGGAGGCGCCGTCGGCCGCGGCGCCGGTGAAGAAGAAGCGGAACCTCCCCGGGACGCCAGTGCTGCTCGCTCCTGCTGCTTCTGCGCCGTGTGCGCGGGCCGCAGATCCGGATGCCGAGGTGATCGCGCTGTCGCCGGGGACGCTGCTGGCGACGAACCGGTTCGTGTGCGAGGTGTGCGGGAAGGGGTTCCAGCGGGACCAGAACCTGCAGCTGCACCGCCGCGGGCACAACTTGCCGTGGCGGCTGCGGCAGCGGGGGCCGGGCGCCGAGCCGCCGCGGCGGAGGGTGTACGTCTGCCCGGTGCCGGGGTGCGTGCACCACTCCCCCGCGCGCGCCCTCGGGGACCTCACCGGCATCAAGAAGCACTTCTGCCGCAAGCACGGGGAGAAGCTCTGGGCGTGCCCGCGCTGCGGCAAGCGCTACGCCGTGCAGGCCGACGTCAAGGCGCACGCCAAGACCTGCGGCACCCGCGAGTACCGCTGCGACTGTGGCACGCTCTTCACAAGAAAGGATAGCTTCGTGACACATCGTGCGTTCTGCGGTGCTCTTGTGGAGGAAACTGGTCGGGCGTTAGCGGTACCTGCGCCGCCATCTCCTCGGCCGCCTGATTTGGAGGCTGAGGATAATGTGGACAAGGACAAAAAGAAGAGGGAGGAAAATGAGAATTCTGCTGTGGCTGAGAAAGAACAGCTGCCATGCGCCAAGGCGTTGGCGGAGAAGCCACAACACATTCAGTCACCACCTCCATTGCCACAGGAGCCACAACATAATCCGTCTTCGCCTCCATTGGCTCAGGAGCCACAGCCCCTTCACTCACGGCCTCCATTGACACAGCAGCCACAGCCACTTCGCTCAGGGCCTCCATTGCCTCAGGAACCAAAGCAACATCGCTCACGGCCTCTATTGACGCAGGAGCCACAGCCACTTCGCTCAAGGCCGCCACTGCCTCAGGAACCACAGCCACATTGCCCACGGCCTCCATTTCCAAAGGAGGAGCCAGTTGTGGCATTGGTGCCAAATGTGGAAGAGCCAAAAATGGTTGCTGAGCCAGCTTTGATTGCCAAGCAAGAGGAGGAAGCTGATGAAGATGAAGGTACCTGCCTCCAGGAAGCTGATCAATACAAGGATACTGAGCTTGAGAGTACTAATCTGCTATACAAAAACATGCCTATGCTTCCTTGCTTCCTCCCCTCGCCCTCAGAGGCCATTGGCACCGATGCCATCAGCACTACCTGCGGTGCAGGTGGCAGTGTTTCCAATTCCATCGCGCCATCCACAACAACAAACACTTTTGCTGGTTTGTTTGCATCAGCCACAAAAAGCACCACTTCCCAGAGCAGATCTCTGCGTGATCTTATTGGTGTTGATCCCACATTTCTTTGCCTTGCTATTGGTTCACCCTCCCCTCTGTTCCCACAGACAAATGCAAGCAGCCCCTGCACCTTCGCTCCACCTCAAGCACCGCACATGTCTGCGACCGCACTTCTGCAGAAGGCGACTGAGGTTGGAGCTTCACAATCTAGCTCATCGTTCCTTAAGGAGTTTGACCTTGGCTCTTCCTCCTCATCATCACTGCTGTCAAAGCCACCTCAAGGAAGGTTCAATGATAACAATACACAACAATGGCACCATCGGAGTAAACAGCAGGTCGAGATGGAACACTACTGGAGTAATCAGCGAATGGAGATGGAGCTCCCCCGAAGTAGTCAGCAAATGGAGATGGAGCTCCCCAGAAGTAATCAGCAAATGGAGATGGAGCATCGCTGGAGTAATCAGCAAATGGTGATGGAGCACAACTGGAGTAATCAGCAAATGGAGATAGGTCCCAGGTCAATGCTATCCAGCAGTCTAGGCCTTGATCTTGCATGCCAAAGTGGTAATTCAGGGTTGCCGGAGTTGATGATGGGACCCTCATCACTATTTGGTCCCAAGCCTGCTACTCTGGACTTCCTTGGGCTTGGCATTGGAGGGACCATTGGTGGCTCCACGGCCAATGGTGGCCTTCCAGCATTGATGGTGAGGGGAGAGCTGGATATGGGGTCTGCACAGACGCCCGCTCCATGGGAGGATGGCAAGAGGAAAACCAACGGCCGCACAATCCTGTGA
Protein Sequence:
- >Zjn_sc00001.1.g05720.1.sm.mk|Zoysia_japonica|C2H2|Zjn_sc00001.1.g05720.1.sm.mk
MTRNSMEPEAGHEHPGPGPAEAPSAAAPVKKKRNLPGTPVLLAPAASAPCARAADPDAEVIALSPGTLLATNRFVCEVCGKGFQRDQNLQLHRRGHNLPWRLRQRGPGAEPPRRRVYVCPVPGCVHHSPARALGDLTGIKKHFCRKHGEKLWACPRCGKRYAVQADVKAHAKTCGTREYRCDCGTLFTRKDSFVTHRAFCGALVEETGRALAVPAPPSPRPPDLEAEDNVDKDKKKREENENSAVAEKEQLPCAKALAEKPQHIQSPPPLPQEPQHNPSSPPLAQEPQPLHSRPPLTQQPQPLRSGPPLPQEPKQHRSRPLLTQEPQPLRSRPPLPQEPQPHCPRPPFPKEEPVVALVPNVEEPKMVAEPALIAKQEEEADEDEGTCLQEADQYKDTELESTNLLYKNMPMLPCFLPSPSEAIGTDAISTTCGAGGSVSNSIAPSTTTNTFAGLFASATKSTTSQSRSLRDLIGVDPTFLCLAIGSPSPLFPQTNASSPCTFAPPQAPHMSATALLQKATEVGASQSSSSFLKEFDLGSSSSSSLLSKPPQGRFNDNNTQQWHHRSKQQVEMEHYWSNQRMEMELPRSSQQMEMELPRSNQQMEMEHRWSNQQMVMEHNWSNQQMEIGPRSMLSSSLGLDLACQSGNSGLPELMMGPSSLFGPKPATLDFLGLGIGGTIGGSTANGGLPALMVRGELDMGSAQTPAPWEDGKRKTNGRTIL