Information report for XP_013902312.1
Gene Details
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Functional Annotation
- Refseq: XP_013902312.1 — putative DnaJ subfamily C member 21
- TrEMBL: A0A0D2JXE2 — A0A0D2JXE2_9CHLO; Putative DnaJ subfamily C member 21
- STRING: A0A087SM56 — (Auxenochlorella protothecoides)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brassica napus: GSBRNA2T00074731001
- Brassica rapa: XP_009128038.1
- Citrus sinensis: orange1.1g007551m
- Manihot esculenta: Manes.06G085000.1.p
- Medicago truncatula: Medtr4g109510.1
- Nicotiana tabacum: XP_016505864.1, XP_016489214.1
- Raphanus raphanistrum: RrC232_p2
Sequences
CDS Sequence:
- >XP_013902312.1|Monoraphidium_neglectum|C2H2|XP_013902312.1
ATGGGGCGGTGCCTGTACGAGATCCTTGGCGTGGAGCGCGACGCGGACGATGATGTCTTGAAGAAGGCATACCGCAAGCAGGCGCTCATCTGGCACCCAGACAAGAACGCGCATCGGGCCGAGGAGGCGCACGAGCGGTTCCAGGAGATTTCTAACGCTTATGAAGTGCTGTCAGACAAACACGAGCGCGCCTGGTACGACTCCCACCGCGACCAGATCCTCCGCAGCGGCGTGCGCCACCAGGCCGGCGGGGACGGCGGTTTTGAGGGTGGGGAGCGGCCCGAGGAGGAGGAGGAGCTGTTCAGCCACTTCAGCAGCGCCTGCTACAGCGGCTTTGGGGACGATGCCAAGGGCTTCTACGCAGTCTACTCCGCCATATTCTCAAAGCTGGCAGAAAAGGAGGCGGCCGCCTTCAAGGCGGACGACTCCCGCGCCGGCCGCAGCCCGCCGGCCTTCCCTGCGTTCGGCACCGCCTCCTCAGGCGGCCCGGAGGTATATGCGTTCTATGCTTTCTGGTCAAACTTCACTTCATACAAGGACTTTGCGTGGGCGGACCAGTACAACCCAGCCACCGCCGACAACCGCCAGATCCGCCGCAAGATGGAGGAGGAGAACAAGAAGACGCGCCGCGCGGCGAAGCGCGAGTACGTCGACACAGTGCGCGAGCTGGCGGCGTTCGTGCGGAAGAGGGACAGGCGCCTCGCCAAGTTCCAGGCCGAGGAGGCGGCGAAGCGCGCCGAGCGCGAGGCTGCGGCGGCGGCGAAGCGCGAGGAAGAGAAAGCGGCGCGGCTGGCTGCGGCGGCGGCGTACAAGGAGCCCGAGTGGGTGCGGCAGAGCGAGGCGGCGGCAGAGGACGAGAGCGAGTCGGAGGAGGAGGACCTGCCCGAATTCTACTGTGTGGCCTGCGAGAAGGTCTTCAGATCCGCCGGGCAGCTGGCCAGCCACGAGCGGTCGAAGAAGCATCTGGAGGCGCTGGCGTCGCTGCGGGAGCTGCTGGAAGACGAGGAGGCAGATCTGCTGTTGAACGGCGGCGGCAGCGGCGCTGGTGGTGCTGATGGTGCTGGTGGTGAAGGGGTTGGGGCGAAGGAGGAGGGCGAGGAGGAGGCAGGAGGCGGCGGCGGCGGTGGCGGCAGGGGCAAGAAGCAGAAGAAAAAGCGGCGGCAGCAGCAGCAGCAGCAGAGGCGGCACGAGGAGGCGGAGGGGGAGGGGGAGGAGGCAGGCGCCAGCGGCAGCGGTGGCGAGGGGAAGCAGCGAGGGGGCGGCAAGGAGGATGGGGCGGAAGTGCAGGAGGAGGAGGAGCAGGGTGGCGAGGGGGAGGATGAGGCGGCGGCGGCGGCTAGCTGGGCGGCGCAGTGGCAGAAGCAGCGGCAGAAGAAGGGGCGGCGCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGGCCGACGAGGCGGTGGAGGATGGCAGCAGCGGTGAAGGCGGAGAGAGCGACCAGGACGATGGCTCGGCGGCAGCAGCGGCCACGGCAGCATCTGGCTCTGGGATGGAGGAGGAGGAGGAAAAGGAAGAGGAGGCGGAGGCGGAGGAGGGGTCGTCCGAGGGAGCGGGTGGGGACGAGGCTGATGAAGAGGAGGAAGGCATCACCAGCAGCAGCGGGCGCTTGGCCGAGGATTTGGAGGGGTTGGAAGTGGGCGGCAGCGGCGGCGGCGGAGGTAAACGCAAAGGCAAGGGCGCGAAAGCCGCCAAGGCTGCGGCGGCCAACGGCGCCAAGCCGCCGCCCGCCGCGCGCGCCGGTGGCAGCAGCGCAGGAGCAGCGGCGGCGGCGGCGGTGGACGGCGCCGACAGCGGCAGCGGCGGGGAAGGGGAGGGGGAGGGCTGGGATGGCGACCACGGTGACCCTCGCGTGCGCCGCGCGGCCGCCAAGGGCGACAAGCGGCGCTCGCGGGCGGCCAAGAAGGCGCAGGCCGAGGCGGAGGCGGCCGGCCTCGCGTGCCAGGTGTGCGGGGCCGCGTTTGGCAGCCGGTCAAAGCTGTTCAAGCACATCCAAGAGGAGGGGCATGCGGCACTGAAAAAGTAG
Protein Sequence:
- >XP_013902312.1|Monoraphidium_neglectum|C2H2|XP_013902312.1
MGRCLYEILGVERDADDDVLKKAYRKQALIWHPDKNAHRAEEAHERFQEISNAYEVLSDKHERAWYDSHRDQILRSGVRHQAGGDGGFEGGERPEEEEELFSHFSSACYSGFGDDAKGFYAVYSAIFSKLAEKEAAAFKADDSRAGRSPPAFPAFGTASSGGPEVYAFYAFWSNFTSYKDFAWADQYNPATADNRQIRRKMEEENKKTRRAAKREYVDTVRELAAFVRKRDRRLAKFQAEEAAKRAEREAAAAAKREEEKAARLAAAAAYKEPEWVRQSEAAAEDESESEEEDLPEFYCVACEKVFRSAGQLASHERSKKHLEALASLRELLEDEEADLLLNGGGSGAGGADGAGGEGVGAKEEGEEEAGGGGGGGGRGKKQKKKRRQQQQQQRRHEEAEGEGEEAGASGSGGEGKQRGGGKEDGAEVQEEEEQGGEGEDEAAAAASWAAQWQKQRQKKGRRKQQQQQQQQQQQQQQQQQQQQQQQQQPADEAVEDGSSGEGGESDQDDGSAAAAATAASGSGMEEEEEKEEEAEAEEGSSEGAGGDEADEEEEGITSSSGRLAEDLEGLEVGGSGGGGGKRKGKGAKAAKAAAANGAKPPPAARAGGSSAGAAAAAAVDGADSGSGGEGEGEGWDGDHGDPRVRRAAAKGDKRRSRAAKKAQAEAEAAGLACQVCGAAFGSRSKLFKHIQEEGHAALKK