Information report for XP_010537171.1
Gene Details
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Functional Annotation
- Refseq: XP_010537170.1 — PREDICTED: uncharacterized protein LOC104811971 isoform X1
- Refseq: XP_010537171.1 — PREDICTED: uncharacterized protein LOC104811971 isoform X1
- Refseq: XP_010537172.1 — PREDICTED: uncharacterized protein LOC104811971 isoform X1
- TrEMBL: V4MP25 — V4MP25_EUTSA; Uncharacterized protein
- STRING: XP_010537170.1 — (Tarenaya hassleriana)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT4G25610.1, AT4G25610.2
- Brassica napus: GSBRNA2T00149649001, GSBRNA2T00157580001
- Brassica oleracea: XP_013599788.1, XP_013599780.1
- Brassica rapa: XP_009139354.1
Sequences
CDS Sequence:
- >XP_010537171.1|Tarenaya_hassleriana|C2H2|XP_010537171.1
ATGGCAATTGCAAAATCCAACCCGTATAACTCCATGGACCTGGTGAAGCAAGATGGAAATGATTCTCTAGATATGCTCATCAGGCGTGCAGTTGGAAAGGAGCCCTTTCTTTCCTTCCCTAGGCCTGAAAATAATCCTGTCCAGTTGTTCCAACTTCTCCATGCCTTTGATCAACCAGAGGTCTCGGGCTGGCCATTGCTTACCCCTTTGAAGGTACAAATGCAGAAGTGTGAGAAGTGCTCTAAGGAATTTTGTTCACCTGTTAACTACAGGAGACATAGCCGCTTGCATCGTCGTTTAAGAAAGCCTGACAAGGATTCTGGCAAAGATAGGAACATCCTGGGAGCCTTCTGGGATAAGCTCTCTGTAGATGAGGCAAAGGGGATTCTCTCATTGAAGGGCATGGCGCTGGAGGAAGTATCTGGGTCATCTGTTGAGTCAGCATTAATGACCCTTATTCAAAAACCAGGATTTATTGCGCTGCCACAATATTATCTTAGAGCTGGTTCTGACGTTTTGGATATTATCCAGGCTAGACCATCTAGATTTCCAGTATCTTCGCAAGAACTGTTCAATATTCTTGATGAGGCTAGTGAAAAAACATTCCTGTGTGGTGCGGCTGCATCGATGCAAAAATATATTTTTGATGGTGAAACTGGGAAAAGCGCACTGGAGGCAAAGAATGTTGTTGCTTGCGCAAGCTTCCTTCTGGAACAGAAACTTATTAAAGCATGGCTTGCTGACAAGGATGCAGAAGCATTATGGTGCCAGAAGTTACTGGTTGAAGAGGAAGAAGCCGCTCAAAGAAGACGAGCTGAACTCCTGGAGAGGAAAAGGAGGAAGAAGCTCAGGCAGAGAGAACAGAGAGTGAAGGAACAGAGGTCCGAACAGAAAGAAGATTCCAAGGATAGTGGGAGTACTACATCAGAGGAACAGCAAGATCCAGCTGAGTCATCAAGTCCATTGTCTGTAGCTTCAAATTCTGAGGCACAAAGACCAGATGGAATTCCAATGGAGGATTCTTCGGAAACAAACGGTAGTGGAAACTGCGAAACTCGAGCACTGGTTAGCCACAGTGCTCATGATGATGGTTTGGGTAATAATGGCTGTATCATGGAAAGGAAAGGTGGTCGGAGGCGAATGGGTGGATTTGTTCCTTCAAAATCACGACGGGAAATGCCTAATGGGTTCCACTCTAATCTGGGTTCTCATGTACCGAAACTTGGAGGTATGTCGAAGAATGGAACTAACAGAGAAACAAGAGCATCAGCAATAGTCAACACCGCTAAAGTGTGGAGCCGAAAAACAGATAACCCGAGATCTATATCGCTGGATGAGTCTGTAACTAAACCGGATCAGACTAAGAAGAGCGAAGTCATGATCGGGTCAATATCTGTAACTATTGGAAGCGGTGGAGGAAACAACCAGACGGGTAGCAGTGAAGATGATGGCAGGACAAAGAATGATCAGGTGAAACCTCTTCCAGAGCAACCGGCTGTAAAAATATGGAGGCCGGTGAGCAGGCATGGAACCAAACCGTCGAAACAAATTGAAAATGCAGACAAAGATTCGATTCTCGGAAGCAACGGGAACAAGAACATATCACATGTCGAAGAAAAGATCACGAATAATGGAAGCTTGCAGTTCAACATCTGCGAAGCAAAGGCATTTCTTGCAGAGAGATGGAAAGAGGCGACTTCGGTGGAACACGTGACATTGGCTCTGTCTGAAGAGGACGACGCCATTGATCCGACGAAAGAGGTAGTAGTAATCGCCAGATCAAAGTCGAGAGTGAAACCCGACAAGGCTGCGAACAAGATGAAATTTTTCACGAGGGAAAACAGAAGACAAAACCCCCAAGAGAAAAAGAAAGTCATCATTCTTTTCCCCTTTCTGCTTTGCCTCGCAGGGAGAGGATTACTGAATTCATTGCAAGTCAAAAGGCTTTCTATGGTTTTCTCTTTCGTTATTATTCTATTTCTGAGTAAATAA
Protein Sequence:
- >XP_010537171.1|Tarenaya_hassleriana|C2H2|XP_010537171.1
MAIAKSNPYNSMDLVKQDGNDSLDMLIRRAVGKEPFLSFPRPENNPVQLFQLLHAFDQPEVSGWPLLTPLKVQMQKCEKCSKEFCSPVNYRRHSRLHRRLRKPDKDSGKDRNILGAFWDKLSVDEAKGILSLKGMALEEVSGSSVESALMTLIQKPGFIALPQYYLRAGSDVLDIIQARPSRFPVSSQELFNILDEASEKTFLCGAAASMQKYIFDGETGKSALEAKNVVACASFLLEQKLIKAWLADKDAEALWCQKLLVEEEEAAQRRRAELLERKRRKKLRQREQRVKEQRSEQKEDSKDSGSTTSEEQQDPAESSSPLSVASNSEAQRPDGIPMEDSSETNGSGNCETRALVSHSAHDDGLGNNGCIMERKGGRRRMGGFVPSKSRREMPNGFHSNLGSHVPKLGGMSKNGTNRETRASAIVNTAKVWSRKTDNPRSISLDESVTKPDQTKKSEVMIGSISVTIGSGGGNNQTGSSEDDGRTKNDQVKPLPEQPAVKIWRPVSRHGTKPSKQIENADKDSILGSNGNKNISHVEEKITNNGSLQFNICEAKAFLAERWKEATSVEHVTLALSEEDDAIDPTKEVVVIARSKSRVKPDKAANKMKFFTRENRRQNPQEKKKVIILFPFLLCLAGRGLLNSLQVKRLSMVFSFVIILFLSK