Information report for XP_010530149.1
Gene Details
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Functional Annotation
- Refseq: XP_010530148.1 — PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1
- Refseq: XP_010530149.1 — PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1
- Refseq: XP_010530150.1 — PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1
- Refseq: XP_010530151.1 — PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1
- Refseq: XP_010530152.1 — PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1
- Refseq: XP_010530153.1 — PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1
- Swissprot: Q9C8N5 — STOP1_ARATH; Protein SENSITIVE TO PROTON RHIZOTOXICITY 1
- TrEMBL: D7KK61 — D7KK61_ARALL; Zinc finger family protein
- STRING: XP_010530148.1 — (Tarenaya hassleriana)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0010044 — Biological Process — response to aluminum ion
- GO:0010447 — Biological Process — response to acidic pH
- GO:0005634 — Cellular Component — nucleus
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT1G34370.2, AT1G34370.1
- Brassica napus: GSBRNA2T00153328001, GSBRNA2T00084053001
- Brassica oleracea: XP_013605287.1
- Brassica rapa: XP_009107928.1
- Manihot esculenta: Manes.18G099800.1.p
Sequences
CDS Sequence:
- >XP_010530149.1|Tarenaya_hassleriana|C2H2|XP_010530149.1
ATGGATACCGACGAGGATCTGTGCCAGAACAATTGGGGGAACTCTTCTTCCATAGGTGAGAAACTGCCCGAACCGGGTTCTTCTGGAAATAACAGGTCCTTCACAGCATCTGCATCGCAGCAGAAATGGGAAGACACGTCTATCTTAGACTTCGACATGAGAATCGAGCCTGGCATGCAAATGTTTGGTCAAATGAAAGATCCTGGCCAAGATAACAGTCAAGTGAACAATGATCCTCTGCAAGGAGGTAAGGTGCAGACTTGGGACCCGAGAGCAATGCTGAACAATCTATCCTTTTTGGAACAGAAGATCCACCAGCTTCAGGATCTCGTTCATCTGATAGTTGGGCGAGGTGGGCAGCTTGTGAGCCGTCCGGATGAACTCGTGGCTCAGCAACAGCAGCTTATAACCGCAGATCTTACTTCCATAATCATACAGCTGATTTCCACTGCAGGCAGTCTTCTTCCATCTGTTAAGAATAATATGTCAACGCTGGGTCCATATACTGGACTGCCTGGTTCAGCCCTGTTTCCCTACTATGCAAGGGAAACTGATAACTTTGGCTCACAGACTCAACTAAAAGACAACTGTGGTGCCCAAGACTCTGATTTGTCTAAACGGATTGATCCTTCTGGCGATTCAAAGATTGATGAGAAAGATAGCCATGTTGTGGAAGAACATGAAATGAAAGACGAAGATGATGTAGAGGAAGGAGAGAACCTTCCTCCGGGTTCATACGAGATATTGCAGCTGGAGAAAGAGGAGATTCTCGCACCACACACACATTTCTGCACGATATGCGGGAAGGGTTTCAAAAGAGATGCGAATCTGAGAATGCACATGAGAGGCCATGGGGATGAGTACAAGACACCGGCTGCTCTTGCTAAGCCACACAAAGAATCCGGTTCTGGGTCTGAGCCGATTCTGATAAAGAGATACTCGTGCCCATTCCCCGGCTGCAAACGCAATAAGGATCACAAAAAGTTTCAGCCTTTGAAGACAATCCTATGCGTGAAGAACCATTACAAACGCACCCACTGCGACAAAAGCTTCACTTGCAGCCGATGCCATGCCAAGAAGTTCTCGGTCCTCGCTGATCTCAAGACACATGAGAAGCACTGCGGGAAAAACAAGTGGCTCTGTTCCTGCGGGACCACGTTTTCAAGGAAAGACAAGCTCTTTGGCCACATTGCTCTGTTTCAGGGCCACACTCCTGCAATCCCGGTGGAAGAGGCAAAACCGTCATCTGGACAGAGAGACACCTTTGAAGCTGTGAACGACAACCCGGGAATGGTGAGTTTCAGTTTCGGAACTTCAAACGCTGTTGATCGGGAAACCACACAGCCCGGAATCTTGGAAATGAAAGGGAACTTTGATGTTTCTTCCAACTGTTTTTCGCCTCTGATGAGCTTCGATACATTCGGAGGCTTCCATGAATTCCCAAGGTCGATGTTCGATGATTCAGACAGTTCTTTTCAACTGCTTATTTCAGGTGCCTGTGGTTTCTCACCAAGAAATGATGGTGGTTCTGTCTCAAATAGTAATCTCTAA
Protein Sequence:
- >XP_010530149.1|Tarenaya_hassleriana|C2H2|XP_010530149.1
MDTDEDLCQNNWGNSSSIGEKLPEPGSSGNNRSFTASASQQKWEDTSILDFDMRIEPGMQMFGQMKDPGQDNSQVNNDPLQGGKVQTWDPRAMLNNLSFLEQKIHQLQDLVHLIVGRGGQLVSRPDELVAQQQQLITADLTSIIIQLISTAGSLLPSVKNNMSTLGPYTGLPGSALFPYYARETDNFGSQTQLKDNCGAQDSDLSKRIDPSGDSKIDEKDSHVVEEHEMKDEDDVEEGENLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKESGSGSEPILIKRYSCPFPGCKRNKDHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHAKKFSVLADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPVEEAKPSSGQRDTFEAVNDNPGMVSFSFGTSNAVDRETTQPGILEMKGNFDVSSNCFSPLMSFDTFGGFHEFPRSMFDDSDSSFQLLISGACGFSPRNDGGSVSNSNL