Information report for XP_010087948.1
Gene Details
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Functional Annotation
- Refseq: XP_024024052.1 — origin of replication complex subunit 5
- Swissprot: Q6EWX0 — ORC5_ARATH; Origin of replication complex subunit 5
- TrEMBL: W9QP90 — W9QP90_9ROSA; Origin recognition complex subunit 5
- STRING: XP_010087948.1 — (Morus notabilis)
- GO:0006260 — Biological Process — DNA replication
- GO:0009744 — Biological Process — response to sucrose
- GO:0000808 — Cellular Component — origin recognition complex
- GO:0005634 — Cellular Component — nucleus
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Cicer arietinum: XP_004498336.1
- Gossypium arboreum: Cotton_A_03996_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A05G2341, Gh_D05G2606
- Manihot esculenta: Manes.02G195200.1.p, Manes.02G205100.2.p, Manes.02G205100.1.p
- Nicotiana benthamiana: Niben101Scf11689g02014.1
- Oryza sativa: OsORC5
- Populus trichocarpa: Potri.019G081100.1
- Prunus persica: Prupe.4G066100.1.p
Sequences
CDS Sequence:
- >XP_010087948.1|Morus_notabilis|C2H2|XP_010087948.1
ATGGGCAAGGAGGAAAGCCCACAAATTACAAGAAGAACAACAAGGTACTCTTCAGCTGCCGTTTTGAAAAATTCAGTTGAAACTAAAGCAAGTGATACAAACCTTCCAAGTCTAAACGACCTTTTGTATGGAGAGGAAGGGAAACCCATTAGCCTGGATGATGTGTTATCTAGTTTCCCAGGTCGAAAAATACAGATTCTAGAGCTTATGCATATTTTGGGTCCTGTGAATTGCCCCATGGTTCCTCTCTTTATCTATGGAGGCACTTTTACTGGGAAAACGAGCATCACTCTGCAGATATTTAGGCATCTTAATCGGCCGTTTGTTTATTCGGGTTGCCTTACCTGTTATAATCCAAGAATCTTGTTTGAATCTGTTTTGAACCAGCTGTTGCTTCACAGGAAGAATGAGGCTAATGGTTATTCAAGTGCAAAACGCTGCGAAAGGCCATCTGATTTCGTTAATTTTCTTCGTGAAGCATTGGTTAGCGTCACGACTAGTCTTCGGGGGAATTCAGGAAAATCTGGTTCTAAAAAATCAGACAAGCGAGCTAATGGGAATATGGTCTACTTGATATTTGACAATTTGGAGCTTGTTAGAGAGTGGGATAAGAGTTCTACCATATTACCATTTTTGTTTAATCTCTATGATATTCTAAAAATGCCAGAATTAGGTCTGATCTTCATTAGCAATACTTCACCTGATACATATTACTCAAATATGGGTTACGTGGAGCCTACCCCTTTATATTTTTCTGATTATTCAGAAGATGATCTTCGTCAAATCTTCATGCGAAACCAAGAAAACAAGAAGCTTTATTCATCCTTTTTAGAGGTTGTGCTTAGGCCTTTCTTCCGTATTACTAGACGGGTAGATGAATTATCTACCGCCTTTTCACAATTATATAAGAAGTACTGTGAGCCTTTAAGTGATCCAGGAGTAGTTCCCAATGAAGAAATGAAAAGAAAGTTGTTTAGTAATCTTCAACCGCATATTCCTCCATCTATGAATGATATATTTAAAGTTTCATCTCAGCCTTCTACTAAAGTTGGGGCCACCAAGGAGGCAAAGTGGAAAAGTGGCACAAAAAGATCGGGAGGTTTTGAAGCTATCGATCAATTAGATCTCCATATGTCCACTTCTGCCAAGTATCTTCTTCTTTCAGCATTCCTTGCTTCAAGAAATCCGGCTACTCTTGACGCATCACTGTTTGATTCTACTGGGGGTTCTGACAATCGGAAGCGAAAGAGGAAGCCATCTGAGAAATCATTGGAACAGAAGGAAGCAGTAGAACAGGACTTACTTATGAGAGGACCTGGAACTTTTCCATTGGAGAGACTGTTAGCCATATTTCAGTGTATTACATCATTAGCCGAAGGTTTACTTGAAGAGGAAGAACAAGGAAATGATGGTCTCGGAGTTCAAGGTTACGACAATAGCCTCATGTCTGACGTTCTCTTGCAACTATCCAGTTTATGCAATGCCAACTTTATTGTCAAAGGAGGAAGCTGCCCGCTAGAGGGCTCAACTCGATACCGATCTACAATATGTGAAGATCTGGCTTTGAAGAGTAAGCAGAAGTTTTTAGGTGGAATCTGCAAATCCAAATGGCTAGAAAATGATGAAATGGAGAAGAGGGCCGAGACAGAAGAGACAAAAGAAGGTGTAAAACAAACAAATACTTGCGAAAAATGTGGTGCTAGCTTCAAGAAACCTGCATATTTGAAGCAACACACGCGAAGCCATTCCGATGAGAATTACAAGGACGCGCGGGAACCGGTCAGGCCTGATTTGCCCGAACTGGCCAAAGCCCGAAACCCGACCAACGGATAA
Protein Sequence:
- >XP_010087948.1|Morus_notabilis|C2H2|XP_010087948.1
MGKEESPQITRRTTRYSSAAVLKNSVETKASDTNLPSLNDLLYGEEGKPISLDDVLSSFPGRKIQILELMHILGPVNCPMVPLFIYGGTFTGKTSITLQIFRHLNRPFVYSGCLTCYNPRILFESVLNQLLLHRKNEANGYSSAKRCERPSDFVNFLREALVSVTTSLRGNSGKSGSKKSDKRANGNMVYLIFDNLELVREWDKSSTILPFLFNLYDILKMPELGLIFISNTSPDTYYSNMGYVEPTPLYFSDYSEDDLRQIFMRNQENKKLYSSFLEVVLRPFFRITRRVDELSTAFSQLYKKYCEPLSDPGVVPNEEMKRKLFSNLQPHIPPSMNDIFKVSSQPSTKVGATKEAKWKSGTKRSGGFEAIDQLDLHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGSDNRKRKRKPSEKSLEQKEAVEQDLLMRGPGTFPLERLLAIFQCITSLAEGLLEEEEQGNDGLGVQGYDNSLMSDVLLQLSSLCNANFIVKGGSCPLEGSTRYRSTICEDLALKSKQKFLGGICKSKWLENDEMEKRAETEETKEGVKQTNTCEKCGASFKKPAYLKQHTRSHSDENYKDAREPVRPDLPELAKARNPTNG