Information report for XP_008220979.1
Gene Details
|
|
Functional Annotation
- Refseq: XP_008220979.1 — PREDICTED: protein indeterminate-domain 5, chloroplastic
- Refseq: XP_016648019.1 — PREDICTED: protein indeterminate-domain 5, chloroplastic
- Swissprot: Q9ZUL3 — IDD5_ARATH; Protein indeterminate-domain 5, chloroplastic
- TrEMBL: M5XVM9 — M5XVM9_PRUPE; Uncharacterized protein
- STRING: XP_008220979.1 — (Prunus mume)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >XP_008220979.1|Prunus_mume|C2H2|XP_008220979.1
ATGGCTGCGTCTTCTTCGTCGGTCGAACCGCTTTTCGGAATTAGAGAAGAAGATCAAAACCAGCAGATGAAGCAGCAACATTCCTCTACACCGCCAACCTCGTCCACAGCTGCAGCAGCTGCTCCACCTCAGAAGAAAAAGAGAAACCAACCTGGAACACCAAATCCAGAAGCAGAAGTGATAGCACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTCATATGTGAGGTATGCAACAAAGGCTTCCAAAGGGAGCAGAACCTACAGCTCCACAGAAGAGGACACAACCTGCCTTGGAAGCTCAAGCAGAAGACTACAAAAGAACCCAAACGCAAAGTCTACCTGTGCCCCGAGCCCACATGCGTCCACCACGACCCCTCCCGAGCTCTGGGTGACCTCACCGGCATCAAAAAGCACTTCTCTAGAAAGCACGGCGAGAAGAAATGGAAGTGCGAGAAGTGCTCCAAGCGCTACGCCGTGCAGTCCGATTGGAAGGCCCATTCTAAGACTTGTGGAACTAGAGAATACAGATGTGACTGTGGCACTCTCTTCTCAAGGCGGGACAGTTTTATCACGCACAGGGCCTTCTGCGATGCACTGGCTCAGGAAAGTGCAAGGCATCCGCCCAGTTTGAGCACCATTGGCAGCAGCTTATATGGGGGCAGCCTCAGCAACACTGGCCTCGGCTTATCTCATCAAGTTGTGGGCCCACCTCAAATTTCCTCACTCCAGCAAGACCACAGTCAATCCAGTACAGCTGCTGACATCTTAAGACTTGGTGGTGCGGGTGCTGCTGGCGCTGCTCGGACCGGACAATTCGATCATCTCCTGGGCTCATCTTTTCGACCAGCTGCACAGTCCTCAGCATCTTTCTTCTTGACTGCCGCTGATCAGTCCACCCAACAACAATACCATGATCATGATCAGGACAAGTCATTCCAGGGCCTCATGCAATTCTCTGATAATCATCATCATCATCATCATCATCTTCACCAGAACAACAACAACTCAAACAACCCACCTCATCATCACTCAGCAGGAGCCAATCTATTCAGCCTACCTTTCCTTTCCAACAACACCACCAATACTACTAATAATAACAACAGTGCCACCAATAACAATTTACTAATTAGTCCTGACCATTTCAACACCAATGTAAATGGCACTACCACCGCTGCCGGGGGCAGTGAAGGTTCACATAATCTCTTCTCCGGTCACATAGTGGGCGGTGATCATATTAGCACCGGGATACCTTCTCTCTACAGCACTAATAGTAATATTAATAATAATAATCAGCAGCAGCAGCAGCAGCATGCATCTATGGCGCACATGTCAGCAACCGCACTGCTTCAGAAGGCTGCTCAAATGGGCTCCACCAATTCAAGCAACAACACCACTGCCTCGCTGCTTCGGAGCTTCGGCAGCTCCTCCTCAGCCACTGCTAAATCCGACAGGCCCGGGGCGCTGGTTCCTTCCAGCTTAGGTGGCATGTTCGGAAGTGATCAACACGACCAGAGCCACCTGCAAGACCTAATGAACTCGTTTGCTAATACTGGTGGCTCATCCATTTTTGCAAATGCGTCGTTTGGTGGCTACGATGCTGCAGCAGCAAATAGGGCTATTAACATGGAGGAGACAAAGTTGCAGCAGCAGAACAGTCTGGGGGTGAGCAACATTGGAGGGGCTGATAGGTTAACAAGGGACTTTCTTGGGGTTGGACAGGTGGTGAGGAGCATGAGCGGGGGGTTTTCTCATCAGAGATCAGAGCATCATAGTGAACAGCAGCATGGAATGGACATGAGCTCATTGGATTCAGAAAGCAATGCTGCAGCTGCAGCTGCGCCGTCAAGCCAATCTTTTGGAGGAGGTGGGAATTTTCAGTGA
Protein Sequence:
- >XP_008220979.1|Prunus_mume|C2H2|XP_008220979.1
MAASSSSVEPLFGIREEDQNQQMKQQHSSTPPTSSTAAAAAPPQKKKRNQPGTPNPEAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHPPSLSTIGSSLYGGSLSNTGLGLSHQVVGPPQISSLQQDHSQSSTAADILRLGGAGAAGAARTGQFDHLLGSSFRPAAQSSASFFLTAADQSTQQQYHDHDQDKSFQGLMQFSDNHHHHHHHLHQNNNNSNNPPHHHSAGANLFSLPFLSNNTTNTTNNNNSATNNNLLISPDHFNTNVNGTTTAAGGSEGSHNLFSGHIVGGDHISTGIPSLYSTNSNINNNNQQQQQQHASMAHMSATALLQKAAQMGSTNSSNNTTASLLRSFGSSSSATAKSDRPGALVPSSLGGMFGSDQHDQSHLQDLMNSFANTGGSSIFANASFGGYDAAAANRAINMEETKLQQQNSLGVSNIGGADRLTRDFLGVGQVVRSMSGGFSHQRSEHHSEQQHGMDMSSLDSESNAAAAAAPSSQSFGGGGNFQ