Information report for Vradi11g05250.1
Gene Details
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Functional Annotation
- Refseq: XP_014520854.1 — histone-lysine N-methyltransferase SUVR5
- Refseq: XP_014520855.1 — histone-lysine N-methyltransferase SUVR5
- Swissprot: O64827 — SUVR5_ARATH; Histone-lysine N-methyltransferase SUVR5
- TrEMBL: A0A1S3VRE2 — A0A1S3VRE2_VIGRR; histone-lysine N-methyltransferase SUVR5
- STRING: XP_007156871.1 — (Phaseolus vulgaris)
- GO:0006342 — Biological Process — chromatin silencing
- GO:1900109 — Biological Process — regulation of histone H3-K9 dimethylation
- GO:0005515 — Molecular Function — protein binding
- GO:0043565 — Molecular Function — sequence-specific DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Glycine max: Glyma.01G180100, Glyma.11G062100, Glyma.16G143100, Glyma.02G060500
- Gossypium hirsutum: Gohir.A02G162200, Gohir.D03G018200, Gohir.A02G162100
- Juglans regia: Jr12_01690, Jr07_03090, Jr12_01700
- Manihot esculenta: MANES_13G134300
- Medicago truncatula: Medtr5g018850
- Populus trichocarpa: POPTR_007G033000v3, POPTR_005G129800v3
- Prunus avium: Pav_sc0000348.1_g900.1.mk
- Prunus persica: PRUPE_7G146600
- Rosa chinensis: RchiOBHm_Chr2g0103021
- Vitis vinifera: VIT_04s0023g00980
Sequences
CDS Sequence:
- >Vradi11g05250.1|Vigna_radiata|C2H2|Vradi11g05250.1
ATGGAAGTGCTTTGTTCTGGTGTTCAATATGCTGGGGAGTCTGATTGTGCTCAGCAGAGTTCAGGAACTGCTTTTGTATATCAAGAAGAAACTAATTGTGCAGAAAGTGGTGGGCAAGACAAACTGGTAGCTGGTCTGCTGAACGAATCATCACATAAAATGCAAGGGCCTCAAATAGAAAGGCAAGGTGGTTTGTCAACTAATTCAGATTGCCAATGCATTGGAGCTTCATGTTGTGACTGTCAAGTGGATGATCAAAATGAATATTGTGGTTTCCATGATTTTGAAGAAGACATTATGAATGAACCTTGTTTAACATCTGACAACTCTATCTCTGTTGTTGATACAATTGAAAGTGAATCACCAAACAACAGTCGGGAAGGAGACTTGTCATGTTCTGAACCCAAGTGGCTTGAGGGGGATGGATCAGTGGCATTGTGGGTCAAGTGGAGGGGGAAGTGGCAGGCTGGTATCCGGTGTGCAAGGGCTGACTGGCCGTTATCAACGTTGAAAGCAAAACCAACACATGAAAGAAAGAAATACTTTGTTATATTCTTTCCACACACAAGGATTTATTCTTGGGCAGACATGCTGCTCGTTAGATCAATTAACGACTTTCCCCATCCCATTGCATATAAGACTCATCAGGTGGGACTCAAAATGGTTAAAGACTTAACTGTAGCACGGCGGTTTATTATGCGAAAGCTGGTTGTTGGCATGCTGAACATGGTCGACCAGTTTCCTTTTAATGCTTTGACAGAAACTGCTCGTGATATGAAGGTCTGGAAGGAGTTTGCCATGGAGGCTTCTCGTTGTAATGGTTATTCTGATTTTGGGAGAATGCTTCTAAAGCTGCATAGTAGCATACTGCAGCACCATATAAATGTTGACTGGTTCCGGCATTCTTATACCTCTTGGACTGAAAGATGTCAGAGTGCCAATAGTGCTGACTCAGTGGAGCTACTGAAGGAGGAATTGTTTGATTCTATTTTGTGGAATGGGATCAATACTCTCTCTGATGCACCAGTGCAATCAACATTAAGTTCTGAATGGAAAACCTGGAAGCATGATGTAATGAAATGGTTTATGACACCACCTTCCTTATCGATCAGCAAAGACACACAGCAACAGAGTTATGATGATTTGTTCCCAGCAAACCTTCAGGTTTGTAGAAAAAGGGCCAAGCTTGAAGTTCGTCGTGCAGATACACATGCTTCACAAGTGGAAATCAAGGCTCAAACTGTTGCTCTTCAGGCTGACCCTGGCTTCTTTAAGAATCAGGGCATATTGAGCACATTAGCAGATGAGTCTTGCAAACAGGAAGGTGTTAGGGAGGTGTCTATGGCAGCTGATTCACCTGGTCATTTGGTCGATAAATGGAATGGAATTGTAGTTGAGAATACTGATCCGCATTTTTTGCATACCACACCTACAAAGGAAATGACTGTTGCAAAATCTGTAGAATCTGGTAGTAAGAATCGACAATGCATAGCTTATATTGAAGCAAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTGTACTGTTGTGTACATCTATCTTCCCGATTTTTGGGGAGCTCAACGAAAACTGAAAAGCCTGTTCCACTTGATACTCCTATGTGTGAAGGTACTACTGTTCTGGGTACTAGATGTAAGCATCGTGCCCTACCTGGCTCTTTATTCTGTAAGAAACACCGGCCACATGCTGAAACAGAGCAGATCTCAAATATACCACAGAATACACTAAAGAGAAAACATGAAGAAAATTATACCGGTTCAGAGGGCATTCTCTCGAGAGACTTGGTATTAGTCAATGTTGAAAGTCCACTGCAAATGGATCCAGTGTCATCCATTGGTGGTGATTCCGTCTATGGAGAAAACAACTCTAATGAGAAGCCCATGCATTCTGAACATTATCATAATGCAATGGAGTCACTGCAGTGTATAGGTTCCCCTCCCTATGATAAGATGAATCCTTGCAGGGAAGGTCCTAAACGGTATTGCTTGTATTGTGAAAGTCACCTCCCTAGTTGGCTTAAGCGTGCAAGAAATGGGAAGAGTAGAATAGTATCAAAAGAAGTGTTCACAGAACTTTTGAGGGACTGCAACTCATGGGAGCAAAAGGTACATCTGCATAAAGCATGTGAACTTTTTTACAGGCTTCTTAAAAGCATTTTGTCATTAAGAAACCCTGTTCCTAAGGATGTCCAATTTCAGTGGGCTCTGACTGAAGCCTCTAAAGATTCTAGTGTAGGAGAGTTTTTTAAAAAGTTAGTTCACAGTGAAAAGGCCAGAATCAAATCATTATGGGGATTCAATGATGACATGGATATAACTTCTGTTATGGAAGAACCTCCTCTCTTGCCATCCACAAACGATGATTACTATGATAAGGAAAATGCCATTAAGTGTAAGCTATGCTCTGCAGAATTTCCTGATGACCAAGAGCTTGGTAACCATTGGATGGACAGTCATAAAAAGGAGGCACAGTGGCTATTTAGAGGCTATGCATGTGCCATTTGTCTGGATTCATTTACTAACAAGAAACTGTTGGAAACGCATGTTCAGGAGAGGCACCATGTGCAATTTGTTGAACAATGCATGCTTCTCCAATGCATCCCTTGTGGGAGTCATTTTGGAAATACCGAACAATTATGGCAGCATGTTTTATCAGTTCATCCTGTTGATTTTAAACCATCAAAAGCTCCTGAGCAGCAAACTTTATCTACTGGTGAAGATTCTCCAGTAAATCGTGATCAGGGTAATTCAGCCCCTTTGGAGAATAATTCTGAGAATACAGGTGGTTTTCGGAAATTTGTTTGCAGGTTTTGCGGGTTGAAATTTGATTTACTACCTGACCTAGGTCGACATCACCAAGCTGCTCATATGGGGCCTAATCTGGCCAGCAGTCGCCCTGCAAAGAGGGGAGTTCGATATTATGCTTACAGATTAAAATCTGGCAGACTTAGCCGCCCAAGATTTAAAAAAAGTTTGGCAGCAGCATCATACAGGCTTAGAAATAAGGCTAATGCTAATTTAAAGCGAAGCATTCAGGAAACAAATTCACATGGCACAGGGGGAATAACCGGGCAACCTCATGTTGCTGAAACAACAAACATTGGTAGATTGGCAGAACATCAATGCTCAGCTGTTTCAAAGATTTTGTTTTCAGAGATTCAGAAGACGAAACCTCGTCCAAACCATCTTGATATTTTATCAATCGCTCGCTCTGCTTGCTGCAAAGTTAGTCTTGTAGCATCATTGGAGGAGAAATATGGAATTCTTCCTGAAAAGCTCTATTTGAAGGCAGCAAAACTTTGCAGTGAGCATAATATTTTGGTAAGTTGGCATCGGGAGGGTTTTATTTGTCCTAGTGGTTGTAATGTATCAAAGGGTCAAGTTTTGCTCTCTCCTTTAGAGTCTCTTCCTAATAGTTCTGTAATGCCCAAATCTGGGAATTCAACTGATCCTACAAGTGACGAGTGGGAGGTGGATGAATTTCACTGCATCATCAATTCACGAACTTTAAAGTTAGGTTCACTGCAAAAAGCTGTAGTCTTGTGTGATGACATTAGCTTTGGGAAGGAATCAATTCCAGTGATTTGTGTGGTAGATCAAGAACTTGTGCATTCTCTTCATATCAATGGCTGTAATGGACAAAATATAAACCCTTCTCGGCCTTGGGAGAGCTTTACCTATGTTACAAAGCCAATGCTCGATCAATCCCTCATTCTTGATTCAGAGAGTCTGCAACTGGGATGTGCCTGTCCATACACCACCTGCAGTCCTGAAACATGTGATCATGTTTACCTTTTCGGCAATGACTATGATGATGCAAAAGACATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATGAGAATGGTCGAATAATCCTGGAGGGATGGGCAGTAAGGGCTGGTGAAGCTATTCTACGTGGCACATTTGTGTGTGAATACATTGGAGAAGTTTTAGATATGAAAGAGGCACATGATAGGCGTAGAAGCTATGGCACAGAGCATTGCAGTTATTTCTACGACATTGATGCTCGTGTTAATGATATGAGCAGATTGATTGAAGGACAGGCTCAGTATGTAATTGATGCTACTAAATTTGGAAATGTTTCAAGATTCATCAATCATAGAGACCGTATCGTAGATATTGAAGGTCACATGACATCTCTAATAAAACGTTACCCTGCTTTTCTGATGAAAAGAAAAGGCCGGCTTATTGACAAATATGTTACAAGAAATGTGCTTTCTATTGCTTTAGGTGAAGAGCTAACATATGACTATCAGTACGAGCATGTGCTTAGTGAAGGATCTCCTTGCCTTTGCGAATCCTTGAAGTGTAGGGGGCGCCTTTATTAG
Protein Sequence:
- >Vradi11g05250.1|Vigna_radiata|C2H2|Vradi11g05250.1
MEVLCSGVQYAGESDCAQQSSGTAFVYQEETNCAESGGQDKLVAGLLNESSHKMQGPQIERQGGLSTNSDCQCIGASCCDCQVDDQNEYCGFHDFEEDIMNEPCLTSDNSISVVDTIESESPNNSREGDLSCSEPKWLEGDGSVALWVKWRGKWQAGIRCARADWPLSTLKAKPTHERKKYFVIFFPHTRIYSWADMLLVRSINDFPHPIAYKTHQVGLKMVKDLTVARRFIMRKLVVGMLNMVDQFPFNALTETARDMKVWKEFAMEASRCNGYSDFGRMLLKLHSSILQHHINVDWFRHSYTSWTERCQSANSADSVELLKEELFDSILWNGINTLSDAPVQSTLSSEWKTWKHDVMKWFMTPPSLSISKDTQQQSYDDLFPANLQVCRKRAKLEVRRADTHASQVEIKAQTVALQADPGFFKNQGILSTLADESCKQEGVREVSMAADSPGHLVDKWNGIVVENTDPHFLHTTPTKEMTVAKSVESGSKNRQCIAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSTKTEKPVPLDTPMCEGTTVLGTRCKHRALPGSLFCKKHRPHAETEQISNIPQNTLKRKHEENYTGSEGILSRDLVLVNVESPLQMDPVSSIGGDSVYGENNSNEKPMHSEHYHNAMESLQCIGSPPYDKMNPCREGPKRYCLYCESHLPSWLKRARNGKSRIVSKEVFTELLRDCNSWEQKVHLHKACELFYRLLKSILSLRNPVPKDVQFQWALTEASKDSSVGEFFKKLVHSEKARIKSLWGFNDDMDITSVMEEPPLLPSTNDDYYDKENAIKCKLCSAEFPDDQELGNHWMDSHKKEAQWLFRGYACAICLDSFTNKKLLETHVQERHHVQFVEQCMLLQCIPCGSHFGNTEQLWQHVLSVHPVDFKPSKAPEQQTLSTGEDSPVNRDQGNSAPLENNSENTGGFRKFVCRFCGLKFDLLPDLGRHHQAAHMGPNLASSRPAKRGVRYYAYRLKSGRLSRPRFKKSLAAASYRLRNKANANLKRSIQETNSHGTGGITGQPHVAETTNIGRLAEHQCSAVSKILFSEIQKTKPRPNHLDILSIARSACCKVSLVASLEEKYGILPEKLYLKAAKLCSEHNILVSWHREGFICPSGCNVSKGQVLLSPLESLPNSSVMPKSGNSTDPTSDEWEVDEFHCIINSRTLKLGSLQKAVVLCDDISFGKESIPVICVVDQELVHSLHINGCNGQNINPSRPWESFTYVTKPMLDQSLILDSESLQLGCACPYTTCSPETCDHVYLFGNDYDDAKDIFGKPMRGRFPYDENGRIILEGWAVRAGEAILRGTFVCEYIGEVLDMKEAHDRRRSYGTEHCSYFYDIDARVNDMSRLIEGQAQYVIDATKFGNVSRFINHRDRIVDIEGHMTSLIKRYPAFLMKRKGRLIDKYVTRNVLSIALGEELTYDYQYEHVLSEGSPCLCESLKCRGRLY*