Information report for Vradi03g03410.1
Gene Details
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Functional Annotation
- Refseq: XP_014494930.1 — zinc finger protein JACKDAW isoform X1
- Swissprot: Q700D2 — IDD10_ARATH; Zinc finger protein JACKDAW
- TrEMBL: A0A1S3TMD7 — A0A1S3TMD7_VIGRR; zinc finger protein JACKDAW isoform X1
- STRING: XP_007162739.1 — (Phaseolus vulgaris)
- GO:0010075 — Biological Process — regulation of meristem growth
- GO:0045604 — Biological Process — regulation of epidermal cell differentiation
- GO:0048364 — Biological Process — root development
- GO:0051302 — Biological Process — regulation of cell division
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0042803 — Molecular Function — protein homodimerization activity
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_09819, C.cajan_37595
- Glycine max: Glyma.03G179700.2.p, Glyma.03G179700.1.p, Glyma.19G180400.1.p, Glyma.19G180400.2.p, Glyma.13G139000.2.p, Glyma.13G139000.1.p, Glyma.10G051500.4.p, Glyma.10G051500.3.p, Glyma.10G051500.2.p, Glyma.10G051500.1.p
- Juglans regia: WALNUT_00017188-RA, WALNUT_00017194-RA
- Lotus japonicus: Lj5g3v0626740.1, Lj0g3v0300749.1
- Manihot esculenta: Manes.08G005700.1.p, Manes.09G069600.1.p
- Ricinus communis: 30078.m002347
Sequences
CDS Sequence:
- >Vradi03g03410.1|Vigna_radiata|C2H2|Vradi03g03410.1
ATGATGGACGGTGCAGCGGGGACCCATGGTTCAGTTTTCTTGAGCCCTCACAATGACTACGCAGTGACAGAGTATCACGGACGTGAGCCCTTTTCACTTTCCAGTACTCTCCCAGGGCTTCCCAATGAACAAAACACAAACCCTAACCCTAATCATCCTCCTCCACCCACCAAGAAGAAGAGAAATCTACCAGGAACACCAGATCCAGATGCTGAGGTTATTGCTCTTTCACCGAAAACTCTCATGGCCACGAACCGTTTCATCTGTGAAATATGCAACAAAGGGTTCCAGAGGGACCAGAACCTTCAGCTTCATAGGAGGGGTCACAACCTTCCATGGAAGCTACGACAGAGGTCAAACAAAGAGGTTCGGAAGAAGGTATATATCTGTCCAGAGAAGACATGTGTCCACCACCATGCCTCCAGGGCTCTCGGAGACCTCACCGGAATAAAAAAGCATTATAGCAGAAAACACGGTGAGAAGAAGTGGAAGTGTGAGAAGTGCTCCAAAAAGTACGCAGTTCAATCTGATTGGAAAGCTCACACCAAAACCTGTGGCACCCGAGAGTATAAATGCGACTGTGGCACCCTCTTCTCCAGGAAGGACAGCTTTATTACTCACAGGGCTTTCTGTGATGCCTTAGCCGAAGAGAGCTCGAGACTTTCCTCAGTTACTACCAGTAGTCTAAATTTCAAGAGCGAAGATGCAAGTGTGATGAATACACAAGCTGGTTTGTCGTCATGTGAATTAATCACTGGTCAGGGAATGCAGAGTGTTCCACACTTTGGTCCACATGGGTTTCGTTTAATGGGAATGGGTGCAGACCAACAAAGACCAAACTTGTCACTGTGGTTGAATCAGGGACATCACATTAATAACCCACTTGATGTTCCATCATCAAGTTCCTCAGGTTTGCCTGAGGTTGTGCAAATGGCACAAGCTAATAATGCCTTGATTGATTCTTCTTCAGTATTCTCAAATTTTAGAATGCCTGCCTCCAATTCAAAGGGAGAAGGTGGAGCTTCAGATTTGGCAACAATTTATTCTGAAAGTCAAAACAAGAATTCAATCTCAGCTTCCCCAATGTCAGCCACTGCCCTTTTGCAGAAGGCAGCACAAATGGGTTCCACCAGAAGCACCAACCCTTCAATTTTCAGTGGCAGTTTTGGAGTGATGAGCTCATCTTCCACCCAAAGTACCAGTCTCAATAATAGAAATGCAAACCAAACCGGTGACCAACTTAACCAAGTCTTTCACAACATGAACCGACAGGAAAATTTCAATGGAACAAGCAGTAGTGCAACTATGTTGGGTAGTTCTTCGAACTTTAGCTCATTGACACATCCATCAAACAGTTTTGATCAGTTTCTGATGCAAAACAATGTGGAACCAACTCAGATAAACCTCCATCCAGGCTCAAACACAGTGGAACATAACTTGACAAGAGATTTTCTTGGCATGAACAGAAATGGAGGTGGACATCCATTTCTACCCGAAGAGCTTGCCAAGTTTGCTTCCTTAGGCTCATCAATGGGTCTGAACCAATTCATTGCAGGCCATCAATGA
Protein Sequence:
- >Vradi03g03410.1|Vigna_radiata|C2H2|Vradi03g03410.1
MMDGAAGTHGSVFLSPHNDYAVTEYHGREPFSLSSTLPGLPNEQNTNPNPNHPPPPTKKKRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVRKKVYICPEKTCVHHHASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESSRLSSVTTSSLNFKSEDASVMNTQAGLSSCELITGQGMQSVPHFGPHGFRLMGMGADQQRPNLSLWLNQGHHINNPLDVPSSSSSGLPEVVQMAQANNALIDSSSVFSNFRMPASNSKGEGGASDLATIYSESQNKNSISASPMSATALLQKAAQMGSTRSTNPSIFSGSFGVMSSSSTQSTSLNNRNANQTGDQLNQVFHNMNRQENFNGTSSSATMLGSSSNFSSLTHPSNSFDQFLMQNNVEPTQINLHPGSNTVEHNLTRDFLGMNRNGGGHPFLPEELAKFASLGSSMGLNQFIAGHQ*