Information report for Vang02g09500.1
Gene Details
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Functional Annotation
- Refseq: XP_017440578.1 — PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1
- Swissprot: Q9C8N5 — STOP1_ARATH; Protein SENSITIVE TO PROTON RHIZOTOXICITY 1
- TrEMBL: A0A0L9VL16 — A0A0L9VL16_PHAAN; Uncharacterized protein
- TrEMBL: A0A0S3TA62 — A0A0S3TA62_PHAAN; Uncharacterized protein
- STRING: XP_007151889.1 — (Phaseolus vulgaris)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Arachis hypogaea: Ahy019905, Ahy008019
- Cajanus cajan: C.cajan_43755, C.cajan_07227
- Cicer arietinum: XP_004496356.1
- Fragaria vesca: mrna27486.1-v1.0-hybrid
- Glycine max: Glyma.16G156400.1.p, Glyma.10G215200.1.p, Glyma.20G176500.1.p
- Juglans regia: WALNUT_00010075-RA
- Lotus japonicus: Lj2g3v0216910.1, Lj5g3v1853230.1
- Prunus mume: XP_008237278.1
- Prunus persica: Prupe.8G055100.2.p, Prupe.8G055100.1.p
Sequences
CDS Sequence:
- >Vang02g09500.1|Vigna_angularis|C2H2|Vang02g09500.1
ATGGCAACCAGTAAAGGTGTGGTGGTCGATCGGCCTGGTAGGTGGTCGACCACTCGGTCTGGTGGTCGGTCGGCGTGGTGGGTGGTTGCCCTGGTGGTCGGCCTCTCAACCTGGTGGTTGGCCACTCGGTATGCTGGTCAGCCACTCGATTTGGTGGTCGGCCTGGTTGTCAGTCAGCCTGGTAGTTCCAGGAGACTGTCGAGGTCAACAATTCTCCTAACTTCTTTCGTCTATTGTTCGATCGATTTAAGGTTATCAATAGAAGTGATCAAGAATCTAGATAAAGAACTTGAAATGGATACAAATGGGAGTCTACGTGCCAACAACTGGGCAAGGTCTTCATCGTTAACCTCGGATTCCATGTCATTCCCAAATTTTGGTCTGCAGAATAATCAACCGAAATGGGATGATCCTTCAAATTCTGATTATGGGATCAGAGCAGAAGTACCTTTCAAAGACTTCAACCAGCCTTCTCAAACTCAGTCTCCACTTCCTTGCAACTCAAACAACGAGATTGAGATCCCAAATCAAGAAAACTGTCATCTGAATGAATCATCACAAAACAGTGCACTCCAAGATTGGGACCCCAATGTGATGTTGAATAACCTGTCTTTCCTGGAAGAAAAGATTCATCAGCTCCAGGATCTAGTGCACTTGATTGTTCGTCAAAAAGGCATTGGACAACCTAATGAACTTGTAACACAGGAACAGCAGCTTATCACAACTGATCTCACATCAATCATTATTCAGTTGATCTCTACTGCAGGTAGTCTGCTCCCATCTGTTAGGCACAACCTTGCAAACACAGCTTCATTGTTTGGACAGATTGATCAGCTTCGTGAGACGACCATTCCTTCCGGGACTGGTGGAAGTAGCAGCTGTATTCAGCCAGAAAATAATGGTGGAAAGAAAATGTCTGATCAGTCCATGCAAACTGATCTACCTAATAACTGTGAAATGGAGCCAAACTACAATGTGGTAGAACAAGAACTCAAAGATGAAGAAGATGTAGATGATGGAGAAAACCTTGCCCCTGGTTCATATGAGATTCTACAATTAGAGAAAGAAGAAATCCTTGCTCCTCACACCCATTTCTGTACAATTTGTGGGAAGGGGTTCAAGAGAGATGCAAATCTGCGAATGCATATGCGTGGCCATGGCGACGAGTACAAAACCCCAGCAGCTCTTGCAAAACCTCACAAAGAATCTGGATCACCAAAGCTTATCAAGAGGTATTCCTGTCCCTATCCTGGCTGCAAGCGCAACAAGGATCACAAGAAGTTTCAACCTCTGAAGACTATCCTGTGTGTGAAAAACCATTACAAAAGGACACACTGTGACAAGAGCTACACATGCAGCAGATGCAACACCAAGAAATTCTCAGTCATGGCTGATCTGAAAACTCATGAAAAGCACTGTGGTAAGGATAAATGGTTGTGTTCATGTGGCACAACATTTTCTAGGAAAGACAAGCTTTTTGGGCACATTGCTCTTTTCCAGGGCCATACTCCAGCCATTCCCTTGGATGACGCCAAAGGGGTAGCTGAGCCACCCAATCATGACAGCAAAGAAAACAGTAAGGTGGGGAATGTGCAGTTCAGTTTTGGATCAAGTCCTTCTTCAAATGGAAATGAAGTTGAACATGTGATGGATGTAAAAGGCAATTGTGATGATCCTCTAAGTTTTTTCTCATCATTGAACTTTGACAACAGCTTTGGTGGGTTTAATGAATTCACTAGACCTCTGTTTGATGACTCAGAAGGCTCATTCTCTTTTGTGATTCCTGGATCTTTCAAATCCGACGGAGTATCCAGCCCTGACAATCTTTTGTAA
Protein Sequence:
- >Vang02g09500.1|Vigna_angularis|C2H2|Vang02g09500.1
MATSKGVVVDRPGRWSTTRSGGRSAWWVVALVVGLSTWWLATRYAGQPLDLVVGLVVSQPGSSRRLSRSTILLTSFVYCSIDLRLSIEVIKNLDKELEMDTNGSLRANNWARSSSLTSDSMSFPNFGLQNNQPKWDDPSNSDYGIRAEVPFKDFNQPSQTQSPLPCNSNNEIEIPNQENCHLNESSQNSALQDWDPNVMLNNLSFLEEKIHQLQDLVHLIVRQKGIGQPNELVTQEQQLITTDLTSIIIQLISTAGSLLPSVRHNLANTASLFGQIDQLRETTIPSGTGGSSSCIQPENNGGKKMSDQSMQTDLPNNCEMEPNYNVVEQELKDEEDVDDGENLAPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKESGSPKLIKRYSCPYPGCKRNKDHKKFQPLKTILCVKNHYKRTHCDKSYTCSRCNTKKFSVMADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLDDAKGVAEPPNHDSKENSKVGNVQFSFGSSPSSNGNEVEHVMDVKGNCDDPLSFFSSLNFDNSFGGFNEFTRPLFDDSEGSFSFVIPGSFKSDGVSSPDNLL*