Information report for Vang0021ss02520.1
Gene Details
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Functional Annotation
- Refseq: XP_007150139.1 — hypothetical protein PHAVU_005G130100g
- TrEMBL: A0A0L9UML2 — A0A0L9UML2_PHAAN; Uncharacterized protein
- TrEMBL: A0A0S3SGU7 — A0A0S3SGU7_PHAAN; Uncharacterized protein
- STRING: XP_007150139.1 — (Phaseolus vulgaris)
- GO:0010200 — Biological Process — response to chitin
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_25567
- Cicer arietinum: XP_004487557.1
- Glycine max: Glyma.12G179000.4.p, Glyma.12G179000.3.p, Glyma.12G179000.2.p, Glyma.12G179000.1.p
- Gossypium arboreum: Cotton_A_13920_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A05G0718
- Lotus japonicus: Lj3g3v1113580.1
- Manihot esculenta: Manes.11G152600.1.p, Manes.04G012700.1.p
- Populus trichocarpa: Potri.004G217100.1
- Prunus persica: Prupe.6G113300.1.p
- Sesamum indicum: XP_011089967.1
Sequences
CDS Sequence:
- >Vang0021ss02520.1|Vigna_angularis|C2H2|Vang0021ss02520.1
ATGTTGTCAGAAATATCAGACATGGAAGGCATGGCCATGGAGGAGCTTGTCTCATGCAACAACGATCCCACCAACATAGCCAAAGGGAAGCGAACAAAGCGACGCCTGAGGCCTTTGTCACCTTGTGTTGTCACCGCCGTTACTGCCACGGCCGCCGCCATGACATCAAGCTGTTCGAGTGCTTCTGGCGGCGGCGGTGGGTCGTTTTCGTCTATCACCTTGGAGGAGGAAGAGGAAGACATGGCAAACTGTTTGATTCTCCTGGCACAGGGAAGAGGAGGAAGCGATCCTCTTCATCACAAGGACTTATGTGATGATGTGAAGACGGAGAAGGGTGGCAGCAAAATTGAATTTTATGTTTACGAGTGCAAAACATGCAACAGAACATTCCCTTCTTTTCAAGCACTCGGTGGCCACAGAGCGAGTCACAAGAAGCCCAAGGTTGAGGAAAAGAAATCCCCACCACCGTCGTTGCCACCGCCACCGTCTTCGTCCTCGCAACTATTTAATTTTGAAGAAACGAAACCGAATCACATGAAGATTAGCCCTTCCGTTTCGCTTCAATTAGGGTGTGGAAACAATAGGGGTGGCTTAAATTTCCATGGGAACAAGTCCAAGATTCACGAGTGTTCCATTTCCTCGGAGTGTTCTACAATTGGATCTCAACCTGCCGGCGCCGGAGGACGATCTCCGGGACTCGAAGTTTCAGTTTTCGGGGAATCAGAATTCCATGATGCTGTCGGCTGCTCCGGCTTTGGTGGGATGCCATTATTAGAAGCCAGAGTGGGAATTGGACGGAGAGGGGGAGAAAATTCCGCCCATACAAAAGTTGATGCTCCCAAGAAAGATACTGGTGAGTCTGAGACCACAAAGAAACGTTTGATTAGGAGCTTCCAAAATCATCAAGGGCTTGAGATGTTCCCTGACCATGAAGATTTGGTGTCACCCTCTGTGGAATCTGGCTCAGTTTCACACTCCAGTACCCTCCTCTTCAATCTCTCTATTCTCAAGGACAAGGTGAGTGAGGTGCAGGCCCTAGTAGGTGTTATTCTCTCCCCAAATGAAACCCTGCCCGAGTCAACTTCCATGGCCATATCCAGCATGAACTCCACAATCCAAGAAATCCTAGTCACTGCCTCATCAATGATGTTCGCCTGCCAACAGATGGCTCTCACAACAACCCCTCCAGGTACCAATAATAACACCACTACATGCACCCACAAATTGCACCAGCCCAACAAGTTATTGCCTCACTCAAATTTTGGCACAAATAGAAGTCTGCTTGGTAACATAGCCATAGATATCAGTGACCATCATCAGGGTTGTTTATTTTCTAGCACTGAGTCAGAGGCACTGGACTGGTTTAGTGAAAGCTATAACAACAATAACGACGATAATAGCAATAGCAATATTAGTAAGACTAAGGAAGACGATCCAGGCGTTGTAATTGGTGAAAACAACATGATTATTACTAGAGGTGGAGCTCCAAGGGAAGAACGTGAACTTAACGAAGAAGGGTATAGTCATAGAGGGATTTCACCGAAGAATAGTGATGTAATTGAATTGGATGCTGCGGATTTGTTGGCTAAGTACACGCACTATTGCCAAGTTTGTGGCAAAGGGTTCAAGCGTGATGCGAATTTGAGGATGCACATGAGGGCTCATGGGGATGAGTACAAGACCAATGCTGCATTGAGCAACCCAATTAAGAATAAAGGGAAGTTGGAAGGGGAAAGCGAGCTTTTGATGAGTGTGAAGCCAAAGAGATATTCTTGTCCTCAAGAAGGGTGTAGGTGGAACCAAAAGCACGCCAAGTTCCAGCCATTGAAGTCGATGATTTGTGCTAAGAATCATTACAAGAGAAGCCATTGCCCCAAAATGTATGTGTGCAAGAGATGCAACCAGAAACAGTTCTCTGTGCTCTCTGATCTTAGGACACATGAGAAGCACTGCGGGGATCTCAAGTGGCAGTGCTCGTGTGGCACTTCCTTTTCTAGGAAAGACAAACTCATGGGCCATGTTTCTTTGTTCCTCGGACACCAACCAGCTATCAACAATGTTGGTCTCTCGTCATACTCTGGGAAATTGGAGCACCACACATTGCAAATGCAGATTGATGCTACCTCAAGATGA
Protein Sequence:
- >Vang0021ss02520.1|Vigna_angularis|C2H2|Vang0021ss02520.1
MLSEISDMEGMAMEELVSCNNDPTNIAKGKRTKRRLRPLSPCVVTAVTATAAAMTSSCSSASGGGGGSFSSITLEEEEEDMANCLILLAQGRGGSDPLHHKDLCDDVKTEKGGSKIEFYVYECKTCNRTFPSFQALGGHRASHKKPKVEEKKSPPPSLPPPPSSSSQLFNFEETKPNHMKISPSVSLQLGCGNNRGGLNFHGNKSKIHECSISSECSTIGSQPAGAGGRSPGLEVSVFGESEFHDAVGCSGFGGMPLLEARVGIGRRGGENSAHTKVDAPKKDTGESETTKKRLIRSFQNHQGLEMFPDHEDLVSPSVESGSVSHSSTLLFNLSILKDKVSEVQALVGVILSPNETLPESTSMAISSMNSTIQEILVTASSMMFACQQMALTTTPPGTNNNTTTCTHKLHQPNKLLPHSNFGTNRSLLGNIAIDISDHHQGCLFSSTESEALDWFSESYNNNNDDNSNSNISKTKEDDPGVVIGENNMIITRGGAPREERELNEEGYSHRGISPKNSDVIELDAADLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTNAALSNPIKNKGKLEGESELLMSVKPKRYSCPQEGCRWNQKHAKFQPLKSMICAKNHYKRSHCPKMYVCKRCNQKQFSVLSDLRTHEKHCGDLKWQCSCGTSFSRKDKLMGHVSLFLGHQPAINNVGLSSYSGKLEHHTLQMQIDATSR*