Information report for TRIUR3_01525-P1
Gene Details
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Functional Annotation
- Refseq: XP_020180408.1 — uncharacterized zinc finger protein At4g06634-like
- TrEMBL: T1LAK1 — T1LAK1_TRIUA; Uncharacterized protein
- STRING: TRIUR3_01525-P1 — (Triticum urartu)
- GO:0015991 — Biological Process — ATP hydrolysis coupled proton transport
- GO:0045892 — Biological Process — negative regulation of transcription, DNA-templated
- GO:0045893 — Biological Process — positive regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0016021 — Cellular Component — integral component of membrane
- GO:0033179 — Cellular Component — proton-transporting V-type ATPase, V0 domain
- GO:0015078 — Molecular Function — hydrogen ion transmembrane transporter activity
- GO:0043565 — Molecular Function — sequence-specific DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi2g39700.1.p
- Hordeum vulgare: MLOC_37432.2, MLOC_37432.1
- Panicum virgatum: Pavir.3KG096800.1.p
- Setaria italica: Seita.3G068200.1.p
- Setaria viridis: Sevir.3G069500.1.p
- Triticum aestivum: Traes_1BS_0DEFAACB9.1, Traes_1DS_0BBC3B5D3.1, Traes_1AS_21ACC7F67.1
- Zea mays: GRMZM2G175000_P01
Sequences
CDS Sequence:
- >TRIUR3_01525-P1|Triticum_urartu|C2H2|TRIUR3_01525-P1
ATGGGCGCGGCGTACGGGACGGCCAAGAGCGGGGTGGGGGTGGCGTCGATGGGGGTGATGCGGCCGGAGCTGGTGATGAAGTCCATCGTGCCCGTCGTCATGGCCGGGGTGCTCGGGATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGGATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGCTACGCGCACCTCTCCTCCGGCCTCGCCTGCGGCCTCGCGGGGCCCGCCGCCGGCATGGCCATCGGCATCGTCGGCGACGCCGGCGTCAGGGCCAACGCGCAGCAGCCCAAGCTGTTCGTCGGAATGATCCTCATCCTTATCTTTGCCGAAGCCCTTGCCCTGAGGCGGATGCCTGAGGGGAGAGAAGGTGATCCTATTGTGAAACATAGGGAAGAGGGGGTGGTTTTTCCACGAATCGATAAAGAAAAAACAGTATATACCACTAAAAGCAAAATTTATCTTATCCTCTGTAGTTTGTCGTTCAGTTTGAGCTGGTCGTGCGATTGCCTGCAATGTCTAATTGGCGATTGGCTTCTGCGTAACCTGTGTGCAGAGGACGTGTACAAGAATCTGAAGGAGAACGGCGGCGTGGGGCAGGAGCCGGAGGCGCAGCCGCGCAAGGTTGAGCCGGCCACGGAGATACTCTTCCTCTGCAGCTACGACAACTGCGGCAAGACCTTTGTTGACGTGGCTGCCTTGAGGAAGCATGCTCACGTGCACGGCGAGAGGCAGTACGTTTGCCAGGAGCCCGGCTGTGGGAAGAAATTTGTAGATAGCTCAAAGTTGAAGAGGCACCACCTTACTCACACAGGACAAAAGGATTTCGTTTGCCCACATCCAGGCTGTGAGGTTTACTTTCTACTACGCCACAATTTCCTGTTTGCATCTTTGCAAGCCTTCTCATTGGATTTTAACTTGCGTGCACACCTCAAAACACATGCTGTGGAAAATTATCATATATGTCCCTTCCCAGCATGTGGCAAAAGATTTACAAGCGACTTCAAATTAAAATGCCATATTAAGACACATGAAAAGACTGGATCTCCTATTGCAGTGCAGCATACACCACCAGCAGAAAAACCACAAAGCACCATAAAGCCTTCCATACAAGCAACCCCAAAGCCTTCTGCGCCCACACCACCAAGCTTTTCCAGTGAGCGCCCTTATGTCTGCCCCTACGAAGGCTGTGGGAAAGCCTACATCCACGGTTACAAACTCAACCTCCATCTCAAGACTCAGCACCCTGACCACAATCAAGAAAACAATGGTAGGTCCGCCACACCTGCAGCGGGGTATAACTATGCTGACGGTGGTGACATTGCGCCAAACCCGAAAAGGAGCAAGACAAGCCAAGTGCACAGGGCCCCTCCATCTAACGCCTACAATGTCAAGGTTTCCAGCAGGATGGGTGTTGATACCAGTGGTGCAAAGAACCAGTGGCCAGGCAAGGGTATGTATGACGATGACAGTGAAGAGACCGAGGAAGATCCTGGTGGTAACAATGTAGAAGATGGCTGGAGATACGGTAACCAGAACGCCGACGATGAGGAAACAGAAGAAGATGAAGACTAG
Protein Sequence:
- >TRIUR3_01525-P1|Triticum_urartu|C2H2|TRIUR3_01525-P1
MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGPAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALRRMPEGREGDPIVKHREEGVVFPRIDKEKTVYTTKSKIYLILCSLSFSLSWSCDCLQCLIGDWLLRNLCAEDVYKNLKENGGVGQEPEAQPRKVEPATEILFLCSYDNCGKTFVDVAALRKHAHVHGERQYVCQEPGCGKKFVDSSKLKRHHLTHTGQKDFVCPHPGCEVYFLLRHNFLFASLQAFSLDFNLRAHLKTHAVENYHICPFPACGKRFTSDFKLKCHIKTHEKTGSPIAVQHTPPAEKPQSTIKPSIQATPKPSAPTPPSFSSERPYVCPYEGCGKAYIHGYKLNLHLKTQHPDHNQENNGRSATPAAGYNYADGGDIAPNPKRSKTSQVHRAPPSNAYNVKVSSRMGVDTSGAKNQWPGKGMYDDDSEETEEDPGGNNVEDGWRYGNQNADDEETEEDED