Information report for Traes_5BS_23717182B.1
Gene Details
|
|
Functional Annotation
- Refseq: XP_020201011.1 — lysine-specific demethylase JMJ705-like
- TrEMBL: A0A3B6LIB4 — A0A3B6LIB4_WHEAT; Uncharacterized protein
- TrEMBL: A0A446TZW6 — A0A446TZW6_TRITD; Uncharacterized protein
- STRING: Traes_5BS_23717182B.1 — (Triticum aestivum)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Traes_5BS_23717182B.1|Triticum_aestivum|C2H2|Traes_5BS_23717182B.1
AGAATCAGGAGCGATAATAATCTAACCTCATGCGAACCCCCTTGGGTATCTCCAAAAGGACATCATGAAGATGTGGCCTTTCAAACTTTAAATCAGAAGACGACCGTCTTGTCCCCTGAAGTGCTACTTTCTGCGGGAGTTCCTTGCTGCAGATTGGTTCAGAACCCTGGAGAATTTGTTATCACCTTCCCTGGAGCTTATCATTGTGGTTTTAGCCATGGATTTAATTGTGGGGAAGCAACAAATATTGCCACTCCTCTCTGGTTGCAGGTGGCCAAAGAAGCTGCAATCCGGAGGGCTTCAACTAATTGTGGTCCAATGATTTCTCATTATCAGCTGCTTTACGAGCTTGCATTGTCATTAAGTCAAAGGGAACCTAAGGATTTCCATACTCTTCCAAGAAGCTCTCGATTAAGGGATAAGAAGAAGAAGGATGAAGGAGATACAATGGTGAAAGAAAAATTTGTTGGAAGTGTGATTGAAAATAACAATTTGCTTAGTATCCTTCTGGATAAGAGTTCTTGTATAATTGTTCCTGAGACTCCATTTCCTCCTACATCCTTTCCTACGATGATGGAACCTGAACTCACTGTTAAACAAAGTTTGACGGGTGGTCACTGTAGTATTAGTCAGCAAGCAGTGCACAATATGTCTGTTGATGTGGCACTAGACAAAAGTATAGTAGTAGAGAACATGAGTCACTCTCAGTCAGTTACTGAAGCATCTTTATCTGCATACAACAGAAGAAAGCTTTATGAAACAAAATATGGTGAACTTGGCACTGCTGCCTTCTGTTTATCACCATCCAAGTTGCAGAGTGGAGTAACTGATAAAGATAAGAGAGGTGGGCTCTTAGATCAGGGGCGGTTGCCGTGCGTTCAGTGTGGCGTATTAAGCTTTGCTTGTGTTGCCATCATTCAACCTAGAGAAGCGGCTGTCCAGTTTGTGTTGTCTAGAGAGGGCATCTCATCGAGTGCAAAACCGGGAGAAGTTAGTGAATCAGATGGTATCTCAAATTGGATAACCAAAAATATTGAGATGGTTCCTCAACAAGGACAAGCTTCAGAAGCACTTAGCGTAAGTTTAGCCCATGTATCTGATCGGTGTGGACAACTATACAGCAGGAACAATAATGGGTCAACCTCTGCTCTAGGGCTTCTAGCTTCTACTTACGGATCATCAGACTCTGAGGAGGAATCAAACCAAGGCAAAGATAATCAGTTATTGGAAACATCAGTTAGCTTCTCAAGTACAGTTCAGCGTCAAAGATCAAATTCGCACTTGTATGAAGAGTGTTGTGAAGCCAAAACCACAACTTCTTTGCTGAAATCTATAGAGGATAATAGTACGACAATAACTCGATGTGGTAGGGACACAGATATCAATCATTTAGCAAAGCTGAGAGAGCAAGGAACAACCTATGATCAGTGTTCTGTCTACATTGATTTGGCTAATGATCTAACCATATCAGGTGTAAAAGCCTATTCAGATACTCATGTAACCACAGCTAAGTCCTCAATTGAACCAGATGTGTTGACCCAGCTCAAGTACAACAATGATTCTTGCAGAATGCATGTATTTTGTCTAGAACATGCTTTGGGGACATGGACACAACTTCAAAAAATTGGTGGTGCTAATGTTATGCTCTTGTGTCATCCGGAATATCCTAGAGCAGAGTCAGCAGCAAAATTCATAGCAGAAGAACTTGGTTTGAAGCCTGATTGGAAAGATGTAGCTTTTGAAGAAGCAACTGATGATGACATCAGAAGAATTCAGTTGGCGTTGCATGATGAAGATGCTGAACCTGCAAGCAGTGACTGGGCAGTTAAAATGGGTATCAATATATACTACAGTGCAAAACAGAGCAAATCCCCGCTTTACAGCAAGCAGATACCATACAATTCCATCATTTATGAGGCATTTGGCCAAGAAAACCCAGACAATTTGACAGATTATGGACGGCAAAGATCAGGCGTGACAAAGAAAAGAGTGGCTGGATGTTGGTGCGGGAAAGTTTGGATGTCAAACCAAGTCCATCCCTTTTTAGTTCGTGAGCATGAAGAACACAATCATGCCATAGTTTGCAGCAAAGTGATGCTTGGTGCTAATTACCATGAGATAGTATACGATGAACCATCGCTTACATGTAATACAATGGTTAACTGTAGCCCATCAAAAAGGATATCCAGAAGGAAAGGAAGGGACTCTATTGAAAAATCTGGAGCCAGAAAGAAGAGATGCTCCGCCAATGACGAAGCCACTTTACATTGCAGTAGCCTTGGGATGAACTCTAAAACCATCAGCGATCAGCCTAGAAACTTCGATGATCATGACAAACATGAAGGAGGTAAAATTACAGAAGCACCAAGCACTCAGCAATATCAACAATATACCTTGCAAAGCATGAACATGAAGTCAAGTTCTAACAAGCCAAAGGATTATAAAGGAAACCGCAATTTTCTTGACCTTTATGATGAAGCTAATGACGTGGACTGCTGGTTTAACATAGATTCTGGAGATAGTACTGCAATACGACACTTGGAAGACAGTCGACAACAAGAATTTGGTACTGTGAAAGCTAAATCTCCAGGTAAATTGCAAGGTAATATGAGAAAATCGAGCAAGTGCAAGGCGAGCGATGATTCTCTGAATGGAGACAAGAAAGTGCAAAAGATGAATAAGAAATCAATTTCTAGGAAGCAAAAGGACGTCGAGATAAACACACAGTTTCGAGAAGAATACGATGAAGATAACAACTGGGAGGAAGTTCCAGAAGGAAAAGATCATGATGTGAAAGTGGAATCTAGAGCCAAAACACGAAGTGGTGAGGATGATAAAAGAAACAACAACTCCCATGAACTAAATGATGAATATAATGATATGGATTGCTGGCATGACATACATCGCGGAGATAACGCCACAATGGGAAACTTGGATAACAGTCCAGTACAAAGACTTGAGGCTGCGGAAGTGAAATCTGGTGGTAAATTGCATTGTTGTAAGAGAAAATCCAGCAAGGGCAAGGCAAAGGATAATTACTCAAATGGAGATGAGAAATTGCAAATGCTGAACATAGAATCAATCTCTAGGAAGCAAAAGAGTGATAGCCAGTTTGATGAAGGTTGCGGCAGAGATAACGCTTTGGACTCTTTGCTTAATGATGTGGATGAAGCCACACGAGAGAACTGTTATGAAGTTCGGGAAGAAGAAATGGATGGCATGGAAGTGAAGCCTAGAGGGAAGGTGCAAACTGGTAAGAGAAAAACCAGCAGATGTCAAGCGGGTGATAAAGCAGCAAAATTTCCTTGTGATATAGAAGGGTGTGACATGAGCTTCAGCTCACAGCAGGATTTGTTGTTGCACAAGCGTGATATTTGTCCTGTTAAAGGATGCAAGAAAAAGTTCTTCTGCCATAAATACCTGCTCCAGCACCGCAAAGTGCACATGGATGAAAGGCCACTCAATTGTGAATGGAAGGGCTGCAAGAAGACATTCAAGTGGCCATGGGCTAGGACAGAACACATGAGGGTCCATACGGGGGTGCGACCTTACGAATGCATGGTACCTGGCTGTGGTCAGACATTCAGATTTGTGTCGGATTTCAGCCGCCACAAGAGAAAGACTGGCCATTCCAGTGGTAAGAAAAATAAGGAGAGTACATAA
Protein Sequence:
- >Traes_5BS_23717182B.1|Triticum_aestivum|C2H2|Traes_5BS_23717182B.1
RIRSDNNLTSCEPPWVSPKGHHEDVAFQTLNQKTTVLSPEVLLSAGVPCCRLVQNPGEFVITFPGAYHCGFSHGFNCGEATNIATPLWLQVAKEAAIRRASTNCGPMISHYQLLYELALSLSQREPKDFHTLPRSSRLRDKKKKDEGDTMVKEKFVGSVIENNNLLSILLDKSSCIIVPETPFPPTSFPTMMEPELTVKQSLTGGHCSISQQAVHNMSVDVALDKSIVVENMSHSQSVTEASLSAYNRRKLYETKYGELGTAAFCLSPSKLQSGVTDKDKRGGLLDQGRLPCVQCGVLSFACVAIIQPREAAVQFVLSREGISSSAKPGEVSESDGISNWITKNIEMVPQQGQASEALSVSLAHVSDRCGQLYSRNNNGSTSALGLLASTYGSSDSEEESNQGKDNQLLETSVSFSSTVQRQRSNSHLYEECCEAKTTTSLLKSIEDNSTTITRCGRDTDINHLAKLREQGTTYDQCSVYIDLANDLTISGVKAYSDTHVTTAKSSIEPDVLTQLKYNNDSCRMHVFCLEHALGTWTQLQKIGGANVMLLCHPEYPRAESAAKFIAEELGLKPDWKDVAFEEATDDDIRRIQLALHDEDAEPASSDWAVKMGINIYYSAKQSKSPLYSKQIPYNSIIYEAFGQENPDNLTDYGRQRSGVTKKRVAGCWCGKVWMSNQVHPFLVREHEEHNHAIVCSKVMLGANYHEIVYDEPSLTCNTMVNCSPSKRISRRKGRDSIEKSGARKKRCSANDEATLHCSSLGMNSKTISDQPRNFDDHDKHEGGKITEAPSTQQYQQYTLQSMNMKSSSNKPKDYKGNRNFLDLYDEANDVDCWFNIDSGDSTAIRHLEDSRQQEFGTVKAKSPGKLQGNMRKSSKCKASDDSLNGDKKVQKMNKKSISRKQKDVEINTQFREEYDEDNNWEEVPEGKDHDVKVESRAKTRSGEDDKRNNNSHELNDEYNDMDCWHDIHRGDNATMGNLDNSPVQRLEAAEVKSGGKLHCCKRKSSKGKAKDNYSNGDEKLQMLNIESISRKQKSDSQFDEGCGRDNALDSLLNDVDEATRENCYEVREEEMDGMEVKPRGKVQTGKRKTSRCQAGDKAAKFPCDIEGCDMSFSSQQDLLLHKRDICPVKGCKKKFFCHKYLLQHRKVHMDERPLNCEWKGCKKTFKWPWARTEHMRVHTGVRPYECMVPGCGQTFRFVSDFSRHKRKTGHSSGKKNKEST