Information report for Traes_5BL_C3F3A871A.1
Gene Details
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Functional Annotation
- Refseq: XP_020176734.1 — uncharacterized protein LOC109762306
- TrEMBL: A0A3B6LLX4 — A0A3B6LLX4_WHEAT; Uncharacterized protein
- STRING: Traes_5BL_C3F3A871A.1 — (Triticum aestivum)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi3g38747.1.p, Bradi3g38747.3.p
Sequences
CDS Sequence:
- >Traes_5BL_C3F3A871A.1|Triticum_aestivum|C2H2|Traes_5BL_C3F3A871A.1
CGCCGCCGCTGCCGCCGTCCGCCATGGGCACGGAGGTGGTGCCCGTGGTGGACCTTGGCGCGCTGTCCCAGTCGGAGCTCGTGGCGCTCGCGGCCGCATCGCCCTACGCCGTCGACCCCCGCCGCGGGCGCCGCGACGCCGACCTCCTCCCGCCCCCTAAGATCGATCGCGCCGTCTTCAACGAGAGTGCCGGCTCCCGCAAGCAGACCTTCTCCCGCCACCAATCTCCCCCACAATCTCACCCCTAGCACCGCCTCCTCCTCCGCCGTCGCCGCCCCCACGGAGGAGGATTCCGAGAACCGCCTCATTGTGTTCCACCTCCAGCAGCTCTTTGCGCGCGACGACCCCTCCTATCTGCCACCACCACCGCCGATTCCACTCCAACAGCTACCCCCGATACCCATACCCGCACCCACGATACCGGTGCCCACACCCCCCGTGGCCTCCGTGCCGATCCAGCAGCTCCCGGACCCAGACCGGGATTTGACGAACCCCAAGGGGGTGGCTGTTGATTTGGCCAGACTCGCGGAGTTGGTGGATCCGTATGGGGAGGAGATACGAAATCGGACTGCAGGACTGGCTCTGGAATCCGAGCTGCTGGGTTTCATGAATGAGTTGGAGGGGCAGTGGGGGAGTCGGAGGCGGCGGAGGAAGTTTGTGGAAGCAGCCATATTCGGCGACCACCTGCCCCGTGGGTGGAAGCTAATCCTTGGGATTAAACGGAAGGAGCGTGCTGCCTGGATCAATTGCCGCCGATATGTTAGCCCCAGGGGACATCAATTTGCTACTTGTAGAGAAGTTTCTTCCTATTTCATGTCACTTCTTGGATATGTGGAGGCAAAGCCAACCACTGTTCAGAACAATGATATGGGAGTTCGTGACTTGAGTGCTGTGAATGTGGGAGTTCGTGACTTGAGTGCTGTGAATGTGGGAGTTCAGAACAACGATGTGGGAGTTCGTGACTTGAGTGCTGTGAATACTGCAGGTCTTCACCAGCAAAATGATTCAACTAGGGACATGCAAAGTGCAGTGTCAGCCACTTCTGTTACATTATCCATTCACAATGGTGATTCTCAGGGACAGAGACAAAAACCTTATAAAGATGAAGCTCCGATAGAAGCAGTCAGGAAAGAGTGCAAAAAATGCAATTTGACTTTTGAGGACCAGAGTGCCTATGTGCAGCATCAATTGTCTTTTCATCAAAGGAAAGCTAAAAGGCGCAAGGTTGATAAATCGATTGGTCTGGGAGTCAGTAAAGATGGAAAACTTGAGACTCAAGAAAGTCAGAGGACCTCTGAAGATAAACCTGGCTATTTTGGTCATGGTGTAGCTGATGTTAAAAGTCAAGGTCAGAGTCCAGCAGAACTGTTTGGCGGAGCTTCTTCAGGAGATGTAGGTGCTCAGCTATCCTTGGCTGCAGCACCATGTGGGTTGCAAGAGATAACTGCCTTACCTGAACAGGTAGAAGAGCCATCTGCTGGAGAGCCTGTCTCTGGGCATCAGGACCTTCCTCAGGAGACTACTGGTTTACCTCAACAGGAAAAAGAACTTTCTGCTACAGAGCCTTTCGCTGGGCATCAAAAGGAACATGTTGATAATTCTGGTGACCATGAAATCCATGATGGAGCATGTCATATAGCTGAAGAGCCTCTTGCCTTTGATGTTGGAAGCAACCTTAGTACTTGCAAGTCTCCTGAACCAGAAGTTCATGAGCATGACAGCTCAAAAGATTTGGAATTTTCCATCGCAGATTGCTCAGGAAGTTTTGACAGGTCTCATGAAATCTCTAAGATACCTCAGGATGTTCCATGTACTGCAGATGCTCCAGGTGAAAAAAGTTGCTCTGATGATCCAATGGACTGTGCTGATATAACACTGCCAAAACAAGTTCCTGAGCACTGTGATATGCTGGATCACAAATTTAGAGGTTTTCCTGGAGGAACTGGTTTTAATGACCAGGTGGGAAATAATCCACTGTCTGCCAACTTGGATGAGCCTGATCTTAGTTCCAACAGCATGGAGGTAGATAACAGCAAGATAGCTTGCAAGTTTGGCGATATGCTGAATTCTACCAGCTCTGAATATGATAAACCTGTTGTGGATCAAATTGATCGTGGAGTGACTGCCTTGAAAAATGATGCGATCAACATTGATGATGGGATGAACATTGATGTCAGAATAAAGGAGGTTAACCTCAATTCATGCTTAGATACAATATCTTCTCCTGTTTCTGGTGCAAACTGTGAAACGTCTAATGCCCTTCATGATGGCAATCGATCGTCCATTCTCGCCCAATGTTTTGGTGGTAGCTCTAATGATGACAATGTTTGTCAGGACGAAAGTTTTGTCAATCAGAACAATGTTTCTAAGGCTGAAATTTTTGTCAATCAGAGCAATGACATGGTGTATCAATCCAATTTGAACATGAATCCTATCTCTCCTCCTCAAATTAGTGTGGATTATTTCACTAACTGCTCAATGAATTCTGAAATTAAGAACAACGACAACCGACGTGATGATAATGCCAAGGAACAGTTTGTGAACTCACGGAACATATCAAGTAATGAACCAGGTTTTGATGCTGAAGCTTACAACAATGACATCTTCACTGGTGCTATGGCAGAAACTAGCTTTGCTCAGCTGAATAATGCTATGAATATGAAGACTGATTACTCAAGCTGCTACTCAATATCTGATCTAAATACGCTGACTGGTGGTACTGCAACTGATGGAATTGATTTCCATGGTATGAGGAGTTCTTTTGTAAGTGGCTCCACCAGTCGCAGTGAACCAAATGAACTTGATTTTGATATCAAGGGTTCCATGCTCGAGGCTCTGGAAAGATCGGACAGCGACCTGGAAACACAGTACAATGGTGGCGATCCTGCCATTGACTCACTCCCTGCGGCAGGCACAAGTGGGACAAGTGTTGATGATTTTATGTCCATGCACACCAATTTTGGTAGCTTGACCTCTTTGGTTCGTTCCGTTGAAGGTGGTCCAATGAGCAGACTTATTCAAGATCAGTGTGATTTGCAACTTGGATTTGGTGCACAGAAGCAGCAAATATATCCTAGTTTTGAGGAGCACCTTCGGATGGCCTCAGCTGGAGCTCCGCAGTTTGGGAACATGGGCAGACACAATCCCATGCCTGTGCCTGTGCCCGTGCCCGAGCCAACACTGATGCTAGGGTATGAGCCAACGTTGATGCTGGGTTATGCACCGCAGTTCGGGAGCTGCCCTCCGGTCCAGTTAGGTTGGGACCTGTCCAAGATGGTTGGCGTGCTCCAGTCTGTATGTGTGTGGTGCAACACAAGGTTCCAGCATTTTGGCACGGCCGAGCAGCAGAACGACTCTGTTGGCTTCATTTGCCCCGCATGCAAGGACAAGACATCTGGTCATCTTGGTACACTCAACAATGGTTCATTGCTTTAG
Protein Sequence:
- >Traes_5BL_C3F3A871A.1|Triticum_aestivum|C2H2|Traes_5BL_C3F3A871A.1
RRRCRRPPWARRWCPWWTLARCPSRSSWRSRPHRPTPSTPAAGAATPTSSRPLRSIAPSSTRVPAPASRPSPATNLPHNLTPSTASSSAVAAPTEEDSENRLIVFHLQQLFARDDPSYLPPPPPIPLQQLPPIPIPAPTIPVPTPPVASVPIQQLPDPDRDLTNPKGVAVDLARLAELVDPYGEEIRNRTAGLALESELLGFMNELEGQWGSRRRRRKFVEAAIFGDHLPRGWKLILGIKRKERAAWINCRRYVSPRGHQFATCREVSSYFMSLLGYVEAKPTTVQNNDMGVRDLSAVNVGVRDLSAVNVGVQNNDVGVRDLSAVNTAGLHQQNDSTRDMQSAVSATSVTLSIHNGDSQGQRQKPYKDEAPIEAVRKECKKCNLTFEDQSAYVQHQLSFHQRKAKRRKVDKSIGLGVSKDGKLETQESQRTSEDKPGYFGHGVADVKSQGQSPAELFGGASSGDVGAQLSLAAAPCGLQEITALPEQVEEPSAGEPVSGHQDLPQETTGLPQQEKELSATEPFAGHQKEHVDNSGDHEIHDGACHIAEEPLAFDVGSNLSTCKSPEPEVHEHDSSKDLEFSIADCSGSFDRSHEISKIPQDVPCTADAPGEKSCSDDPMDCADITLPKQVPEHCDMLDHKFRGFPGGTGFNDQVGNNPLSANLDEPDLSSNSMEVDNSKIACKFGDMLNSTSSEYDKPVVDQIDRGVTALKNDAINIDDGMNIDVRIKEVNLNSCLDTISSPVSGANCETSNALHDGNRSSILAQCFGGSSNDDNVCQDESFVNQNNVSKAEIFVNQSNDMVYQSNLNMNPISPPQISVDYFTNCSMNSEIKNNDNRRDDNAKEQFVNSRNISSNEPGFDAEAYNNDIFTGAMAETSFAQLNNAMNMKTDYSSCYSISDLNTLTGGTATDGIDFHGMRSSFVSGSTSRSEPNELDFDIKGSMLEALERSDSDLETQYNGGDPAIDSLPAAGTSGTSVDDFMSMHTNFGSLTSLVRSVEGGPMSRLIQDQCDLQLGFGAQKQQIYPSFEEHLRMASAGAPQFGNMGRHNPMPVPVPVPEPTLMLGYEPTLMLGYAPQFGSCPPVQLGWDLSKMVGVLQSVCVWCNTRFQHFGTAEQQNDSVGFICPACKDKTSGHLGTLNNGSLL