Information report for TRAES3BF153400050CFD_t1
Gene Details
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Functional Annotation
- TrEMBL: A0A080YUM8 — A0A080YUM8_WHEAT; Uncharacterized protein
- STRING: Traes_3B_A7F590466.2 — (Triticum aestivum)
- GO:0006950 — Biological Process — response to stress
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0005516 — Molecular Function — calmodulin binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi4g31770.2.p
- Hordeum vulgare: MLOC_54725.5, MLOC_54725.1, MLOC_54725.2, HvDOF19, MLOC_57613.2, MLOC_57613.3
- Panicum virgatum: Pavir.8NG113600.4.p, Pavir.8NG113600.3.p, Pavir.8NG113600.2.p, Pavir.8NG113600.1.p, Pavir.8KG266900.1.p, Pavir.8NG107600.2.p, Pavir.8NG107600.1.p, Pavir.5KG370500.3.p, Pavir.5KG370500.5.p, Pavir.5KG370500.2.p, Pavir.5KG370500.4.p, Pavir.5KG370500.1.p
- Setaria italica: Seita.8G229200
- Setaria viridis: Sevir.8G238900.1.p, Sevir.8G238900.2.p
Sequences
CDS Sequence:
- >TRAES3BF153400050CFD_t1|Triticum_aestivum|C2H2|TRAES3BF153400050CFD_t1
ATGGGTGTGTGTGGCGTCCTGTCGGACATTGCCACCGTCGCGCAGCTGTCCGGGCTGCACGCTGTTATGCTCATCGCCCTGGCCGCGCACCTCCTGAGGATTCCGAAGTGCGAGACGGAATGCGCCAAGCTCGAGGGCTGCGCGCGCAAGCTCCACGTGCTGCTGGACATGGCAACACAGCATTTGGCGGTGGCTGAACTGGTCGCCGGGGCGCTGGCCGAAGCGGCCGACGTGGTGGACTCGTACCGCGGGAGCAGGCTCTGGCGACGCGTCCGGACTGGCAGGAGCATGGAGGCGCGGCTCCGGGACATGCGCAGTCGCCTCGACTGCTTGTGCACACTCGTGCTCTGCGTGCACGCCAATCTCCTCACGGCGTCGGCGTCGGATACTTGTGGAACAATCATCCATTACACGGCGCTCAAGCTGCTGATACTTCGGATACTTCTGGCACCACGTGAGATTTTCGATCCATCCATGCATATCGTGGTCGATGAGAAGTACCCTGATTGTCTATGTTTACTTGCTGATGACTGGTGCAGGAACCATCATCCATTACACGGCGCAGAGGTTTCTGATAGTACTTCCAACAGTGGAAGCGGGACCGCCGTGCTGCTCTGGGCCGTCGCGGACGAGGCCGCCATGCTGCAGCGGGACGCAGCGCGCGAGGCCGCCATGTTGTTCCTGGCCGCCGCAGACGAGGCCGCTGTGCTGCACCAGGATGCCGCGAACGAGGCTGTCGTGTTTCTCCGGGCCGCCGTGGACGAGGCTGTCGTGCTGCACCAGGCCGCTGCGCAGGCAAGCCCTAAACAGCAACAGTCAACAATCTTCTCAGCAAATTCCAACGCCAATCTTGTGGTAGCCAAGCAGCACCCACTCAATGCAACATGGGGAATTCCATTCCTGGATGGGAAGCATTTCTTGAAGATGTGTAATCAAGTACTACTTCAATGGGATGAGCCTCATGTGGAGGTGAAGAAACGTTGGAACTTTCATGATCAGCTCATGCCGCTGTATAGCACACACTCAGGGTATTATAGAGAAGATTTCCCCAGTACGAGCCTCATGGATAAAACCCATAAGTTACTGGCCAGTATTTCATCAGACGATTCTGTTTGGAAGATAATTACCAGTGTTACGAGTCGAGCCGCACAAACTCCTCAGAGGAGAGGTGTTCTCATTCGGCCCATTGAGCCATATGATTCAGATGATGGGCCACCAATTAAGAAGCAAAGGACCCAATATCAATTGCGATTTGTCAATACGGTGTCCAATGACTACTTCACACGGGAGAAAATCAAATCAGAGGATGGAAATCTCTTAAAGGTAGCTTTGTATGATGAGAACAATCTGGTAGTCACATCAGGTCCACTATCTTCAGCTTCTGTGGAGATCGTACTACTTCATGGTGATTTCAATGCTGAAGGTCAAGATTATTGGACATCAGAGGAATTCAGTGCCTGCCTAGTGCATCCACAATCTGTAAAAGAACCACCAGCCTTGGGAGGTGATTGTGGCTTGGCACTGACGGATGGAGAGGCAAACCTTGGTAGTATCAAGTTCCAGATTTCCTCCTCCCATGCCAGAACTGGAAAGTTCATAATGGGTGTTGAGATTAAAAATTTAAGAGAAGAAAGTGTTCAAGAAGGAATCACTAGCCCATTTCTTGTGAAAGTTGGCCTAGGGGAAGCAATTGGAACTGGAGAGGAGATGGCGGAGACGCCATTTGGGTCGTCGTTGCAGATCACCACCACCTCCGCCGCGACAAAGAGGAAGCGGCGGCTGGCCGTGACACCAGACCTGAACGCGGACGTGGTGTTGCTGTCGCCGCAGACGCTGCTGGACTGGTACCTGTGCGAGATCTGCAACCAGGGGTTCCAGCGCGAACAGAACCTGCAGATGCACCGGCAGCGGCACAAGGTGCCGTTGAAGCTGCTGAAGCGGGAGGCCGGCGAGCCGGCGCGGAAGCGTGTGTTCGTGTGCCCGTAG
Protein Sequence:
- >TRAES3BF153400050CFD_t1|Triticum_aestivum|C2H2|TRAES3BF153400050CFD_t1
MGVCGVLSDIATVAQLSGLHAVMLIALAAHLLRIPKCETECAKLEGCARKLHVLLDMATQHLAVAELVAGALAEAADVVDSYRGSRLWRRVRTGRSMEARLRDMRSRLDCLCTLVLCVHANLLTASASDTCGTIIHYTALKLLILRILLAPREIFDPSMHIVVDEKYPDCLCLLADDWCRNHHPLHGAEVSDSTSNSGSGTAVLLWAVADEAAMLQRDAAREAAMLFLAAADEAAVLHQDAANEAVVFLRAAVDEAVVLHQAAAQASPKQQQSTIFSANSNANLVVAKQHPLNATWGIPFLDGKHFLKMCNQVLLQWDEPHVEVKKRWNFHDQLMPLYSTHSGYYREDFPSTSLMDKTHKLLASISSDDSVWKIITSVTSRAAQTPQRRGVLIRPIEPYDSDDGPPIKKQRTQYQLRFVNTVSNDYFTREKIKSEDGNLLKVALYDENNLVVTSGPLSSASVEIVLLHGDFNAEGQDYWTSEEFSACLVHPQSVKEPPALGGDCGLALTDGEANLGSIKFQISSSHARTGKFIMGVEIKNLREESVQEGITSPFLVKVGLGEAIGTGEEMAETPFGSSLQITTTSAATKRKRRLAVTPDLNADVVLLSPQTLLDWYLCEICNQGFQREQNLQMHRQRHKVPLKLLKREAGEPARKRVFVCP