Information report for Tp57577_TGAC_v2_mRNA27920
Gene Details
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Functional Annotation
- Refseq: XP_003592255.1 — uncharacterized protein LOC11419752
- TrEMBL: A0A2Z6N8X4 — A0A2Z6N8X4_TRISU; Uncharacterized protein
- STRING: AES62506 — (Medicago truncatula)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_07269, C.cajan_11305
- Cicer arietinum: XP_004496548.1, XP_004496547.1
- Glycine max: Glyma.10G233400.2.p, Glyma.10G233400.1.p, Glyma.20G161000.1.p, Glyma.10G233400.3.p, Glyma.16G181700.3.p, Glyma.16G181700.2.p, Glyma.16G181700.1.p
- Manihot esculenta: Manes.06G149800.1.p, Manes.14G024700.1.p
- Prunus mume: XP_008234210.1
- Prunus persica: Prupe.2G297500.1.p
- Ziziphus jujuba: XP_015888867.1, XP_015888864.1, XP_015888857.1, XP_015888868.1
Sequences
CDS Sequence:
- >Tp57577_TGAC_v2_mRNA27920|Trifolium_pratense|C2H2|Tp57577_TGAC_v2_mRNA27920
ATGCCAGTTGCGAAACTTACTGCTTCAGGTACTCCCAATTTTATGAAAACAGAAGACGGAAATGATTCTTTGGATACATTAATCAGACAAGCAGTTGGAAAAGAACCTTTCCTTTCGTTTCCTAGGGCTGCTGACCGGCCAGCTCAGTGGATTCAATTATTTCATGCTTTAGAACAGCAACAAGAAATTCCAGGGTGGCCTTTGTTCTCTCCTGCAAAGGTTCAGTTATATAAGTGCGACAAGTGTACCAGAGAGTTTTGCTCACCCATTAATTATAGAAGACATAAACGTGTATACCATCGGTTGAAAAAGCTTGATAAGGACTCTAAGAAAAATAGGGATCTTTTAGGGGCATATTGGGATAAGCTCTCTATAGAAGAGGCAAAGGAAGCTGTGTCATTTGAGAATGTGACACTAGAGGAGGTTCCAGGGTCTTCAATTTTACAAGCTCTCTCAACTCTTAGAACACAACAAGGATTCTATTCTCTTCCACATAATTATCTCAGAGCTGGCTTTTCTCTTTTGGATATTGTTCAATCCAGGTCGTCTAGTTTCCCCATATCTTCCCAGAAGTTGTTCGATATTCTTGATGATTCCAGTGAAAAAACATTTTTATGTGGAACAGCAGTGTCAATGCAAAGACATGTTTTTGATGGAGAGGCTGGAAAGATTGGTCTTGAACCAAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTAGAGCAGAAATTGGTGAATGCGTGGCTCGCAGACAAAGATGCCGAAGCATTGAGATGCCAGAAGCTGCTGATGGAGGAGGAGGAAGCTGCTCAGAAAAGAAAAGCTGAAATTTTGGAGAGAAAACGCCAGAAAAAGCTTAGGCAGAAGGCGAGGAGCCGACTTGAAAATGACACAGAAATTAAAGGGAGCATCAGCAGCACAGGAGAGGATGTATCACCAGAGGAAGGATCTTTGGCTGCATGTGACTTTGAAGCACATAGAGAAGATGTATTTGCAGATCATGCTTCTTCACCACATGTAACTTATCACTTTCTAGACACCAATGAATGTGTCGATGGGGATACACAGTCAGGATACGACTGTGACACTGATCAGAACATGGAGCCACAAACATCAGAAAGGGATGCACAGTCAGGTTATGATTGTGACACTGATCGGAATTTAGAAAGACAGACATCACACAGACATAACCCTCGGCGCACAATGGCTGCTAGATGGCAAGGGCTTCCTAAGTCACAACGAACTATTGCCAATGGTTTGTATGCAAGCCAGAACTCTCAAAAGTCAAAGTTTGGAGTCATTCCAAAATATGGAAATGGAACAAATCGTGATCAAAGGGCAGCTCCTACAGTTAATGGTGGTAAAGTTTGGAGCCGAAAACCTAAACCAGAAACAGATGCAGTGGTTTTAAAAACCAGACTGCACAAAGAACCAGCCAAAATTAAGAATAATGAGGTTTTGATAGGATCTGTATCAGTTACACTGGCCAATTGCAGCCGATCAGAGTGTCATCTTGTCACATCTCAAGAGGACAGTTTAGTAGAGAATTTGGCCGACCAAAATGTTGCTCAGGAGAAGCCAATTAAAACCGACTCCTTTCACGGAGGCAACAATCGGTCAAGAGTTAAGCTTTGGAGACCAGTTAGCCAGCACGGAACTAAAAATCCAATGCCACTTGAAAGTGTTGGGACAGAAGTTGATGTAGTCTATGGAAAAGATGATCAAAATTTGTCAGTTCAAAGTAGTTTAAGGTTGTGTAATATAGATGGAGGTGATATTGGTTCTGGGAATAAATCCCATATCCATGCTGCAAAAGCCTTTCTTGCACAAAGATGGAAGGAAGCAATTTCATCAAATCATGTGGAGTTGGTAATTTCACCTGACCCTGAACCTCCCGGGTTCCAGCCAGTCCAGGATTGCGAGATAGCATCACGTCGATCTTCTAATACGGAGAGATATAGCATTCTTGCAAATACAGAGAACTTGTTGCCTGCAACTACCGGAGTTGCTAAATCCAAACCCAGAGTAAAGCCTGATAAGGGAATCAAGATAAAGTACATTCCAAAACTAAAAGCTGCAGCATAA
Protein Sequence:
- >Tp57577_TGAC_v2_mRNA27920|Trifolium_pratense|C2H2|Tp57577_TGAC_v2_mRNA27920
MPVAKLTASGTPNFMKTEDGNDSLDTLIRQAVGKEPFLSFPRAADRPAQWIQLFHALEQQQEIPGWPLFSPAKVQLYKCDKCTREFCSPINYRRHKRVYHRLKKLDKDSKKNRDLLGAYWDKLSIEEAKEAVSFENVTLEEVPGSSILQALSTLRTQQGFYSLPHNYLRAGFSLLDIVQSRSSSFPISSQKLFDILDDSSEKTFLCGTAVSMQRHVFDGEAGKIGLEPKNLVACTSFLLEQKLVNAWLADKDAEALRCQKLLMEEEEAAQKRKAEILERKRQKKLRQKARSRLENDTEIKGSISSTGEDVSPEEGSLAACDFEAHREDVFADHASSPHVTYHFLDTNECVDGDTQSGYDCDTDQNMEPQTSERDAQSGYDCDTDRNLERQTSHRHNPRRTMAARWQGLPKSQRTIANGLYASQNSQKSKFGVIPKYGNGTNRDQRAAPTVNGGKVWSRKPKPETDAVVLKTRLHKEPAKIKNNEVLIGSVSVTLANCSRSECHLVTSQEDSLVENLADQNVAQEKPIKTDSFHGGNNRSRVKLWRPVSQHGTKNPMPLESVGTEVDVVYGKDDQNLSVQSSLRLCNIDGGDIGSGNKSHIHAAKAFLAQRWKEAISSNHVELVISPDPEPPGFQPVQDCEIASRRSSNTERYSILANTENLLPATTGVAKSKPRVKPDKGIKIKYIPKLKAAA*