Information report for Tp57577_TGAC_v2_mRNA12188
Gene Details
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Functional Annotation
- Refseq: XP_013446614.1 — uncharacterized protein LOC25501782 isoform X1
- TrEMBL: A0A2K3NXR9 — A0A2K3NXR9_TRIPR; Serine-rich adhesin for platelets-like protein
- GO:0006526 — Biological Process — arginine biosynthetic process
- GO:0007165 — Biological Process — signal transduction
- GO:0009570 — Cellular Component — chloroplast stroma
- GO:0004358 — Molecular Function — glutamate N-acetyltransferase activity
- GO:0005515 — Molecular Function — protein binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Glycine max: GLYMA_01G119800, GLYMA_01G033200, GLYMA_01G032900
- Lotus japonicus: Lj4g0020262, LjContig00081g0000067, Lj4g0013302, Lj4g0019720
- Medicago truncatula: Medtr8g081010.1, Medtr3g464030, Medtr8g090280
- Prunus persica: Prupe.1G170500.2.p, Prupe.1G170500.1.p
Sequences
CDS Sequence:
- >Tp57577_TGAC_v2_mRNA12188|Trifolium_pratense|C2H2|Tp57577_TGAC_v2_mRNA12188
ATGTACTCGTGTAGTATGATTCCTCAGCAGCACCTTTCTCTCCATTTTCACTTCTCAACTACTTCCCCAAACTCAAAGACTTTTGCTGCTTCTCGCAACAATTTCAAGATTCGCTCTGTATCCACTACGAATAATCAGGCTTCAACTTACATTCCTGCTGCTCCCATTTTCCTCCCCGAAGGACCTTGGAAGCAGATTCCAGGTGGAGTTACTGCTGCAGAGGGTTTCAAAGCTGCGGGAATATATGGAGGGTTGCGCGCTGTAGGTGAAAAGCCTGACCTCGCACTTGTTACATGTGATGTTGATGCCATATCTGCTGGTTCATTCACAACTAATGTGGTTGCTGCTGCTCCTGTCATATACTGCAAAACTACACTAGACATTTCAAACACCGCACGTGCTGTATTAATTAATGCAGGTCAAGCAAATGCAGCTACGGGTGAAGCAGGTTACCATGATATGATAGAATGTGTGGAAACCCTTGCAAAGTTACTGGGAGTGAAGGCAGAAGAAATATTAGTTGAATCTACCGGTGTAATTGGTCAAAGGATAAAGAAGGGGGCACTACTAAACTCACTTCCTTTATTAGTGAATTCAATATCTTCTTCAGATGAGGGGGCAGATTCTGCAGCAGTGGCAATCACCACAACAGATCTTGTTAGCAAGAGTGTGGCAATCGAGTCTTTGGTTGGAAGAACAAAGGTCAGAGTTGGGGGAATGGCAAAAGGTTCTGGAATGATCCACCCAAATATGGCTACCATGCTTGGGGTGATAACAACAGATGCCGGGGTAACCAGTGACGTTTGGAGAAAGATGGTTCGGGTTGCTGTTAATCGAAGCTTCAACCAGATAACTGTAGATGGAGATACAAGTACTAATGATACTGTTATTGCTTTGGCTAGTGGGTTGTCTGGGCTAAGCAGCATTTCGTCTCTAGACAGTGATGAGGCAATTCAGCTTCAGGCATGCCTAGACGCGGTAATGCAAGGTCTTGCCAAATCTATAGCTTGGGATGGAGAGGGGGCAACATGCCTCATTGAGGTCAGTGTGACTGGTGCAAATAGTGAGGCTGAAGCTGCAAAAGTTGCTCGTTCAGTTGCATCATCTTCGCTTGTAAAGGCGGCTGTATATGGTAGAGACCCCAATTGGGGACGAATTGCCGCCGCAGCTGGTTACTCGGGGGTTTCTTTCAACCAAAATTTACTTAGGGTCGAACTGGGCGATATTTTACTAATGGATGGTGGGGAACCACAATCGTTTGACCGCCAGAAAGTATATGTACAACTTCTGATGCTGTGGAAGGGTATAACTTTACCATTACTATTGCATAAAGTTAAAGTGGTTGTAATCGAAAATGAAGATACACTCCAACACTTTGAATCAGTAAGATACGTGAAGTACTTTCTTTTTCTTTCTTTGTTTCTTTTCAAATTTAACGCTCACGAGGGTTTGTTTGTTTTTGAAGGGCACGAAAATCATGGAGTTTATGTGTGTAACAAATGTGGATGGCCATTCCCAAATCCACATCCTAGTGCTAAACACAGACGTTCTCACAAGAAGATCTGTGGAACCATTCATGGTTACAAACACCAACAAACAACACCAGGTTTGGTTGTGTCTGGTTCAAATAATGACAACCATGGAATTGAAGGGAAATTAATTAGGTCAGAAAGTGAGGTCTATTCAGATGCAGCTACTGATTTTTCAGATAATGGATTAAGTCCAGGAGTTAAGCCTATTTTGCAACAAGGAGATAATTTGGATTTGGACTCTGGCATTGATTTGGAAAGAGTCAACAACACAAAGGAACATACCCTTTTAGGGTCTTCCGAGGACAATGACTTTAATGCTGCAGATGAGAGTCTATCGATTGCCAACTCAAGCAATGACTGCCATATTCAAAATCCAAAAATCCCACCATCTGAAAGTTTTGAAGTTGGAAATACAGTTGGGTCGCAAGGTCAATTTTCAGTCTCTACTGTGGATTCATTAACAAGCTCAATTGCTGATTCGAAGACTGAAGGATCGAGTATTGTGCATGGTGATGGTTTTTCTGGTTTGTCAAGTGACTCAAGTCTCAGCAAAGCTGAAGCTGTGCCCGAAGTATTGTCAGAAAAAAATATCTATGCTGTTGAAAATGTGACAGATTCTAGTTTGATATGTGATGAAAAGGAGTCTAATTTGAAACGAAGCAATGAGGTAAAATCAGAAAGAGACATGGTTGAAATTGTGGAGCCAACCAATAGCATTGTAAATGATGGAGCTGTTAATCCGATGGAAAATAAGGGATCCGAGTTTGTTTCTTTGCTGCCCCAAAATGAACTTCCTCAAGAAATAAACTCGTCTATAATCACAAACGATACTCAGTTAGAATCTGCACATGCAATACAGTCTACTACTTGCAGTGATGTCAAGGTTTCACAGGAAAAGGAAGACATGAATGTTAATATTGATCCACTTCCTGTGCATGATGATAAACTTGATGTAGCCTATTCTCAGAGTGAGTCATTGAAACCCGAGGAAGATGTTACCAATGGAAATGATTTTCATTTCAACACAAGCCAATTGAGTGAAAGGAGTCATGTCATTTCTTCAGATGTGCGAATTTTGGATGGTAAAATGAAGGCGGATTCTGAAGATTGCTCTGAAGTTTCGTTGGTTGAGCTCACAACCGAAACTTATCAAAGAACGCATGAAATTGGGGTGTCTATGAAACCTGAGGTGAATGAGAATCATTTTTCTGAAGAGGATGGGCCTGGTGACATTGATGAAAATTCTCAACCCGAAAGTAGTTTAATGGTTTCGCCAAATGAATATCAGAGGGAGACATCCTTTCAGTCTGCGACTGACGACACATTCAACATAATCAATAATGACACAGCTGAAATAAATGATGTATCAGTAGATGGAAATATTGTAGGAGCTAATGTGGAAAATGACACTGAAGTTATAGTGAAAGATCTCCAACCTAGTGACCTCTTGCAACCAGAAGTTGAGCAATCAAGTGACTTATTTAGGAATAATAGCGATGATGCTGGTGAAACTGGTAAAATTGAAGGTGAAATCAATAGCAATATCAAATTGTCTGAAGAACATAACAAATCCACTGAACAAGATGCACAACTATCGGTGAATGCTGTGGGAGACTTGCATGAAGAACAAGATGCACAACTATCAGTGAATGCTGCGGAAGACTCACATGAAGAACAAGATGCACAACTATCAGTGAATGCTGCGGAAAACTTTTCCAGCAAGCATACACCACATTCTTCGACAAATACCGTTTCTTCTGTGCAACTCGATTCTGCTGTTGAAGATGATACTACTGGAGAGCCTGTTCAAGATCAAAGCAATAATAACTTGGTTAAACTTGGTTCATCTGGAATTGATACTTCTGCTGACTCACTTGAAGCGCGAGATGCACAACTATTAGTGAAGGCTATAGAAGACCTTGCGAGCAAGTATACATCAAATTCTTTTATAAATGCTGAGACTTCTGCCGCCGAAGATAATTCAGATGAAGTGACTAGAATTACTGCTGTGCCACTGCCTGTTCAAGATCAAAAAGTTAATAATTTGACTAAACTAACTTCACCTGGAACCGAGGCTTCGGTTGACTCTGGTAGCCGGCGCGACAGTTTGGATGGTAACTGGGGCTCTAGTTCAGTTATCTCGATGATATCTGATGCACCAGCTGTTCTTGATGGAGAAACCTTCCCATCAACCGGTCCGCAGGCATCGACAGAAGCAAGCAAATCAGATGTGAACATCCCACAGGCTGCACCTGCTGATAGACAGCTATCTGGAAAATCAGAAACGTTTGAGCTGCCATCTTTCACGACATTGGTTGAGCCAAGCCATGTGGCTGACGGTGCCGCAGCGGCTTCTGAAATCCAGAACCCACAACAGTCAAATTCCACCTCACAAGCTGCTTGGTTTCCAACTCTAAATCAGGTTATCAATGAGCCTCAAGGCAGAAAGAAGAACGAAGAAACAATCAGCAAGATAACAAAACGAAGCAGCAGTAAAGAACACACCCCTTTGAAGAGTCTCTTGGGTGAGGCCACTCATAGCAGCAGCAAGCCAAAATCACCAAAAATAGAAGAAAATAATAAAGGTTCTGGATTGACAACTGTTAACTCGATTCTTGGTCCTGAGTCCCCTTCGGCAGCTCAAACGGAGAAAGAAAAGGCTGCAAATGAATGGAACTCTCCAGCAAGATATCCTGCAAACATCAAGAGAGAAAAAAAGAAATTGAAGAGCAGACCATTTTGGATACAGTTGGTTTGTTGCTCAACAGTGGATCCCCAGAGACGTTATTATTTGCTCTCTATTGTTTTTTTAGTTTATCTGTCATTGGTTTTAGGTGAATATTTTAACGTGTCCAATATTGTTCTTGCTAGGAGTTTCGTTGTATATGTTGACCATCTTCAGCAAAAGACACAAAACCAACAAGAGGAAATAAAGAACTTGAGCACCCTTCTTCCATTGTTGGGTCAGAACAAATTCTGCTATAGTGCTATTGCTATGTCTGTCCGAAAGCATGATGTGTTCCTGAGCTTTAGAGGAGAGGACACTCGTGACAACTTCACTAGTCATCTTTATGCAGAATTACGTAGGAAAAACATTGAAACATTCATAGATAATAGACTTGACAGAGGTGAAGAGATTTCACCAGCACTGTACAGAGCAATAGAAGAATCAAAGATTTATGTGATCATTTTGTCAGAACACTATGCTTCTTCCAGTTGGTGCTTAGATGAACTCACAGAAATACTGAAATGTAAGGAGAGATATGGAAAGGAAGTGATACCGGTGTTCTATAAGGTAGATCCGTCAAATGTTAGGCATCAGGTACAGAGTTATGCAGACGATTTAGGTAAGCATCATCAACGATTTGGTGGTAAAGTGGACGCGTGGAAGGCTGCTCTAAACCAAGTAGCTGGATTCTCTGGTTGGGATTCACAAGTAACCAGGTCACTAATTTATTTCCATGCTCTTGCCATATTTATTAAACTTCATTTTTTCTGCAACTTATCATTCATGAGAGTTGTAAACTTTTTGTGTTTGGATCCCTATAGGAACCATTAG
Protein Sequence:
- >Tp57577_TGAC_v2_mRNA12188|Trifolium_pratense|C2H2|Tp57577_TGAC_v2_mRNA12188
MYSCSMIPQQHLSLHFHFSTTSPNSKTFAASRNNFKIRSVSTTNNQASTYIPAAPIFLPEGPWKQIPGGVTAAEGFKAAGIYGGLRAVGEKPDLALVTCDVDAISAGSFTTNVVAAAPVIYCKTTLDISNTARAVLINAGQANAATGEAGYHDMIECVETLAKLLGVKAEEILVESTGVIGQRIKKGALLNSLPLLVNSISSSDEGADSAAVAITTTDLVSKSVAIESLVGRTKVRVGGMAKGSGMIHPNMATMLGVITTDAGVTSDVWRKMVRVAVNRSFNQITVDGDTSTNDTVIALASGLSGLSSISSLDSDEAIQLQACLDAVMQGLAKSIAWDGEGATCLIEVSVTGANSEAEAAKVARSVASSSLVKAAVYGRDPNWGRIAAAAGYSGVSFNQNLLRVELGDILLMDGGEPQSFDRQKVYVQLLMLWKGITLPLLLHKVKVVVIENEDTLQHFESVRYVKYFLFLSLFLFKFNAHEGLFVFEGHENHGVYVCNKCGWPFPNPHPSAKHRRSHKKICGTIHGYKHQQTTPGLVVSGSNNDNHGIEGKLIRSESEVYSDAATDFSDNGLSPGVKPILQQGDNLDLDSGIDLERVNNTKEHTLLGSSEDNDFNAADESLSIANSSNDCHIQNPKIPPSESFEVGNTVGSQGQFSVSTVDSLTSSIADSKTEGSSIVHGDGFSGLSSDSSLSKAEAVPEVLSEKNIYAVENVTDSSLICDEKESNLKRSNEVKSERDMVEIVEPTNSIVNDGAVNPMENKGSEFVSLLPQNELPQEINSSIITNDTQLESAHAIQSTTCSDVKVSQEKEDMNVNIDPLPVHDDKLDVAYSQSESLKPEEDVTNGNDFHFNTSQLSERSHVISSDVRILDGKMKADSEDCSEVSLVELTTETYQRTHEIGVSMKPEVNENHFSEEDGPGDIDENSQPESSLMVSPNEYQRETSFQSATDDTFNIINNDTAEINDVSVDGNIVGANVENDTEVIVKDLQPSDLLQPEVEQSSDLFRNNSDDAGETGKIEGEINSNIKLSEEHNKSTEQDAQLSVNAVGDLHEEQDAQLSVNAAEDSHEEQDAQLSVNAAENFSSKHTPHSSTNTVSSVQLDSAVEDDTTGEPVQDQSNNNLVKLGSSGIDTSADSLEARDAQLLVKAIEDLASKYTSNSFINAETSAAEDNSDEVTRITAVPLPVQDQKVNNLTKLTSPGTEASVDSGSRRDSLDGNWGSSSVISMISDAPAVLDGETFPSTGPQASTEASKSDVNIPQAAPADRQLSGKSETFELPSFTTLVEPSHVADGAAAASEIQNPQQSNSTSQAAWFPTLNQVINEPQGRKKNEETISKITKRSSSKEHTPLKSLLGEATHSSSKPKSPKIEENNKGSGLTTVNSILGPESPSAAQTEKEKAANEWNSPARYPANIKREKKKLKSRPFWIQLVCCSTVDPQRRYYLLSIVFLVYLSLVLGEYFNVSNIVLARSFVVYVDHLQQKTQNQQEEIKNLSTLLPLLGQNKFCYSAIAMSVRKHDVFLSFRGEDTRDNFTSHLYAELRRKNIETFIDNRLDRGEEISPALYRAIEESKIYVIILSEHYASSSWCLDELTEILKCKERYGKEVIPVFYKVDPSNVRHQVQSYADDLGKHHQRFGGKVDAWKAALNQVAGFSGWDSQVTRSLIYFHALAIFIKLHFFCNLSFMRVVNFLCLDPYRNH*