Information report for Sphfalx0230s0010.1.p
Gene Details
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Functional Annotation
- Refseq: XP_024376932.1 — uncharacterized protein LOC112282945 isoform X2
- STRING: PP1S218_34V6.1 — (Physcomitrella patens)
- GO:0009630 — Biological Process — gravitropism
- GO:0009965 — Biological Process — leaf morphogenesis
- GO:0010601 — Biological Process — positive regulation of auxin biosynthetic process
- GO:0048444 — Biological Process — floral organ morphogenesis
- GO:2000012 — Biological Process — regulation of auxin polar transport
- GO:2000904 — Biological Process — regulation of starch metabolic process
- GO:0005634 — Cellular Component — nucleus
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0043621 — Molecular Function — protein self-association
- GO:0044212 — Molecular Function — transcription regulatory region DNA binding
- GO:0046872 — Molecular Function — metal ion binding
- GO:0046982 — Molecular Function — protein heterodimerization activity
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_39848
- Citrullus lanatus: Cla018661, Cla97C04G079800
- Daucus carota: DCAR_026826
- Gossypium arboreum: Cotton_A_39342_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D01G1332
- Lotus japonicus: Lj2g3v0635520.1
- Manihot esculenta: MANES_06G001400, Manes.06G001400.1.p
- Nicotiana benthamiana: Niben101Scf06687g00001.1
- Nicotiana tabacum: XP_016494721.1, XP_016500112.1, XP_016500111.1
- Rosa chinensis: RchiOBHm_Chr7g0177741
Sequences
CDS Sequence:
- >Sphfalx0230s0010.1.p|Sphagnum_fallax|C2H2|Sphfalx0230s0010.1.p
ATGCAGCAGCGGCAGCAGCAGCATTCCATCTTGGATTGGTCGAGAATCGAATGTAGTAAAGGATTGAAGGAGGTGGTTCCTGCGGCATATCTGCATCAATTTGATCAGCTTTACAGTACTTCCATGACCGCCAACCAGCTCCATGCGCATGCAGCGCACATCCTTCGCTTTAGCGCAGCGGCCGGTTGTGAGAATAATAATATTCATCATCATCCTAGTAGCAGTGTTGTTATAGAGAGCGGAAGATCATTGCAGCAGCAAGACACTGTGCTTGCTGCTGCTGTGGTTGCCCGTAGTACTACTACTGGTGGTGGTGGTGGTGATGGTCATCATGGGTGGAGTACTACTACTCCTGCGAGTTCAGGCGGGGGCAACAAGCGTAAGCGACGGCCTGCGGGTACACCTGATCCAGATGCGGAGGTGGTGGCACTGTCTCCAGAAACCTTGATGGAATCGGACAGATACGTTTGTGAAATTTGCAATCAGGGCTTCCAACGGGATCAGAACCTTCAGATGCACAGACGTCGCCACAAGGTACCATGGAAGCTGCTGAAGAAGGCTAGTTTGATCACCCACAAACGTGTCTATGTGTGCCCGGAGTTGACGTGCCTGCACCACGACCCTTCACATGCACTGGGCGACTTAGTTGGTATCAAGAAACACTTTCGTAGGAAGCACTGCAACGAGAAGCAATGGGTATGCGACAAGTGCTCCAAAGGCTATGCTGTGCAATCAGATTACAAAGCCCACTTGAAAACCTGTGGCACACGTGGTCATTGTTGTGATTGCGGAAGAGTGTTCTCAAGGGTCGAAAGTTTCATTGAGCACCAGGATATGTGCAATGCTGCCGAAGAGCAGAAGCTGGCCGAGAGCATGCAGCGGGGTGACAATGAAAAGCAGCACTTAAGGAAGTCATCCACGACCTTGCAGCACATGAGCAGTCCTATTACAACGGCCGGGCGCAGAAACATCCTGTCGAGCTGCAATGAGGAGAGCCCCAGTCAGTCCAGCGACACTACTGCAGCTCCATTTGCACATTCGGGAATCTCAGACAATACAGCTGCTTCTGCGGATTCCTCCAGATTGAATGAGCAAGTGATCAGTACCAAGACGTTCGACAGCAATAGCCACGAGGTCGAGGCCGTCAGTGCTGCTGTGGTCGCGGGGCCCACGTCCTGGGTTCATCACGAACGTCGACGGTGTATTGAATTGCAGCAACTCTTACCGTCCGCGACGCAGGCGCTGCATGAGAGATTGGAATCCTACTCCGAATCCGCGTTGCAGGCATCTAGCACTCCCCATGACACGAGACTCCTGGAAGCGGTCTCATCAACATCCCGCAGGTCTCATGCAGAGACCACTCGCGGACTTATAAGCTCCGAACTTTGTCCAGATATGTCCTTGTCGGCGGATTGCAAATCTCTAACTCCCGACTGTTGCCGAAGTATGGACGACGTGGTTAACACGCCACCATCTCTGCAGTTGACGATTGGACCTTATAGTAAGGAGTCGGCAGAGGTGAATATATCAAATGATCGAGGGTCGAACTACGTGAACACCCTCCAACCTGCTGGAAGTATGGACAGAAAACCCCATCTTGATGCGGGAGCGGATCACAGATTAAACGTGGTTGGTACAATGTCGAACTACCAACAATTGCAGCAAGATCGACCGGTTGATGCTGGTGAAGCTGCACAAGTCGTCAGGTCCGGTTGCAACAAAGGAATAGGCGAGGACTTAGCTCTTTCATTCCCAGCAGCAACCGCAGCTTCGGTACTACAGCCAGATGCTGCTGCTAGGAACGAAGCACTAGTCGTATTCGAAGAAGCAGGTGCAGGGAATGTTACAAAAGCCGTGACCATGAGCGTGAAAGAATTTCGAACCAGCCAAAGATCGAGACTTCCAGTTATTCGTGATGATTCAAGCACAACTACAGCTGCTAGGACGCAAGAACCTGCAATCAATGCTTTTAATCAGCAGGAGTCAAGTGCTGCACCACCAAGGAACAGTTCATATCCTCCTGTAATTATCAAGACAAGCAGATCGGCAAACTCCAGCTTACAATATACTCCTTCATATGCGGATCGTGGAAGCGGTTTGAAATCTCAAGTCGTGGACCTTGAGAGGACGTCCTTGGAATCAGAGACTGCAGCTGTGCGTGAGGATTTGATTTGGGCTGCTCAAAGGACAAGTAATATAGTTCAACTGCAGCCACCTCCTCAAGTTGCACAGCGTTCGACTCCTGAACCAGCAGCTGACAATCACCCCGGCGGTGGTCCCACACAATATGAGAAGCATGCACGTGGCCAGCAGCGGGGTATCTTCCATTCTGAATTTCTCATTGTTCCTCGCGCAGTCGAACGGACAGGCTCAGCAGCTTCCAGGCAAAACGAATTGGGTGCAACCGCCGCATGCGCTGATGAAGCAAACAAGGCAAGACTAGAACAGGCGAGGACAGAAATGAACTCGGCGTGGTTAGACCTGGCTGCAGCGAGACGCACCAAGGAGCAGGCGCGACTGGAGAGTACTGAAGCCCAAAACGAAATCGCACGGGCTGAAGTTTTAAAGCGCGAAGCGAGAGAGCAGATCCAACAAGCTTCCGCTGAGAAAGCATACGCAGACCACGCCAGAGACGTGGCCAAACGACAGATGGACATGGCAGAGGCCGAGCTTGCAGATGCGAAACGAATGCGCGAGCGGGCTCAAGCTGAGATCGACACATCGAGACTAATTCTGAAGGAGCAATCCGATCAATGCAGCTCCGTAGACGCGGCGATCATCAGGGCTAGCCCCCGTGATCATCAATCCTTGCGAAGTTCATGCTGCAGCTACGTCTGTCAAGTTTGCTGCAAATCAGACCAACCGGTGGGCAGGGACTTGTCTTTGGGGTTGCAACAGACTACAACCCACAAGTCTATACCAGTGCAGCCTGGCTTCGTTTCCTCGCATTGGCCAGGAACAAAGACCGATCACAAGATTCTCCTTTTACAAAACGCTTCCAACGAAATCCGCAATAGAGCAGCTGCTGCTGCAGGTCTTGTAAACTACCATACAGAGCGGGAAAATACGTTCGAGGCCGTCGCCGGCGCCAGATACGGTGACAATGATCATAACGCTAGTACTAGGCTCTTATCCCACATGATAGGGGAGTCATCAGCTGCATGCCGCAGGTGGTCAGCTGCTAGTCTGGCAGGAGTTACAGCAGCAGGCCGAGACGGCAGATGTAGTCCTGGGCTTTTAGCAGCCAACAGTATACCAGCTACTTTTGCAACTAACATGAGCTGCACTATAGAAGCGACGGGTAGTGTGAATCCTAGAACCAGCACTGATCATCATTCCCAATCTGGAAGCTAG
Protein Sequence:
- >Sphfalx0230s0010.1.p|Sphagnum_fallax|C2H2|Sphfalx0230s0010.1.p
MQQRQQQHSILDWSRIECSKGLKEVVPAAYLHQFDQLYSTSMTANQLHAHAAHILRFSAAAGCENNNIHHHPSSSVVIESGRSLQQQDTVLAAAVVARSTTTGGGGGDGHHGWSTTTPASSGGGNKRKRRPAGTPDPDAEVVALSPETLMESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKKASLITHKRVYVCPELTCLHHDPSHALGDLVGIKKHFRRKHCNEKQWVCDKCSKGYAVQSDYKAHLKTCGTRGHCCDCGRVFSRVESFIEHQDMCNAAEEQKLAESMQRGDNEKQHLRKSSTTLQHMSSPITTAGRRNILSSCNEESPSQSSDTTAAPFAHSGISDNTAASADSSRLNEQVISTKTFDSNSHEVEAVSAAVVAGPTSWVHHERRRCIELQQLLPSATQALHERLESYSESALQASSTPHDTRLLEAVSSTSRRSHAETTRGLISSELCPDMSLSADCKSLTPDCCRSMDDVVNTPPSLQLTIGPYSKESAEVNISNDRGSNYVNTLQPAGSMDRKPHLDAGADHRLNVVGTMSNYQQLQQDRPVDAGEAAQVVRSGCNKGIGEDLALSFPAATAASVLQPDAAARNEALVVFEEAGAGNVTKAVTMSVKEFRTSQRSRLPVIRDDSSTTTAARTQEPAINAFNQQESSAAPPRNSSYPPVIIKTSRSANSSLQYTPSYADRGSGLKSQVVDLERTSLESETAAVREDLIWAAQRTSNIVQLQPPPQVAQRSTPEPAADNHPGGGPTQYEKHARGQQRGIFHSEFLIVPRAVERTGSAASRQNELGATAACADEANKARLEQARTEMNSAWLDLAAARRTKEQARLESTEAQNEIARAEVLKREAREQIQQASAEKAYADHARDVAKRQMDMAEAELADAKRMRERAQAEIDTSRLILKEQSDQCSSVDAAIIRASPRDHQSLRSSCCSYVCQVCCKSDQPVGRDLSLGLQQTTTHKSIPVQPGFVSSHWPGTKTDHKILLLQNASNEIRNRAAAAAGLVNYHTERENTFEAVAGARYGDNDHNASTRLLSHMIGESSAACRRWSAASLAGVTAAGRDGRCSPGLLAANSIPATFATNMSCTIEATGSVNPRTSTDHHSQSGS*