Information report for Sphfalx0091s0092.1.p
Gene Details
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Functional Annotation
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Glycine max: Glyma.09G170200.1.p, Glyma.07G107500.1.p
- Gossypium arboreum: Cotton_A_07623_BGI-A2_v1.0
- Lotus japonicus: Lj4g3v2401010.1
- Manihot esculenta: MANES_17G090100, Manes.17G090100.1.p
- Musa acuminata: GSMUA_Achr7P18610_001, Ma07_g19940
- Populus trichocarpa: POPTR_010G101200v3, Potri.010G101200.1, Potri.008G140400.2, POPTR_008G140400v3, Potri.008G140400.1
- Rosa chinensis: RchiOBHm_Chr7g0177741
- Sesamum indicum: XP_011083211.1
- Ziziphus jujuba: XP_015895353.1
Sequences
CDS Sequence:
- >Sphfalx0091s0092.1.p|Sphagnum_fallax|C2H2|Sphfalx0091s0092.1.p
ATGATGCAGCAGGACATAGCTGCTTACAGCAGCAGCAGAGACTGCAGCACGTCGTCAAGCGCCGCCTGCATGATCAAGCTGCTGTCTGATCATGAATCTGATGGAACTGGCGCTCCTGCTGATGATGATCACATTGCTGATCGATCTGTGTTCTTTGAACAGCTTCCTGCCGGCGCGGCAGCACCTGCACTCGCCGGAAGTCCACCTAATGATCTTGTGTCGACTCCGGCTAGTCCTCCTCCGACTAGCGCCAATGGTACAATCAACAAGAAGCGCAAGCGACGACTTGCAGGAACTCCTGATGCGGATGCGGAGGTGATCGCACTGACTCCCAAGAAGTTGTTGGAGTCGGATCGATACGTGTGCGAGATCTGTAGCAAGGGCTTCCAGCGTGACCAAAACCTCCAGATGCACAAACGCCGACACAAGGTACCGTGGACGCTGCTGAAGAGGGGTAGTACTACAGCAGCTCCTGCTAATTCGACTAACGAAGTGCAGCAGCAGCGCAAGCGCGTATACGTATGTCCGGAGGAGTCTTGTCTGCATCACAACGCCTGCCATGCGCTGGGCGACCTTGTGGGCATCCGAAAACACTACCGCAGAAAGCACAGTACTGAGAAGCAATGGCAATGCACCAAGTGCTCCAAAGAGTACGCTGTGCAATCCGACTACAAAGCTCACCAGAAGACTTGCGGCACCCGCGGCCATTCCTGCGACTGCGGTCGCGTTTTTTCCAGGGTAGAGGGATTTATCGAGCACCACGATAAGTGCGTGGCGCTCCTGGGCAAGGAGAAGGCTGCTGCTGTTGTCGCAAACAGCAGCGACATGAGTCGAACACCAGAATCATGTACTGATCATCACGGCCAGATGAGCGCGGATATTCAGCAGCAGCAGTTGATGTCGGGATGGAATCTGATGACACCAGCTCTTGAATACGCGGAAGCTCCTAGAGACTTTCAAGGCTCGGTTCAAGAAAAGTATGCAGCGGCGGCATGGTCTGCTGCAGCTCCAAGTCGTCAGTGCCTTGCGGGGATCGAAGAATTCAATCCAGCTAGGTCGACGACCGCGCCCTGCTCGATTGCCGCCACTTCCTGGGCTGAAAGTCGTCGAGGAGCTGGGGGGCTTTTCCAGGAGATGCAGGCGGGCCCATTTCTTCGTGCTGCAAATTCGCACTGGTCGCCGATGTGGTTCGACCCTGCAAGGTTCCACGATTTGCAACCGGGATCCGTGAACTCGACGACTACAAACCAAAACTATGGTACTCGTGCCGCAGCGGCTCCTTCTGATCATCAACCTGCAGCAGCAGGTCCATGTGCGACGATCACTGATCAGCTGTTTCCGACCGATCACGATGCATCTTTACGTCTCTCGATCGGTCCTTCCCACCCGCTTGTTGAAGTCTTAACGCCTGCCAAGCTTTCTCGGGAAGAACAGAAGCGTGACTTGATTCTGATAGAAACAAAGCCGAAATTGGACATGTCCGCCTACCTCCAAAGGATACGAAGCAGATCATGTGTGGATCCTGATGTCGAGAATTATCGGCTTCTACCTCCTGCTGCTGGCCGCGAGGTGGTACTGGACGTATCAGCTGCTGCTGCTGCTGCTGCTGCAGGTAGCAATGAATCGCGTGCTGCCACTGCTGCAGGTCGGCGTGCAGATCATGATTATGAACTGAATATTTCAGCACGACGAGCTGCCCAAATTAGTACTGCTGATGGATATTATTCTTCGCGTATCCAGCTTCTTCAGAAGCAAAGCGATTATAATTCTCCGCATGCAGAGCTGCAGGTTCTGCAAGCTGCAGGAAGCTGCTGCAATTACTCGAGTCGGCCTCCAGCCGCAGCAGGAATCACAGCTTTTCGATCTCTTGCCGGAGCTGCTGGCGAATACGCAGCAGCTGCTGCAGATCAGTACGGATCCACACATGAAACAGCAGTACTAGGGTCGAGTACAAGGGAATGTTGGATCCCAAATCCAACTTATAACTGCAACACTAGTACGTCTACTAGTCTAATTAGCAGATCCTCTACGACATCAAATATGATACTGGGCTCGCGGGAAGTCAGTCGTGTTCCAGATCAGCACAATTCGACAATTGGAGCTGGTGCTAGCGGTCCAACCAAGACTGCAAGGTCGCTCATGCTGCAGCAGTACTGGATCAGCCCCAAGTAG
Protein Sequence:
- >Sphfalx0091s0092.1.p|Sphagnum_fallax|C2H2|Sphfalx0091s0092.1.p
MMQQDIAAYSSSRDCSTSSSAACMIKLLSDHESDGTGAPADDDHIADRSVFFEQLPAGAAAPALAGSPPNDLVSTPASPPPTSANGTINKKRKRRLAGTPDADAEVIALTPKKLLESDRYVCEICSKGFQRDQNLQMHKRRHKVPWTLLKRGSTTAAPANSTNEVQQQRKRVYVCPEESCLHHNACHALGDLVGIRKHYRRKHSTEKQWQCTKCSKEYAVQSDYKAHQKTCGTRGHSCDCGRVFSRVEGFIEHHDKCVALLGKEKAAAVVANSSDMSRTPESCTDHHGQMSADIQQQQLMSGWNLMTPALEYAEAPRDFQGSVQEKYAAAAWSAAAPSRQCLAGIEEFNPARSTTAPCSIAATSWAESRRGAGGLFQEMQAGPFLRAANSHWSPMWFDPARFHDLQPGSVNSTTTNQNYGTRAAAAPSDHQPAAAGPCATITDQLFPTDHDASLRLSIGPSHPLVEVLTPAKLSREEQKRDLILIETKPKLDMSAYLQRIRSRSCVDPDVENYRLLPPAAGREVVLDVSAAAAAAAAGSNESRAATAAGRRADHDYELNISARRAAQISTADGYYSSRIQLLQKQSDYNSPHAELQVLQAAGSCCNYSSRPPAAAGITAFRSLAGAAGEYAAAAADQYGSTHETAVLGSSTRECWIPNPTYNCNTSTSTSLISRSSTTSNMILGSREVSRVPDQHNSTIGAGASGPTKTARSLMLQQYWISPK*