Information report for Sphfalx0045s0073.1.p
Gene Details
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Functional Annotation
- Refseq: XP_024365599.1 — protein indeterminate-domain 1-like isoform X1
- TrEMBL: A0A2K1L2D8 — A0A2K1L2D8_PHYPA; Uncharacterized protein
- STRING: PP1S165_3V6.1 — (Physcomitrella patens)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_13499, C.cajan_13378
- Cucumis melo: MELO3C027244P1
- Vitis vinifera: GSVIVT01016867001
Sequences
CDS Sequence:
- >Sphfalx0045s0073.1.p|Sphagnum_fallax|C2H2|Sphfalx0045s0073.1.p
ATGACATTGTCCAACATAACCTGCAGCGCATCAGCTGGGGAAGCAAGCGGCTCGTCTGGAACTCGCACAACAGATGATGGCAACACAGCGCCGCGGGCAGCAACGCCTGCTACCACAACCACCACCGTCTCCAGTGGGCAACCTCCTGGACCAGGACAGAAGCGGAAGCGGAATCTGCCTGGAACTCCAGACCCGGAGGCGGAGGTAGTAGCGCTGTCGCCCAAGACATTGATGGCGACCAATCGCTTCGTGTGCGAGATTTGCAACAAAGGGTTTCAGCGGGACCAGAACCTGCAGTTACACCGACGGGGCCACAATCTGCCCTGGAAGTTGAGGCAGCGGAGCAGCAAGGAGATCATCCGCAAGCGCGTCTACATCTGCCCTGAGACCTCCTGTGTGCATCACGACCCGTCGCGCGCTCTGGGCGACTTGACTGGCATCAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCTCCAAGCGATACGCTGTTCAATCCGACTGGAAAGCCCATTCCAAAACTTGCGGCACTCGAGAGTACCGCTGCGATTGTGGAACCCTATTTTCCAGGAGGGACAGTTTCATCACCCATCGAGCCTTTTGTGATGCCTTGGCAGAGGAGAGTGCTCGAGTCTCAGCAGGCAAACAATATGGTGGCAGTGGTGGTGGAGACATGATGAGCAGCAGTAGTATGATGATGCAGGCAACTCAGGTAGGTGGCTCCATGTCAGTCCTTGCAGGCACACTCAGCTTGACCTCCTCTCCTCACCATGGAAACAACATGAATTTGGGCCGGGTGAGTGCAGACTCTTTGGCATCCATAGCTGCTGCCACTGGGGGGGGAGGAGGATCAGGATCAATGCAGAGGCAAGCACCTCTGGCACCATCCATGGGAGGTTTAGGAAGGCTAGGGCATGAAGCAGCTGGGCTTTCATTGCTGCCACCACGATGGGGTCAAGCTGTTGGGAATGCAGGAGCAGCAGCTCCTGCCACAGGTGCACCAGGTCCTAGGCTATCACTATGGTTAGGATCTGGTCCAGGACCAGCTGGGGGACTTCCAGCTCCTGGTTCACAACAGGTGCAGTTGCTTCCTGCTGCTTCAGATGTTTCTTCTTCTTCTCCTTTTCTGATGCAACCTCCAAAGGTGGCTATGCATGATGGAGGAGCAGCAGGACTGCAGCCTGCAATTCTGAATCCTCTTGAATATGATATTCCACAAGCCCCTAGACCCACCTCATCTAGTGGACTTCTTCTACCAATGGTTTCATCTGGAACCGGGAGCCTGTTTGCACATCTGTTTTCATCTGCTCCAGGGTCGACAATGCCAGGGTTGCATGGAGGCAGCAGCAGCACTAATAATAATATTCCAGCAAACAATGCAGGTGCTGGTGCAAGCATGCTGCAGCAGGGGGGGATGGGCATATCTGGGTTTTCAGACTTCACAGCTGGTGCCAGTCAAACAGAGCGAGGAGGAGGAGGCTCTGCAACAGCAGGATTGTCTTTATCTTCATCCCTCTCTGCAGGCTTGTCGAGTTGTTCCTCCTCAGCTTATAATGATGGGGTAGGCAGTGTGCCCTCAGTATCTATGCTCTTCAATCATCAACAGCAACAACAACAGCAGCAACAGCAGCACACAGCAACTGCTCAAATGTCTGCAACAGCCTTGCTACAGAAAGCAGCACAGATGGGTGCAACTGCTAGTAGTTCTTCATCCTTGCTACGAGGTTTTGGTGGAATGGGTGTGCCAGGAGATTCAAGTTCCATGTCATTTTGGCAAAGCCAACAACAACGAATGCAAGATCAAGGCAGGGGCACAGTTGAGCTTCCACCCAACAAGTTAAGTATGGTGCAGTCTTTGCAGCAGCAGCAGCAGATCAGACGGCCAATTGACATATCTTCAGGAGGAGGTCCTTTGGGAGTGGGCACATCAATGGGTACATCTAACTTTGGAGGGAGCCAAGTAAGGCCAACAAATGATCATCATGTGGGGGGGGCAGCAGCAGCAGGGATGCAGGACTTCATGAATTCATTATCAGGAGGTGCTGGTCTGTTTGTAGGACCCTTGAGCAATATGCCATCCATGTTTGGACCCAATTCTGGAAATGTCACAGGAGGAATGATGCAGCCTCCTAATAATCATCATCATCATCATCATCATCGGATGTTGCCCAATGATGTCATGGCGCACCACCATAATAACAACAACCCATACCACTCTGGGGGAGGAGGAGGTCCCATGTCTCAAGGCATGGGAGGCCAGCCTTCTTCCATGCTGCCAGGTCTTGGTGGTTCAACAAGGGGGGAAGATGGAAGTGACAGATTTACACATGACTTCTTGGGGGTCGGTGGAGCTCCGAGTGGAATGGCTGCTGCTGCTGGAGGCATGGGACGGACGCTGTCTCAACGAGATTTGGCTAGTCTTGCATCATTGGGTCCAGGGGTTGACCTCGGAGCTATTTTCAATCAAAGAGAAAACTTGCGCTCGGTTGGTGCAAGTGTCCATTCACCAGCAAAATCATGGGATGCTTCCTAA
Protein Sequence:
- >Sphfalx0045s0073.1.p|Sphagnum_fallax|C2H2|Sphfalx0045s0073.1.p
MTLSNITCSASAGEASGSSGTRTTDDGNTAPRAATPATTTTTVSSGQPPGPGQKRKRNLPGTPDPEAEVVALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEIIRKRVYICPETSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARVSAGKQYGGSGGGDMMSSSSMMMQATQVGGSMSVLAGTLSLTSSPHHGNNMNLGRVSADSLASIAAATGGGGGSGSMQRQAPLAPSMGGLGRLGHEAAGLSLLPPRWGQAVGNAGAAAPATGAPGPRLSLWLGSGPGPAGGLPAPGSQQVQLLPAASDVSSSSPFLMQPPKVAMHDGGAAGLQPAILNPLEYDIPQAPRPTSSSGLLLPMVSSGTGSLFAHLFSSAPGSTMPGLHGGSSSTNNNIPANNAGAGASMLQQGGMGISGFSDFTAGASQTERGGGGSATAGLSLSSSLSAGLSSCSSSAYNDGVGSVPSVSMLFNHQQQQQQQQQQHTATAQMSATALLQKAAQMGATASSSSSLLRGFGGMGVPGDSSSMSFWQSQQQRMQDQGRGTVELPPNKLSMVQSLQQQQQIRRPIDISSGGGPLGVGTSMGTSNFGGSQVRPTNDHHVGGAAAAGMQDFMNSLSGGAGLFVGPLSNMPSMFGPNSGNVTGGMMQPPNNHHHHHHHRMLPNDVMAHHHNNNNPYHSGGGGGPMSQGMGGQPSSMLPGLGGSTRGEDGSDRFTHDFLGVGGAPSGMAAAAGGMGRTLSQRDLASLASLGPGVDLGAIFNQRENLRSVGASVHSPAKSWDAS*