Information report for Sphfalx0010s0016.1.p
Gene Details
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Functional Annotation
- Refseq: XP_024375541.1 — DNAJ protein JJJ1 homolog isoform X1
- TrEMBL: A0A2K1KIA0 — A0A2K1KIA0_PHYPA; Uncharacterized protein
- STRING: PP1S72_296V6.1 — (Physcomitrella patens)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brassica napus: GSBRNA2T00092355001
- Brassica oleracea: XP_013620746.1, XP_013620745.1
- Citrus sinensis: orange1.1g007551m
- Manihot esculenta: Manes.06G085000.1.p
- Nicotiana tabacum: XP_016489214.1, XP_016505864.1
- Raphanus raphanistrum: RrC232_p2
Sequences
CDS Sequence:
- >Sphfalx0010s0016.1.p|Sphagnum_fallax|C2H2|Sphfalx0010s0016.1.p
ATGACCCCACCAGTGCAAGGCCTGCAAGAGTGCTTGTATGATGTCCTAGCAGTGGAACGGACTGCAACCCCCGATGCATTGAAAATTGCTTACAGGAAACAGGCTATGAAATGGCACCCTGACAAAATCCAGCAAAGTGGAGCCAATCCAGAAGCTTACCAGGAAGCAACAGTTCGTTTCCAGTTAATCTCTCGAGCTTATGAAGTACTTTCAGATCCAGTAGAACGAGCTTGGTATGACTCTCATCGGTCTGCTATTCTTTCATCTGCATCATCTTCTTCAAATGCAGCTCCAGGCGAGTTTGAGTTCAATGTCTGGCCATACTTCTCACCGACTGCTTTTTCAGGATTTGGTGAGACTGGGAAAGGATTTTATGCTGTATATGGTGAAGTATTCAGGAAAGTGCATCTGCAGGAGCAGATGTTTGCTCGTGTTTATGGAACTGGATCTGTTAGAGAGGCTCCAGATCTTGGAGGTCCTGGTACACTGTATGCAAATGTCACTGTATTTTATAACTATTGGCAAGGATTTACAACTGAGAAGGACTTTGGATGGTGTGATGAGTATGATGTCATGCAAGCACCAAATAGAAAGGTGCGCAGGCTGATGGAGGAGGAGAATAAGAAGATCAGAAAACGAGAGCGAAGGGAATATAGTGACTCTGTTCGACAATTAGCAGCTTTTGTGAAGAAACGTGACAAACGAGTGAGGGAAAAGCAGCTGGAGCTCCAAAGGATTCAGAAAGAGAAAGCCGAGATGCGAAAGCAGCGTCAACTACAACTTGAGAAAGAGAAACAAGAACAGGTCCGACGTTATAAGGAGCAAGACTGGACAAAACCATCTGAAGATGATTATAGTGATGAGAGTGAAGATGATGGCTTCCTTGAGGATGATTGGGACCGTGCTGGCAAAAACAAAGAAATCCCAAAGGAAGATGACTCTGAAGAATTTCATTGTATAATTTGTGGAAAGCATTTTAGATCAGCAAAGCAATGGAAAAACCATGAACAATCTAAGAAACACATAGGACGAGTTTCAGCATTGAAGGATGCCTTCATGGAAGACGATGAGCAAGTAGAAATGCTGGGGAGGCACCTGGGAGTTGAGGTTCCTGCTGCCAGGCAAGAACGTGAAGCAATGTCTGAGATAGACAACAGGCAGACCACCATTGGTGCTGACTCTGAAGAAGAGGTTGATGATATATGTGAACTTGACAGTGATCCCTCCAGCAATTTCCAACAAGATGATACTGGGCAGAATGGGCCAGAAGTTGTAGACCTTGAGCGAAGTCATCCACAGTCTGACTCTGTTGATGAGGAAAATGACAGTAATGAGGATGATGAAGATAGCATGCTTGCAGCTATGCTTAAATCACACTTAAGACAGAATACAGCCACTAATGTGTCTACAGAGAGGTCAGAGTCTGGAACTGCAAATGGCAGCATAGAGATTGAAGAATTTACCGAACATTTTTCACCACCTCCTTCACACAATGACACTGGACATTGTTCTAATGAGGATGGTGAGAAGGATGAGAATGATGATGAGCATGAAGATAGTATTCTTGCAGCTATGCTAAGCTCTCAAAAGAACAAGCAAAAAGCTGTTGCTGCTGACAGAGTTGAGATAGTATCTTCTGTGGAGGATGGTGACACACATAAGGACAATGAGACCAACAATTTTGAAGAAGCAGGTGTGTCAGTTTCTCAGGATGAATTCACTGTGAAAGACAGTTATCCAAATAAGGAGGTGGGGGAGAGTGTGGGAAAGGGCAAAGCAAGGAGAAGAGCTAAGCAGGAAAAAAAGCAGGCAGCTGTGTTTGACAGGCATGCTGCAACAGCAGCAGAACTTGCATCAAAAGAACAGATGCAAGGAGAAGTATTAGATAATGACAGTAAAGTGGATAGAAAAGATGACTTACCCCCCACAGAAGTCTCCAATGCTGAACAAGGGTGGGAAGAATCTATGAGACTAAAGGAAATAGCCCAGCAAAACCGTTCAAAGCTAAGTCAGAGAGGGAAGAAGATGAAGAAGGGAAAGGGAGAAGCCAAGCAATACGCACACACTTGTCAGACTTGTGGTCAAGATTTTGAATCAAGATCTCAGCTGTTCAAGCACATTACAGCCACCAACCATGCTGTTTTGAAATCAAAGTAG
Protein Sequence:
- >Sphfalx0010s0016.1.p|Sphagnum_fallax|C2H2|Sphfalx0010s0016.1.p
MTPPVQGLQECLYDVLAVERTATPDALKIAYRKQAMKWHPDKIQQSGANPEAYQEATVRFQLISRAYEVLSDPVERAWYDSHRSAILSSASSSSNAAPGEFEFNVWPYFSPTAFSGFGETGKGFYAVYGEVFRKVHLQEQMFARVYGTGSVREAPDLGGPGTLYANVTVFYNYWQGFTTEKDFGWCDEYDVMQAPNRKVRRLMEEENKKIRKRERREYSDSVRQLAAFVKKRDKRVREKQLELQRIQKEKAEMRKQRQLQLEKEKQEQVRRYKEQDWTKPSEDDYSDESEDDGFLEDDWDRAGKNKEIPKEDDSEEFHCIICGKHFRSAKQWKNHEQSKKHIGRVSALKDAFMEDDEQVEMLGRHLGVEVPAARQEREAMSEIDNRQTTIGADSEEEVDDICELDSDPSSNFQQDDTGQNGPEVVDLERSHPQSDSVDEENDSNEDDEDSMLAAMLKSHLRQNTATNVSTERSESGTANGSIEIEEFTEHFSPPPSHNDTGHCSNEDGEKDENDDEHEDSILAAMLSSQKNKQKAVAADRVEIVSSVEDGDTHKDNETNNFEEAGVSVSQDEFTVKDSYPNKEVGESVGKGKARRRAKQEKKQAAVFDRHAATAAELASKEQMQGEVLDNDSKVDRKDDLPPTEVSNAEQGWEESMRLKEIAQQNRSKLSQRGKKMKKGKGEAKQYAHTCQTCGQDFESRSQLFKHITATNHAVLKSK*