Information report for Sphfalx0004s0089.1.p
Gene Details
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Functional Annotation
- GO:0009736 — Biological Process — cytokinin-activated signaling pathway
- GO:0009740 — Biological Process — gibberellic acid mediated signaling pathway
- GO:0010090 — Biological Process — trichome morphogenesis
- GO:0005634 — Cellular Component — nucleus
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0044212 — Molecular Function — transcription regulatory region DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Citrullus lanatus: Cla000141
- Cucumis melo: MELO3C005347P1
- Cucumis sativus: CsTu, CsZFP6, Cucsa.280790.1
- Glycine max: Glyma.19G214600.1.p, Glyma.03G217900.1.p
- Lotus japonicus: Lj5g3v2182590.1
- Nicotiana benthamiana: Niben101Scf24149g00005.1
- Nicotiana tabacum: XP_016489116.1, XP_016445044.1
- Ricinus communis: 30205.m001591
Sequences
CDS Sequence:
- >Sphfalx0004s0089.1.p|Sphagnum_fallax|C2H2|Sphfalx0004s0089.1.p
ATGACAAACTTAGATGTGGAATTCTTCTCATTGCTTAGGAGGAGGAGATCTTCAGGCTCGCGGAAACAAGGTTATGAAGAAGAAGAAGGCGACGACGAAGAGGCTTTTTGTTGCAGTGAGAGTGAGAATAGCTGTGACGACGGCCAGCAGGAGCAAGAGGAGTATGAGATTGCTGCCTCGATGAGTTTCAGTAGTAAAAGGCATAGGGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGCGCATGGACGCGGCGGTCGCGAGTTTGAAGAAAGATCAAAGCTCCACCTCGCACCTCACTCTGTATTACTTGCGGTAGGCTTGCAGCAGCAGCAATCTGCAGATGATGAAGAAGAACAAAAAGAAGGAGATGAAGAAGAACAAGAACAAGAAGAGCCGCTTCTTTCGCACAAGAGTTGCGTGCAGCTGGACTCGAGGATCACCATGACCACGGGGAAGCAGGTAGATAGGAGGCGAAAGGAGTTGAAGAACTTAGGACAATGTTCTGAGGCGTTTCTGGAGCCATCGCTTCTCGCATGTGCGCGTCATCGAGGAGGCTCCTCCCAGATCTCTATCAGCGGCGATAAGGAGGAGGAGGAGGAGGACGCATTCCAGCAGCTTCCTCTTGAGGAACAGGATGCAGATGGAGATGCAAAAATGCAAAAGGATTCGATCCTAGCATGTGGAGCTGAGAGAGGAAAGCTGGATCACGACGATGCAGTCGGGAAAGAGACACAAGGACTCAATGCCAGCGTTGTTCCGTCAAGAGGCGACGATCAAAGTACACTGCAGCAGCAGCAGCTACCGCGTGCAATTTCTTTCTTCAAGGAGATTAAAGAGAATTCTTCTGCAGATCTTGATCTGGGGGGCTGCTTCTTCCGCGATGATGTAGGAGAGGAAGAAGAAGAAGAATATACGTCAGAGCAATATTGTCCGGATCCATCCTCGTGCTCATCACCAAGAGCTTCTTCAGCCCGCCGTTGCAGAAGGGATCATCAGGATTTTGTCAGAAAGACAGGTGGTGGCCAGGAAGAAGTTGGATCAAGAGGAGCTCAAGCTTCTTGTGGTGGTATAGATTTCCTCCAGTTAGAGACCAGGAAGCCCTGGCTATCGATGGGAGGAGGTGCACAACAGAACAGAGTGGCAGGAGGAGGAGGAGGAGGAGAAGCCGTGAGACTCTTTGGTTTTGAGATGAACTGGCGATCTATGTCAGGCAGAAGCAAAGACAAAGAAGAGGAAGGCTGCACAGAGAATATTGGCAGGAGCAATAGAGAGAAGGAGCAGCAGCAGCAGCAGCAAAAGGGGTCACAGCAGTCTCTTCCTTCCTGTTCTAGTGAAGGGGCTTTAGACATTGACACGGTGCCAGAAGATGCTGGTGAGGAGGAGGAGGCTGCTGTGGGAGTGCAACCAAGCAAGGATAGTGGAGTAGAAGCTGGCAAGCTGCAATGTTCATCCATGTCAATGCCGAGTATCACAAACCAGCCAACAGAAGGTATAAGTGTCTGCTCAGGTTCTACAAGAGTGACCTCCAAGGAAAATCGCAAGTACGATTGCCACTTTTGTAAGAAGGAGTTTTCAAGCTCTCAGGCGCTAGGTGGCCATCAAAATGCTCACAAGCGGGAGCGTAAAGAGGATAGACGAGCACAGTTGCAGGCCCACCGCATGGCTGCAGCAGCAGCTGCTGCTGCTGCTGCAGCAAATGCCCACCGAGACTGTGGTGAGATGGCAGGATACAGCACCACACAACACTCTCTTCTTCCTGGCTCGCAGCTGCTGCAGCAGCAGCACCCTCATGGATCACACCTGTTTGCACCACCACCTGGATCAGGCCTGATTGTTCCAGGTCAGGCATATCCTCATCCTAATTTTTCTTTGCAGGGATGTGTGAATCCTCCACCGATGCCAGAAGGTATGCAAGCTCCTCCTCCAGGCTCAATCTTCTATGCTGGCCCTGTTGCAATTGGCTTCCCTGGATCTAGACCATCTTTCCCAACAGTGTTTGGTGACCTTGTGCAATACAGTGACACCATTGACTATGTGCAATACCATCCCTCAGCATGTTTCCAACAGGTGATCCATGGTTTTGATACCACTGTCAGCAATAGTGGGTGA
Protein Sequence:
- >Sphfalx0004s0089.1.p|Sphagnum_fallax|C2H2|Sphfalx0004s0089.1.p
MTNLDVEFFSLLRRRRSSGSRKQGYEEEEGDDEEAFCCSESENSCDDGQQEQEEYEIAASMSFSSKRHREEEEEEEKEEAHGRGGREFEERSKLHLAPHSVLLAVGLQQQQSADDEEEQKEGDEEEQEQEEPLLSHKSCVQLDSRITMTTGKQVDRRRKELKNLGQCSEAFLEPSLLACARHRGGSSQISISGDKEEEEEDAFQQLPLEEQDADGDAKMQKDSILACGAERGKLDHDDAVGKETQGLNASVVPSRGDDQSTLQQQQLPRAISFFKEIKENSSADLDLGGCFFRDDVGEEEEEEYTSEQYCPDPSSCSSPRASSARRCRRDHQDFVRKTGGGQEEVGSRGAQASCGGIDFLQLETRKPWLSMGGGAQQNRVAGGGGGGEAVRLFGFEMNWRSMSGRSKDKEEEGCTENIGRSNREKEQQQQQQKGSQQSLPSCSSEGALDIDTVPEDAGEEEEAAVGVQPSKDSGVEAGKLQCSSMSMPSITNQPTEGISVCSGSTRVTSKENRKYDCHFCKKEFSSSQALGGHQNAHKRERKEDRRAQLQAHRMAAAAAAAAAAANAHRDCGEMAGYSTTQHSLLPGSQLLQQQHPHGSHLFAPPPGSGLIVPGQAYPHPNFSLQGCVNPPPMPEGMQAPPPGSIFYAGPVAIGFPGSRPSFPTVFGDLVQYSDTIDYVQYHPSACFQQVIHGFDTTVSNSG*