Information report for Sme2.5_04747.1_g00001.1
Gene Details
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Functional Annotation
- Refseq: XP_006363322.1 — PREDICTED: uncharacterized protein LOC102598349 isoform X1
- TrEMBL: A0A3Q7HLU1 — A0A3Q7HLU1_SOLLC; Uncharacterized protein
- STRING: XP_009758251.1 — (Nicotiana sylvestris)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Sme2.5_04747.1_g00001.1|Solanum_melongena|C2H2|Sme2.5_04747.1_g00001.1
ATGGATGTCATCGTCAACAAGTCAAGATTGGAGATTATGCCAGTAGATACAACTAGGACAGTCTCAAATGGGACAATTTTTGAGAAAGATCTCAAAAATTCTCAAGGTGCATCTGATAAGCTGTCAATCCCCGTTTCCGATCCAGGGCATTGCATCTTTATTTCCAGTTACCGATCTAAGGCATTGCATCTTCATTTCCAGTTGCTAATCCAGGGCATTGCTATTTTATTTCCAGTTGCTGATCCCGGGCATTGCATCGCCGATAAGGCTATTTTATTTCTAGTTGTCGATCCAGGGCATTACATCTTTGTTTCCGGTTGCCGATCTAGGGCCATTGCATCCAGAGCACCATCCTATTTTCAGTTGCACCCAAAGCGCCATATTGATTCGTTATTCATCACACCAAAGAGAAGAATACATGTCAAATATGGTGCCATCATGCCAAATTTTTGGGTCGTGACATTCACGAACACAGAGAAAGAGGGAGAGAAGACCTTCGCGAATGCGTGGCCCACACCCACAAAGGAGGGGAAAGGTGATAGAGATATCAAGCTGGGTAAGTGGGCACACTCCGAAAACCATCGTGATTTTGGTTATTGCAGGCGGTTCAGAGTTGAGGAGGCAAGCTATGAGAAAGGAACCCCTACAAAGAATGGGGGAAGGTCCTGCTCAATGGATGCAGTGGCTTCATTCTATGGATCAGTCAGGTATCCTTTAGAGAACCCTATTCAAGCCCGTTATCTTCCCACGAAGAAACTATCCTGCCATCTTCTGATCTTATGCTGTAATTCTCTCTTAGCTTTGATGCCAGTGGCAACGCTCAATATAGGCGGTACGCCAAATGCAATGAAAGCGGATGAGCTGAACAATTCGCTTGATACTTTCATTAGGCAAGCTATGAGAAAGGAACCCCTACAAAGAATGGGGGAAGGTCCTGCTCAATGGATGCAGTGGCTTCATTCTATGGATCAGTCAGATATTTCTGGATGGTCTATATCGAATCCTTCAAACCTTCAGATGCAAAAGTGTGAGAAATGTTCCAGGGAGTTTTGCTCACCTATTAATTACAGAAGACATATACGTCTGCACCGCAGATCCTTAAATTCTGATAAGGAATCTCGCAAATACAGGGATTTGTTGGGAGCATTTTGGGACAAGCTCTCAGTGGATGAGGTTAAGGAAGTTGTGTCATTGCAAGATATTTCCCTAAAGGAAATTGCTGGATCTTCACTTGTTCATGCCTTGGCAACAGCTTTGGGAAAACCAGCCCTTTCGTCTCTTCCTCATGTTTATATAAAGGCTGGTTCAAAGTTGTTGGAAGTTATCCAAGCTAGACCTTCCAGGCTTCCAGTGACATCAGAGGAATTATTTAGCATCCTTGATGATGCTAGTGAGAGAACATTCTTATGCGCTGGCACAGCTGAGTCGGTGGAAAAATATGTTTTTGATGGGGAAGCTGACAAAATTGGTTTTGATTCAAGGAATCTGGTTGCTTGCACTAGCTTCCTTTTTGAACAGAAGCTGGTTAAAGCATGGGTTGCTGACAAAAATGCTGAAGCCTTGAGATGCCAAAAGTTGCTTTTTGAGGAGGAAGAAGCTGCTAAAAAAAAGCAAGCAGAGCTATTAGAGAGGAAGAAAGTGAAAAAGCTTCGACAGAAGGAACAGAAAGCAAGGGAGCAATCAAATGAGGAAAAAGGAAATCTGGAGGTACCAGCTGATTGTTTTCAAGTTCCATTAGCAGAAGTACATAGCGTTCCAGGACCGTCTGACTCCAATTCAGATATTCCTGATGTATCTCTGGACGTCTCCACCTGTCTTAAACTGGTTCAATTCCCCAGCAATGAGGATATGAACATTGAATCCAAATGTGATTTCTCTCACCAACATCTGGATTCGGTCAGAGTTCAGAATGTTGAACCCGAACCAGTGACTGCCAATGTTCAACGGCTTTCTGCCAATGCTGAATGCAAAGTTGGGCTATTAGAGAGGAAAAAAGTGAAAAAGCTTTCAACAGAAGGAACAGAAAGCAAGGGAGCAATCAAACGAGGAAAAAGAAAATCTGGAGATATTCCTGATGTATCTCTGAACGTCTCCACCTGTCTTAAGCTGGTTCAGTTCTCCTGCAATGAAGATATGAGCATTGAATCCCAATGTGATTTCTCTCTCCAACACCTGGATTCGGTCAAAGTTCAGAATGTTGAATCCCAACCAGTGTCTACCGATAGTCGATGGCTTTCTGCCAATGCTGAGTGGCAAGCTCCAAAATCGCAAAGGACAGTTCCTCTGTTAATAGTAGTAAGATATGGACAAGAAAAGTTAAGAGTGGAAAGTGATGATGCTTCCATACTGGAGTTGCGGAAAGAGGCAGTAGATCAGAAGCAGAGGAACTCTGAAGTGATGATTGGTTCTTTATCTATTCCAGTGAAAGATTGCAGCACTGACCAACAGGGTAACTGCCGTGTCGAAGCAAGAGATGAGTTTGGAAGCACAGAGCCTGCCATGCCTAAAAAGTGCAATATTGTTGGAAAGCCAGCTAAGCATAATGCTTTTCAGATTGGATCAGACAGAGCAGCTGCCAAGCTTTGGAGGCCTGTGAGGCATGAAGTTGGAAGACAAGATCCTGAAGAGGGTGTAATGTCTTTGCAGTTTGATGATCCGACATCATTAAATGAAAATCCTTTGCAGTCATGTCCCATGGACAGCTCTGGCAGTTCTAAGAGTTGTCAGCTTCCTGATGGAAGTGCACATCAAGATTGGGGATTTTTAGTTAGCACGGCAAAAGCTTTTCTTGCTCAGAATTCAGAAACAACTCCAGCGTCAGATTCTGGGGTACATTGTGCTGTTCCCAGAGCTGCTGACGATCAGCTGGCAAAAGATGGAGTTGTTAATTCATCTTCAAGTAGAAAAAATAAGGTCAAGTTTAGGCCAAAGGCTGAAAAGGATATTAAGACAAAGTACATTCCCAAGCAAAAAACCCATCATTTAGGAAGTAAAGGGATTCAAGTCCGTGAAGCTCTCACGGTCCATGGTGACCCCTTCGTGAACTTGCCCCATGTCGAGACGGGGCTTTGCCAAGGATGTCCCGATACTAGAAGATCTATGACTGGATATGCTGTGAAGTTTGGGGATTCTTTGGTGTCATGGAAATTCAAGAAACAACAAATTATCTCAAGGAGCTCAGTAGAAGATGAGTACAGGAGCATGGCGTGTGCTATAGTAGAAGTGACTTGA
Protein Sequence:
- >Sme2.5_04747.1_g00001.1|Solanum_melongena|C2H2|Sme2.5_04747.1_g00001.1
MDVIVNKSRLEIMPVDTTRTVSNGTIFEKDLKNSQGASDKLSIPVSDPGHCIFISSYRSKALHLHFQLLIQGIAILFPVADPGHCIADKAILFLVVDPGHYIFVSGCRSRAIASRAPSYFQLHPKRHIDSLFITPKRRIHVKYGAIMPNFWVVTFTNTEKEGEKTFANAWPTPTKEGKGDRDIKLGKWAHSENHRDFGYCRRFRVEEASYEKGTPTKNGGRSCSMDAVASFYGSVRYPLENPIQARYLPTKKLSCHLLILCCNSLLALMPVATLNIGGTPNAMKADELNNSLDTFIRQAMRKEPLQRMGEGPAQWMQWLHSMDQSDISGWSISNPSNLQMQKCEKCSREFCSPINYRRHIRLHRRSLNSDKESRKYRDLLGAFWDKLSVDEVKEVVSLQDISLKEIAGSSLVHALATALGKPALSSLPHVYIKAGSKLLEVIQARPSRLPVTSEELFSILDDASERTFLCAGTAESVEKYVFDGEADKIGFDSRNLVACTSFLFEQKLVKAWVADKNAEALRCQKLLFEEEEAAKKKQAELLERKKVKKLRQKEQKAREQSNEEKGNLEVPADCFQVPLAEVHSVPGPSDSNSDIPDVSLDVSTCLKLVQFPSNEDMNIESKCDFSHQHLDSVRVQNVEPEPVTANVQRLSANAECKVGLLERKKVKKLSTEGTESKGAIKRGKRKSGDIPDVSLNVSTCLKLVQFSCNEDMSIESQCDFSLQHLDSVKVQNVESQPVSTDSRWLSANAEWQAPKSQRTVPLLIVVRYGQEKLRVESDDASILELRKEAVDQKQRNSEVMIGSLSIPVKDCSTDQQGNCRVEARDEFGSTEPAMPKKCNIVGKPAKHNAFQIGSDRAAAKLWRPVRHEVGRQDPEEGVMSLQFDDPTSLNENPLQSCPMDSSGSSKSCQLPDGSAHQDWGFLVSTAKAFLAQNSETTPASDSGVHCAVPRAADDQLAKDGVVNSSSSRKNKVKFRPKAEKDIKTKYIPKQKTHHLGSKGIQVREALTVHGDPFVNLPHVETGLCQGCPDTRRSMTGYAVKFGDSLVSWKFKKQQIISRSSVEDEYRSMACAIVEVT