Information report for Sme2.5_03593.1_g00002.1
Gene Details
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Functional Annotation
- Refseq: XP_006338884.1 — PREDICTED: probable lysine-specific demethylase ELF6 isoform X1
- TrEMBL: A0A0V0IZG6 — A0A0V0IZG6_SOLCH; Putative lysine-specific demethylase ELF6-like
- STRING: Solyc04g028560.2.1 — (Solanum lycopersicum)
- GO:0045814 — Biological Process — negative regulation of gene expression, epigenetic
- GO:0048579 — Biological Process — negative regulation of long-day photoperiodism, flowering
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0032452 — Molecular Function — histone demethylase activity
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Sme2.5_03593.1_g00002.1|Solanum_melongena|C2H2|Sme2.5_03593.1_g00002.1
ATGTGGGAAGCTGAATCCAAGATGCACATAAACAGTTACAACACCATATGGATGGGGAGTATGGAGAACAATCAGAGCATTCTCGAAGAAAATTTGATTCTCAAAGCGGGGAACGACAACAGTTTCAAATTTTGGAGATATGGTTGGATTGATCAAACCACTTTGAGTGAATCATTTCCAGACCTCTTTTCTATTTGCACCAATCCTAATGCCATGGTCAGTGATTGTTGGTCTATACAAGGATGGAACTTATTGGGGATCCAGAATTGCTCAATATGGAGAGGTTCAATTCCTACAAAAAGTGCAATGTTTCACCTGTTTTGGAAGTGTTTGGGAAGCGAGACGAGATGGTTTGGGCATGTGCAAATGAGGAGTGTTGATGCTCCTTTTAGGAGGCGCAAGAGGTTGGATTCAGTGGTTACACAGAGGGGTAGAGATAGACCAAAAAGATATTGGGATGAGGTAATTAGACAGGATATGCCACAACTTCATATCACTGAGAACATAACTTTAGATAAAAAGGAATGGAGGTCACATAATATGATAGAAGTTGACAGAATTGAAAGAAATGGAGTGCATTCCCTTAATCATGATGAAGTGTCTTTGACTGCCCCGCCAAGCGAGTCTTCAGTTTCTCCGCACGAGGGTCAAACATTGCAGGCTTATCGTCTTTCACTCACAGACAATGCAGCCCTGACTTCAAAAGTGGACCTTGGGAAGGAATGTGATGTCTTTAGAAGACCACGGATATTTTGCCTTGAGCACGCGATTCAGACTGAAGAACTGCTGCATACTAAAGGTGGAGCAAATGTTCTTGTGATCTGTCATTCAGACTTCCAAAAAATAAGAGGACATGCTGCCGTTGTTGCAGAGGAAGTTGGCATGGCGTTCAAATGTAATGAGATTCCACTGGCTATTGCATCTCAAGGACATCTTTCGTTGATTGATCTTGCAATCGGGGATGAAGAACAAGACAAATGTGCAGAAGATTGGACATTGAAATTACATATTAATATAAGGCACTGTGTGAAGGTGCAGAGGAACTGTCCACTTACTAAATTAAAACATGCATTGATTTTGGGTGGATTATTCTCTGATACAATTCGCAGTTCAGATTCCTTGAGTCTTCTCAACTGGCAGTCCAGAAAAATGCGCTCAAAGAGAAAGTTGAACAATTCAACTGAAAGTACACCATTTGCAAATGTTCAAAAAGCTAATGTAGTTTCAGGGTCTACAGTGGACGTGCAGAATGCTAGAAAGGGGAACATAACAATCCAGTATTCCAGGAAAAAATACAAGCCTAAGGCTTGTAGTTCTGCTGAGGTCACTAGGGTTTTCATGGATCCTTTTAATGTTTCAAAAGAAGTTTCACCAGATGCAAAAATATTGGAAAGCACTCTCCTCAGGGATGAAAATGCAGGCACCGCTTCTTTAGCAGAAAGATCCATTTCTGCTTCTGATAGGAAACCCCGATTGCGACATGAAGATGAGATGCTTTTACTAAACAGAGATCAAAATGGGAATCTCCTTGCACCACAAGAAGCAGATTTACTTGTGACCACATCTTTAATGGTGGAACTCGATGAAGCCCAGGCTGAAATTTGCACTACTGAGAAGTTTTCCTTGGAGGATAAAACTTGTGATACAAATTCAAATAGTTTTCATACAGAGAATACGTCAATGGCTGCAGAGACTAATGGAGAAATAGAGACAACACATGTTCATACTACAGCATGTACATTCATATATGTCGTTCAAAGAACTGCAGATGATGAAAATTTGGTGGAGAATCGGGATATCACAGAATCTGTCACCAGAGATAAGTCTGCTCATCCGATGGAAACAGATTTTGACAGAGATCATCATAATGAGGATGATAAAGTTATTATGACCAGATCTCCCATGCGTGTCAACTCTTCAGGTTCTTGCACTGATGGTCCTTCAAGAAGTTGTGGTAAGAAGATTGAGGATCAAGTCTCCCAACAATTTGGCTCAGGTAGCCAGTCATCTGATAGTGACATGTTGCACAAATCTGTGGAGCAAGAAGTCCAAATTGATAATTCAGTTAAAAACATAGCTGTTTCTGATCATGTCACACTCATTGAAGAAGCTTCCGCCTCAGCAGTAAGTCTCAAAATGACAAGAGAGACATCTAATACGAAGCACTCGCGGAGTGGTGATGACATCTCTGAGCAGCATAAGAAAGAGTCAGACGATGATACTACTTCTGCAATAGTGTTGAGGCCGACTGGAAAAAATGGTGGCAAGAGGAGGCGTGAGCTAGACCTCCTAACTGGTGATGGATATAGTGTTAGTGGCTTTGTTAAAAGTCCATGTGAAGGCTTAAGGCCACGGGCTAGGAAAAATGTACCTGGGAGCAGAGTTGATACTAAGGAACTTGTTGAGAAGAAACCCATGGGAAATAAGGTGAAAAGGTCTTTACATAGTTCCGTCATTCCCAAGAATAAGAAAGAAGAGAGGAAGGAAACTCATAGGTGTAACTTGGAAGGGTGCTGTATGAGTTTCCAGACAAAGGAAGAGCTGCAACTGCACAAACATAACCGCTGCCCCGTTGAAGGGTGTGAGAAGAAATTTACCTCCCACAAATATGCTCTGGTTCATCAACGTGTTCATGAAAATGATAGGCCCCTCAAATGTCCATGGAAGGGGTGCACCATGACATTCAAGTGGGCGTGGGCGAGAACTGAACATTTGCGTGTACATACTGGTGAGCGACCGTACAAGTGCAAGGTTGAGGATTGTGGACTCACTTTTAGGTTTGTATCAGATTATAGTCGGCATAGACGGAAAACTGGTCATTATGTAGATGCTGTGAATTGA
Protein Sequence:
- >Sme2.5_03593.1_g00002.1|Solanum_melongena|C2H2|Sme2.5_03593.1_g00002.1
MWEAESKMHINSYNTIWMGSMENNQSILEENLILKAGNDNSFKFWRYGWIDQTTLSESFPDLFSICTNPNAMVSDCWSIQGWNLLGIQNCSIWRGSIPTKSAMFHLFWKCLGSETRWFGHVQMRSVDAPFRRRKRLDSVVTQRGRDRPKRYWDEVIRQDMPQLHITENITLDKKEWRSHNMIEVDRIERNGVHSLNHDEVSLTAPPSESSVSPHEGQTLQAYRLSLTDNAALTSKVDLGKECDVFRRPRIFCLEHAIQTEELLHTKGGANVLVICHSDFQKIRGHAAVVAEEVGMAFKCNEIPLAIASQGHLSLIDLAIGDEEQDKCAEDWTLKLHINIRHCVKVQRNCPLTKLKHALILGGLFSDTIRSSDSLSLLNWQSRKMRSKRKLNNSTESTPFANVQKANVVSGSTVDVQNARKGNITIQYSRKKYKPKACSSAEVTRVFMDPFNVSKEVSPDAKILESTLLRDENAGTASLAERSISASDRKPRLRHEDEMLLLNRDQNGNLLAPQEADLLVTTSLMVELDEAQAEICTTEKFSLEDKTCDTNSNSFHTENTSMAAETNGEIETTHVHTTACTFIYVVQRTADDENLVENRDITESVTRDKSAHPMETDFDRDHHNEDDKVIMTRSPMRVNSSGSCTDGPSRSCGKKIEDQVSQQFGSGSQSSDSDMLHKSVEQEVQIDNSVKNIAVSDHVTLIEEASASAVSLKMTRETSNTKHSRSGDDISEQHKKESDDDTTSAIVLRPTGKNGGKRRRELDLLTGDGYSVSGFVKSPCEGLRPRARKNVPGSRVDTKELVEKKPMGNKVKRSLHSSVIPKNKKEERKETHRCNLEGCCMSFQTKEELQLHKHNRCPVEGCEKKFTSHKYALVHQRVHENDRPLKCPWKGCTMTFKWAWARTEHLRVHTGERPYKCKVEDCGLTFRFVSDYSRHRRKTGHYVDAVN