Information report for Sevir.8G184000.1.p
Gene Details
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Functional Annotation
- Refseq: XP_004980687.1 — uncharacterized protein LOC101765117
- TrEMBL: A0A368S929 — A0A368S929_SETIT; Uncharacterized protein
- STRING: Si027751m — (Setaria italica)
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brassica napus: GSBRNA2T00029687001
- Brassica oleracea: XP_013615265.1, XP_013630538.1
- Panicum virgatum: Pavir.8NG275300.1.p, Pavir.8NG275300.2.p
- Salvia miltiorrhiza: SMil_00015437-RA_Salv
- Setaria italica: Seita.8G174800.1.p
Sequences
CDS Sequence:
- >Sevir.8G184000.1.p|Setaria_viridis|C2H2|Sevir.8G184000.1.p
ATGGCCGACGCGGACGCGGCCGCGGCCGCAGCAGCCGAGGCCGTCCGCGAGGTGGCCACGGAGATCCTGCTCATCGACCACGACGGCCAAATGGACGCGGCGCTCGCCCGCGCCCGCGCCCTCATGCTCGCGAACCAGGGCTCGGCGGTCGCGCACCGCCTCCTGGGCGAGCTCCACTACTCCGCCGCCGTGCGCGCGGCCTGCGGCGAGGGCACCCCGGGGGAACGCAAGGCCGCGGCGGCGTCGCACCTCCGCGTCGCCCGCGACGCGCTCGCCGAGGCGCGCCGCCTCGCCCCGGACTGCGTCGACGTCGCCGCCGCGCTCGGCGACGCGCTCGCGGCGTCCCGGATGTACGCCGAGGCCGAGGCCGAGTTCCGCCGCGCGCAGACCATCCACCGCCCCTCCGACCCAGCCCTCCACAACGCCGCCTACGGCATGCAGCTCGGCGTGGCGGAGGGCCGCAAGCGCGCCAAGCTCGTCGCCGAGACCTTCCCCAACCTGGCGCGCGCGCAGCACCTCCAGGCGTACATGGACCTGGAGTTCGTGCGCAGCCTCGACGCCGCCATCGACAAGCGCCCGTTCCTGCGCCGCACCCTGGCCATGGCTGAGCGCGCGGCGCGGGCGTTCCCCAGATCGCCGGTGATCGCCTCCTTCCACGCGAGGCTCCTCTTCGTCCTGGGCGAGTACGACGCCGCGGAGCGCGAGTGCCGCCGCGCGCTCGACATGAAGGAGCCCGATGACCCGCAGATGGACTGCATCCCGACCTGGTCCATCGGCGGGGAGAACCGCGGCGCGAGGCTGGTCTCGCTGGCCTGCGAGTTCCACGAGCTGCTGAACAAGATCCTGGTGGCGGCCAGCGATTACTGGGACTCCATGAATGGTGAGAGCCAGCGCGACGGCTTCCTCCGGTTGAGGTTCGATGTGCTGCAGGACGAGTACAGGAAGGTTGATCGGTCGTGTGCGTTCGCCATGTCCGACGTGCGGAGCTTTGTCGAGGAACACAAGGCTTGGAGGTTCTGGGATTGCCCCATTTGTGATCGCAAGAAGTTTGTGGAATCTGGTCTGCTTCTGTCACACATGTGCAACAAGCACCCAAGGGCAGTCCTGCCACGGCTGCAATCTCTTTTGGATCAAACAACACTCAGTGACGAAGCACTAGAGAGTGATGATTCTCTGGATGGGGTGACTTTCTGTGAAGATTCAGCCGAGCAAGACATGATCTGCTTCAGCAAGAGCAGTGATGTATTCAAATGGTTGTTCTACGCACCTTCAAGTGGAGTAGGAGCAAAGCCATTTCCTGAATTACTAGAACAGAAGCGTGAGAAAGGATGTATGCTTCTTGAGAGCATTAAGGACAAAATGAAGACTCTGCCTGCAGATAAATCTAGCACTGAGTTTTCAGAGGCTCTTCCTAGGATCCGGGAGTCGTGGAACGAATTTCTCAAAGCTTCTGTGTTGGATTATCGAGGAGCCATTCTGACACTTGCAAGATCATTCCTATGGAGAGAATTAAAGAAATGCATGACTGAAGATCCTGAATTAGCTGCTAAGAAGATTAGTGCTACTGATATTGATGCCGTATTCACTAAAGAAGTTGAGCCATCCCGTGCAGAGGAGGATCGCGAAACAGGGGACAATAAACAGCCTTCCCAAGCAGATGGGGCTCTAATGGTCAGTGGAGATTATGAAGAAAGTGATGTTGATGTTAAAGATGAGAGTTGTGAGAAGCTGGAAAACAATATGGAATCATCAGATCCGGCAATTAGTGTGGCAGAAGGCAATAATGGCCTATATGCAAAATTGGATATATTGGACATTGATGCAAAGATCAGTGAGAATAATCAAGAAAGTGCGGTTCATGTTGAAAAGGCTGAGATCCCAGCAAACAATACAAAATCGGCAGACCTGGCAACCAGTGTGGCACAAAGCGGGAACGACCTAGATGCAACATTGGATAAGTTGGATATTGATCCAAAGATCAATGAGAATAATCAAGAAAGTGAGGTTCAGGTTGAAGGTGAGAGTTCTGTCGCCATGGTGACCAACACAGAATTGTCAGATCCAGCAACCAACATGGCGGAAAGCAGGAATGACCTTGACGCGAAATCCAATTTCTGA
Protein Sequence:
- >Sevir.8G184000.1.p|Setaria_viridis|C2H2|Sevir.8G184000.1.p
MADADAAAAAAAEAVREVATEILLIDHDGQMDAALARARALMLANQGSAVAHRLLGELHYSAAVRAACGEGTPGERKAAAASHLRVARDALAEARRLAPDCVDVAAALGDALAASRMYAEAEAEFRRAQTIHRPSDPALHNAAYGMQLGVAEGRKRAKLVAETFPNLARAQHLQAYMDLEFVRSLDAAIDKRPFLRRTLAMAERAARAFPRSPVIASFHARLLFVLGEYDAAERECRRALDMKEPDDPQMDCIPTWSIGGENRGARLVSLACEFHELLNKILVAASDYWDSMNGESQRDGFLRLRFDVLQDEYRKVDRSCAFAMSDVRSFVEEHKAWRFWDCPICDRKKFVESGLLLSHMCNKHPRAVLPRLQSLLDQTTLSDEALESDDSLDGVTFCEDSAEQDMICFSKSSDVFKWLFYAPSSGVGAKPFPELLEQKREKGCMLLESIKDKMKTLPADKSSTEFSEALPRIRESWNEFLKASVLDYRGAILTLARSFLWRELKKCMTEDPELAAKKISATDIDAVFTKEVEPSRAEEDRETGDNKQPSQADGALMVSGDYEESDVDVKDESCEKLENNMESSDPAISVAEGNNGLYAKLDILDIDAKISENNQESAVHVEKAEIPANNTKSADLATSVAQSGNDLDATLDKLDIDPKINENNQESEVQVEGESSVAMVTNTELSDPATNMAESRNDLDAKSNF*