Information report for Seita.2G368500.1.p
Gene Details
|
|
Functional Annotation
- Refseq: XP_022680094.1 — protein indeterminate-domain 1
- TrEMBL: A0A368Q6V3 — A0A368Q6V3_SETIT; Uncharacterized protein
- STRING: Si028906m — (Setaria italica)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Seita.2G368500.1.p|Setaria_italica|C2H2|Seita.2G368500.1.p
ATGGCGTGGCCGCGTGCGCCCAAGCCCCGCTTCCGAAGCGAGCCAGGCCAGGCCAAGCAGAAAGGCAGGGGCAGCCGCAGCCATCCGGACGCCGAGGTGATCGCGCTCTCGCCGGGGACGCTGCTGGCGACCAACCGCTTCGTCTGCGAGGTGTGCGGGAAGGGCTTCCAGCGGGACCAGAACCTGCAGCTGCACCGGAGGGGGCACAACCTGCCCTGGCGCCTGCGGCAGCGCGGGCCCGGCGCGGCGCCGCCGCGCCGGCGGGTGTACGTGTGCCCCGAGCCTGGGTGCGTGCACCACTCCCCGGCGCGCGCGCTCGGGGACCTCACCGGGATCAAGAAGCACTTCTGCCGAAAGCACGGGGAGAAGCGCTGGGCGTGCCCGCGCTGCGGCAAGCGCTACGCCGTCCAGGCCGACCTCAAGGCGCACGCCAAGACTTGCGGCACCCGCGAGTACCGCTGCGACTGCGGCACGCTCTTCACCAGACGGGACAGCTTCGTGACGCACCGCGCCTTCTGTGGCGCACTTGTGGAGGAGACAGGCAGGGTGCTGGCGCCGCCGGCGCCGCCATCGCCTCGGCCGCCTGATTTGGAGGCCGAGGAGAATGTGGACAAGGACAAGGGGCAGGAGGAAGAGGAGACTGAGGATTCTGCCGGGGCCGAGGTGGAGCAGCCTAAGCCTGTGGAGGCACCGGCCCCGGAAGAGCCGCAGCGCATCCCATCTCCACCGCCATTGCCACAGGAGCCACCGCGCCGTCCGTCTCCACCACCATTGCCACAGGAGCCACCGCGCCGTCCGTCTCCACCTCCATTGCCAAAGGAGCCGCCGCGCCGTCCGTCCCCACCTCCATTGCCCAAGGAACCACAGCTCTTTCCCTCGCCACTTCGATTTCCACTGGAGCAGCGGCCAGTTGTGGCGGTGGTGCCAAATGTGGATGAGCCAGAGGTGGTTGCTGAGACAACTGTGACAGCCAAATTGGAGGATGAAGCTGATACATGCTTCAAGGAAGCTGATCAATACAAGGAAGCTGAACTTGAGGTCTCCAATCTGCTGGACAAGGACACTCCAATGCTTCCTTGCTTCCTCCCATCACCCTCAGAGGCCATTGGTACCGATGGGAGCAGCACCACCTGTGGTGCCGGCGGCAGTGTTTCCAATTCCATCGCGCCATCTACAACAACCAACACTTTCGCCGGTCTGTTCGCGTCAGCCACAACAAGCACCACTTCCCAGAGCAGGTCTCTACGTGATCTCATCGGTGTCGATCCCACCTTCCTCTGCCTTGCGATTGGTGCGCCCTCCTCTCTGTTCCCACAGACAAGCGCAAGCAATCCAGGCACCTTCGCTCCACCTCCAGCACCGCACATGTCCGCGACCGCGCTCCTGCAGAAGGCTGCTGAAGTTGGAGCTTCGCAATCAAGCTCATCGTTCCTGAAAGAGTTTGGGCTTGCCTCTTCCTCCTCGTCATCGCCTCCATCGAAGCAGCTACCTCAAGGAAGGTTTGCTGAAAACAGCATGCAACCATGGCACCACCGGAGTAATCAACAAATGGAGCGTCATCGGAATCATCAGCAGAGGGAGATGGAGTCCAGTTCGCAACCGTGGCACCACCGGAGTCATCAGCAAATGGAGATGGAGCGTCATCGGAATCGTCAGCAGATGGAGATGGAGTCCAGTTCGCAGCCGTGGCACCACCGGAGTACGCAGCAAATGGAGATGGAGCGCCACCGGAATCATCAACAAAGGGAGATGGAGTCGAGTTCGCAGCGGTGGCACCACCACCGGAGCGACCAGCAAATGGACATGGAGCGCCACCGGAGTCATCAGCAAATGGAGATGGAGTCAAGCACGCAACGGTGGCCGCACAACAGGAGCAGTCAGCAAATGGAGGTGATGGAGCGGCACCACCGGACTAGTCAGCAAATGGAGAGGGAGTCCAGGGCAATGCTATCCGGGGGCCTTGGCCTTGGCCTCGCATACGAAAGTGGAAATGCAGGGTTGCCGGACCTGATGATGGGACCATCACCACTGTTCGGTCCCAAGCCTGCTACGCTGGACTTCCTTGGTCTTGGCATCGGAGGGACCATGGGCGGCTCCACGACCAACGGTGGCCTCCCGGCATTGATGGTTGGAGGAGAGCTGGACGTGGGGTCTTCGGCGCAGGTGCCGGCGCCATGGGAGGACGCCAAGAGGAAGACCAACGGCCGCACGATCCTGTGA
Protein Sequence:
- >Seita.2G368500.1.p|Setaria_italica|C2H2|Seita.2G368500.1.p
MAWPRAPKPRFRSEPGQAKQKGRGSRSHPDAEVIALSPGTLLATNRFVCEVCGKGFQRDQNLQLHRRGHNLPWRLRQRGPGAAPPRRRVYVCPEPGCVHHSPARALGDLTGIKKHFCRKHGEKRWACPRCGKRYAVQADLKAHAKTCGTREYRCDCGTLFTRRDSFVTHRAFCGALVEETGRVLAPPAPPSPRPPDLEAEENVDKDKGQEEEETEDSAGAEVEQPKPVEAPAPEEPQRIPSPPPLPQEPPRRPSPPPLPQEPPRRPSPPPLPKEPPRRPSPPPLPKEPQLFPSPLRFPLEQRPVVAVVPNVDEPEVVAETTVTAKLEDEADTCFKEADQYKEAELEVSNLLDKDTPMLPCFLPSPSEAIGTDGSSTTCGAGGSVSNSIAPSTTTNTFAGLFASATTSTTSQSRSLRDLIGVDPTFLCLAIGAPSSLFPQTSASNPGTFAPPPAPHMSATALLQKAAEVGASQSSSSFLKEFGLASSSSSSPPSKQLPQGRFAENSMQPWHHRSNQQMERHRNHQQREMESSSQPWHHRSHQQMEMERHRNRQQMEMESSSQPWHHRSTQQMEMERHRNHQQREMESSSQRWHHHRSDQQMDMERHRSHQQMEMESSTQRWPHNRSSQQMEVMERHHRTSQQMERESRAMLSGGLGLGLAYESGNAGLPDLMMGPSPLFGPKPATLDFLGLGIGGTMGGSTTNGGLPALMVGGELDVGSSAQVPAPWEDAKRKTNGRTIL*