Information report for SapurV1A.1951s0050.2.p
Gene Details
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Functional Annotation
- Refseq: XP_011003861.1 — PREDICTED: dnaJ homolog subfamily C member 21
- Swissprot: Q9C911 — JJJ1_ARATH; DNAJ protein JJJ1 homolog
- TrEMBL: A0A2C9VP09 — A0A2C9VP09_MANES; Uncharacterized protein
- STRING: cassava4.1_003940m — (Manihot esculenta)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brassica napus: GSBRNA2T00074731001
- Brassica oleracea: XP_013620746.1, XP_013620745.1
- Citrus sinensis: orange1.1g007551m
- Cucumis melo: MELO3C017222P1
- Fragaria vesca: mrna25809.1-v1.0-hybrid
- Manihot esculenta: Manes.06G085000.1.p
- Prunus mume: XP_008240022.1
- Prunus persica: Prupe.5G204600.3.p, Prupe.5G204600.2.p, Prupe.5G204600.1.p
Sequences
CDS Sequence:
- >SapurV1A.1951s0050.2.p|Salix_purpurea|C2H2|SapurV1A.1951s0050.2.p
ATGGCATCAAATCAGCTGCGATGCCATTACGAGGTGCTTGGTCTATCACGCGACTCGTCGCCTGAAGAAATCCGTTCGGCATACAAAAAGCTTGCTCTCCGGCGGCATCCTGACAAGCTTGTCCAATCTGGCTTAAGCCAAGCCGAAGCCACTGCTCAATTTCAAGAGCTTGTTCAGGCTTACGAGGTCCTCTCCGACCCCAAAGAACGAGCTTGGTACGATTCTCATCGTTCTCAAATCCTCTTCTCCGATCCCAATTCTGGTAACTCGGTCCCTGACTCAGTCATTCCTAATTTGTTCTCTTTCTTCTCCAACACTGTTTACTCGGGTTATACTGATTCTGGAAGAGGTTTTTATAAGGTTTATTCTGATGTTTTTGAAAAGATTTATTCGAACGAGGTTAATTTTTGTAGGAAGTTAGGGTTAGGTTTAGATAGTGTTAGGGATGCTCCGTTAATTGGGAATTTGCAGTGTGATTATGCGCAGGTTTCGGCTTTTTATAATTATTGGTTGGGGTTTAGCACTGTTATGGATTTTTGTTGGGTTGATAAGTATGATGTGATGGCGGGGCAGAATAGGAAATCGAGGAGGGTTATGGAGGAGGAGAATAAGAAGTTGAGGAAGAAGGCGAGGCGGGAGTATAATGAGACAGTGAGGGGGTTGGGGGAGTTTGTTAAGAAGAGGGATAAGAGGGTGATTGATATGCTGGTTAAAAAGAATGCTGAGATGGAGAGGAAGAAGGAGGAGGAGAAGGAGAGGAAGAAGAAGTTGGAGAGGGAGAGGATGGAGAGGTTGAGAGCATATGAGGAACCAGAGTGGGCTAGAGTGAATGAAGAGGAGGTTGATGGAATGGAGGGTTTTGAGGAAGAGGAGGATAAGGGGAAGAAGGGGAATGGAAGGAAGGAGTTGTATTGTGTTGTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAATGGAAGAATCATGAACAGTCAAAGAAGCATAAGGAGAAGGTTGCTGAGTTGAGGGAGTCGTTTCAGGATGAAGATGATGAGAGGGAAGATATCGAGGAGGATGATCTGGAGAAGAATGAGGATGTGGAGGAAATAGAGGAGAGGTTTAAAGAGGATTTTATTATACAGTGGGAAGGGAATGGGGCTGAGGTTCTTGATGCTTATGTGAATGGGATTGACAAGAATAATGGGAATGTAGAGGATGAGGAGGGGGAGGAAATGAGTGTACTTGAAGCAATGGTGTCGGGGCACAAAAGTAGGAAAAGTAGGGGTTCAAGGCATATGAATGAGGAGTTTCCACAGGAAGTTGAGGATGCAAAAGAGGAGGTTGAGGTTATGAAATATAATAACCGGAAGACGAGGAGAAGAGGCAAGAAAGTGAGGGGTTGGAACAATGGTGGTGAAGGTGTTACAAGTGACATTGATGAAAGCATGAGTGCTAATGAAGAAACTAATGGATGTGATGATGAGCAAAATGAGGATGCAAAAGAGGAGGTTGAGGTTATGAAATATAATAACCAGAAGACTAGGAGAAGAGGCAAGAAAGTGAGGGGTTGGAACAATGGTGGTGAAGGTGTTACAAGTGAAATTGATGAAAGCATGAATGCTAATGAAGAAACTAATGGATGTGATGATGAGCAAAACGAGGAGCCTGCTTCTAATTCTTTCGTGGAGGATAAGAATGACAGTAAAATTGATGATCATTTAGGGAAAACTGGCAAGAAATCAAACCAATCTACCAAGAAGAAAGGGGCTGCAACGAAGGAAACAAATGTGAAATCAAAGAACTCATCTAAAGGCAAGAAAGGAAAGGCAATTTCTAAGGATTCTGGCAATGCATGCGATACATGTGGAGTTGAATTTGAATCAAGGAATAAATTACATAATCATTTGGGTGATACTGGTCATGCTACACTGAAATCCCACTGA
Protein Sequence:
- >SapurV1A.1951s0050.2.p|Salix_purpurea|C2H2|SapurV1A.1951s0050.2.p
MASNQLRCHYEVLGLSRDSSPEEIRSAYKKLALRRHPDKLVQSGLSQAEATAQFQELVQAYEVLSDPKERAWYDSHRSQILFSDPNSGNSVPDSVIPNLFSFFSNTVYSGYTDSGRGFYKVYSDVFEKIYSNEVNFCRKLGLGLDSVRDAPLIGNLQCDYAQVSAFYNYWLGFSTVMDFCWVDKYDVMAGQNRKSRRVMEEENKKLRKKARREYNETVRGLGEFVKKRDKRVIDMLVKKNAEMERKKEEEKERKKKLERERMERLRAYEEPEWARVNEEEVDGMEGFEEEEDKGKKGNGRKELYCVVCGKKFKSEKQWKNHEQSKKHKEKVAELRESFQDEDDEREDIEEDDLEKNEDVEEIEERFKEDFIIQWEGNGAEVLDAYVNGIDKNNGNVEDEEGEEMSVLEAMVSGHKSRKSRGSRHMNEEFPQEVEDAKEEVEVMKYNNRKTRRRGKKVRGWNNGGEGVTSDIDESMSANEETNGCDDEQNEDAKEEVEVMKYNNQKTRRRGKKVRGWNNGGEGVTSEIDESMNANEETNGCDDEQNEEPASNSFVEDKNDSKIDDHLGKTGKKSNQSTKKKGAATKETNVKSKNSSKGKKGKAISKDSGNACDTCGVEFESRNKLHNHLGDTGHATLKSH*