Information report for RrC1660_p4
Gene Details
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Functional Annotation
- Refseq: XP_018486937.1 — PREDICTED: uncharacterized protein LOC108857448 isoform X1
- TrEMBL: A0A0D3DDI9 — A0A0D3DDI9_BRAOL; Uncharacterized protein
- STRING: Bo7g098400.1 — (Brassica oleracea)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >RrC1660_p4|Raphanus_raphanistrum|C2H2|RrC1660_p4
ATGTGCTTCGACTCAATCACCACCCACACGGCGGAGGCAGAGTACGCGACTGCTAAAACGTCGGTTTGGTGGGACATCGAGAACTGCACTGTTCCCAAGGGCTGGGAAGCTCATACCATCTCTCAGAAGCTAAACTCAGCGCTGGTGAACTTGAACTACCGTGGTCCTCTCTCCATCTATGCTTATGGCAACACAGATCTCATCCCCAAACCTGTTCAGCAAGCTCTCTCCTCCTCTGGAATCTCTCTTAACCACGTCCCCTCCGGAAAGAAAGATGCGAGTGATAAGAAGATTCTGGTGGATATGTTATTGTGGGTGTTGGAGAATCCTGCTCCTGCTAACTTGATGCTCATCTCCGGTGATGGAGACTTCTCTTATGCTCTAAACCGTCTGCGGATGAGGAGGTATAACATTCTTCTCGCGCACCCTCTTCAAGCTTCACCTTTCTTGGTTGCTTCTGCGAGGACCTCGTGGATGTGGAAGAGCTTAATTGCAAGTGGTTGTCCATCCGCACGAAGCTGTTGTTGTTGTTGTTCCTCTGGTTCTGAAACATCCAGCCAAGACGTTTCTGTTTCTGTGTCTGAGCATGTTTTGTCCACACAAGCGATGGATTTAGGGTCTGGTGGTACTAGTAAGGCTGCACGAAAGAAACTCAGAAGAATCCTGAGAGAACTAAATCAACAGGAGACAAAAAGTATGGAGACTCAGAAGAAGTTTGGTGAGCCTGAAAACATAGCTGCAGCAGCATCAAGTGGGTGTCATGAGCAGGAGACAGAGATTGAGAATAAGGTAGTTGAAGCAGGAGTTGAGATGGTTGCGCTTTGCGGTTCGCCCAGTGTGGCTCTCGTGGATGCTAAAGACATTGAAGATATTGTTCAAGACAATGAAATGAAGTCTCAGGATGCTCAAGAGTCTATAAAGTGCTTGGAGAAAGAGAACAAAGAATTGATGGAGGCTATTACAACATCTGAAAGTTGTGAAAGAGAGTTCTGGCAGGATTTTAAAGAAAGGCTGGACAAGAATGGTGTAGCTCCTCCTCTCAGTGTACATCATGTTTTCAGTGAACTAAGCCGCGACTTTCACGTGCCTAAAGAAGTGAGGGAGTGTTTTGAAGCAATACTCAAGAAGCTAGAACCTACACAAAATGATATTGAAATCGAGAAGTTGGAGAGCATGCTCAAACAAGGCTTGGAGATAGAATCAGCTGAGCCAGAGAATAATTCACCTGCAGAACCGACTGAGAATCTTGAGGGGGACATGACCAAGAAGATGGAGAAGAAGAGTACAGTGGTTGAAGGCAAATATGAACCATATGTTTGCGGTATTTGCAATGTCGTTTGTGCACATCCTTCCGTGTACGAGTCTCATCTTAAGGGAAGGAAGCATGTTGCTAAGTTTAAGAAGCACACAGAGGCTCTGCTTGATGGTCAACAAATACAACAAGAGGAAATCATTCGAGATAATGGTCTTCCGAGAGATATGACAAAGGAGCTCCAAATCAAGCCTGTAGAGGCACCTGAGAACATGGACTACTTAGATGACCAAAGAGAGGAGCTGGGAGAGAGATGTGGCACCTCTGAGAGGAGTCTTGAAGAATTTTTTCAAACTACTGAAGAAGTAGGAGAGAATGACTACAAACCTCTTCCAAATGCAGAGTGTATCTTCACCGGACTAACTCCTGAGTTTTCTGCCTCTGAAGAATCTAGGGATGGGATTGATGCCATTTTCAAGGAACCAGAAGTCTCACAAGATGCAAACTTAAGCCAGGAGTTTGAGAGTATGCCAAACGGGAACCTGGAAATGAACACAGGCGATCCTGAAAGTACCACTGAGCATCCAGAGGAGTACATGGACATGGGCATGAAGAAGGAGAAGGTGACTAAAGATAAAGCTGAACTTAAAGCATATGTTCTCTTTGATGATAAAAAGATTGTGGAACAGAGTCTTGAAGAGAAAGAACATCCAAGAGACGCGTTGGAAGAGCTACAGTTTGTGCCTAAGGACGCACAAACGAGCGTCAAAGAAGTTACTCAAATCAGTAAAGCACGAGTAGATAATAAAGATAATGAACAGATTCTAAGTGTTGAGTTTGCAGAACCCAAGGAAGCGAGCAGAGAGCGATTTGACTCAATTGTCAAAAGATTAGACCTTTTCATGGAGAAAACGTCAAAGCAGACGCTGGTTGAGTCTGAAAACGCAGCTGAAGGTGTGGAGGAGGTGGTGGGGACAGGGAAGGAGAATGGAGCAGCAGCAGCTCTAGTTAGGGTTTGTGATTGGTGCAATGTGGTATGCAATACCCAAATGGATTTTGATTCACATGTAGCAGGTGAGAAGCATGCTGCCACTTTGAGAAAGCATGTTCCTCTGGTGAAGAATGAAGTTGCCGTGGTGTAG
Protein Sequence:
- >RrC1660_p4|Raphanus_raphanistrum|C2H2|RrC1660_p4
MCFDSITTHTAEAEYATAKTSVWWDIENCTVPKGWEAHTISQKLNSALVNLNYRGPLSIYAYGNTDLIPKPVQQALSSSGISLNHVPSGKKDASDKKILVDMLLWVLENPAPANLMLISGDGDFSYALNRLRMRRYNILLAHPLQASPFLVASARTSWMWKSLIASGCPSARSCCCCCSSGSETSSQDVSVSVSEHVLSTQAMDLGSGGTSKAARKKLRRILRELNQQETKSMETQKKFGEPENIAAAASSGCHEQETEIENKVVEAGVEMVALCGSPSVALVDAKDIEDIVQDNEMKSQDAQESIKCLEKENKELMEAITTSESCEREFWQDFKERLDKNGVAPPLSVHHVFSELSRDFHVPKEVRECFEAILKKLEPTQNDIEIEKLESMLKQGLEIESAEPENNSPAEPTENLEGDMTKKMEKKSTVVEGKYEPYVCGICNVVCAHPSVYESHLKGRKHVAKFKKHTEALLDGQQIQQEEIIRDNGLPRDMTKELQIKPVEAPENMDYLDDQREELGERCGTSERSLEEFFQTTEEVGENDYKPLPNAECIFTGLTPEFSASEESRDGIDAIFKEPEVSQDANLSQEFESMPNGNLEMNTGDPESTTEHPEEYMDMGMKKEKVTKDKAELKAYVLFDDKKIVEQSLEEKEHPRDALEELQFVPKDAQTSVKEVTQISKARVDNKDNEQILSVEFAEPKEASRERFDSIVKRLDLFMEKTSKQTLVESENAAEGVEEVVGTGKENGAAAALVRVCDWCNVVCNTQMDFDSHVAGEKHAATLRKHVPLVKNEVAVV