Information report for Psi000796
Gene Details
Functional Annotation
- Refseq: XP_024365599.1 — protein indeterminate-domain 1-like isoform X1
- Refseq: XP_024365607.1 — protein indeterminate-domain 7-like isoform X2
- TrEMBL: B8LP08 — B8LP08_PICSI; Uncharacterized protein
- STRING: PP1S165_3V6.1 — (Physcomitrella patens)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Prunus mume: XP_008228288.1, XP_008228287.1, XP_008228286.1, XP_008228285.1
- Sesamum indicum: XP_011072643.1
- Vitis vinifera: GSVIVT01016867001
Sequences
CDS Sequence:
- >Psi000796|Picea_sitchensis|C2H2|gnl|UG|Psi#S50072405;PUT-183a-Picea_sitchensis-14609
ATGTTGAATGGTGGATTACCGGCTGCTGCAGCGTCGTCGCAGGCCGTAGGAGGTCCCGGTTCTGGCTCGAGGGCTAATTGGAACCTGGTCGTGAAATTGGAGAATTCTGAGAGGACTACCCCGACCATGACCCAATCCAATGTTACGTCTGCTGCTTCCGGCGAGGGCGCCACCGTTTCTTCTGCTGCTGCCACCGGTGGCGGTGGCGGCAGCGGAGCGGTCCAGCAGTCCTCGGCGCCGCTCAATAATTCATCTGCGCAGCAGCAACCCGGCGTACCGAAGCGGAAGAGAAATCTCCCTGGCATGCCTGACCCAGATGCGGAAGTGATAGCGTTGTCGCCAAAGACCCTAATGGCGACGAACCGTTTCGTGTGCGAAATATGCAACAAGGGATTCCAACGGGACCAGAATCTGCAGCTCCACAGGCGAGGCCATAACTTGCCCTGGAAGCTAAGACAGCGGACGAGCAAGGAGATCCGGAAGCGGGTTTACATCTGCCCGGAGCCGAGCTGCGTGCACCATGATCCTTCCAGGGCGTTGGGCGACCTTACGGGCATCAAGAAACACTTCTGTCGGAAGCATGGCGAGAAGAAATGGAAGTGCGACAAGTGTTCTAAGCGCTATGCGGTTCAGTCCGACTGGAAGGCCCATTCCAAGACCTGCGGCACTAGAGAATATCGTTGCGATTGCGGCACTCTCTTTTCCAGGAGGGATAGTTTTATAACACACCGGGCCTTCTGTGATGCTTTGGCGGAAGAAAGTGCGAGAGTTACAGTGAATAATACTGAACCCGTTGCAACTAGGACGACGACGAATTCTTCGTCCGACGACGGTCCCAATCCGTGCCCGTGTCCCCCCGATTCTCACAAGGTCTCTATTTCTTCAACCGGCGGTGCCGTTGCTCCGCCTCCGCTCTCGGCCGGGTGGGGGGGACAAGCACCGGGCGGGGGCGGCGGCGGGGGCGGTGGAGGAGGAGCAGGACCGAGGTTGTCTTTATGGCTAGGACCAGGTCCCGGCGGTCCAGGTCCTCCGCCTACTCTAGATTCAGCATCGGCATCATCATCGACGCAGTTTAATGTAATGGACGGGACTGGGACATATCCATATCCTTTCTTAATGCGCGCATCTAACAATCCCAGTGAACGTTCCGCCGCCGCGGCGGAGCTCGGTCGTCCTACTGGTGGTGGAGGTGGTGGTGGTGGTAGGGGGTTTATGGCACCAGCTTCGGCATCGAGCCTATTTGCAAGCCTGTTAGCCTCGGGAGGCTTACCGGCGGCTCAAACCCCTACCGGATTCTCTGAACTGATTGGAGCCATGACTAGAGGAGGAAACGGCAGTATTAGTACTAGTACTAGTTCTGCTACCACAGCTGCACCTGCCGTGTTTTCAACAGGAATTCCGGCTATTTTTAGCCACCCACAACCACCACAGGTCCATCACCAGCAGCATAATAACACCGCCACGGCTCAGATGTCCGCCACGGCCCTGTTGCAGAAAGCAGCCCAAATGGGCGCCACGGCCGCCAGCAACAACCCCTCGTTGCTCAGAGGCTTCGGCGGCCTAGCAGGTCACGATAACTCGTGGCCACCTATGATGGCAGCTGCGAATCACAGCTCCGAGCCTTACCCGTTGCTCAGACGTCTCACTGAAGGAATCATGCCAATGCCTATGCCAACGTCAATGCCATCTTCTTCTTCCTCTTCACTGGATCAAGTGACAATGCAAGAACTCATGAACTCACTATCGACGACAGCGTCCCTGGGGAGCCTCGGGCTTCTGCTACAGTCACCGCTGCTCTCTCCACACATGAGCAACGGTAACGGTTCTATCGGAGATCAGACCGGTGCCTGCGGCATCATTAAGGAAGAAGAGCTGGGCACGTCAATGAAGCCAACAACTCTGGATTTCTTGGGCCTTGGAGGCTCTCATGGACGAACGTTATCTCACACAGACTACGCCATGATCACATCAATGAGCTCCACCGGAGCTACAGGCAATGAAGTGGCCGTCCCCTCGTCGTTTACCAACCACAACAGTGGGGAGATTAACAAGAAACAGCACAGTTCTTCGCCAGCAAAGTTTGGGACAGCTCATAGCAAAGAAATAATTGCATACCAATGGGGCATTAAACGAAAGGTGGGCCAGGTTCTTCTGCAAGCCTAA
Protein Sequence:
- >Psi000796|Picea_sitchensis|C2H2|gnl|UG|Psi#S50072405;PUT-183a-Picea_sitchensis-14609
MLNGGLPAAAASSQAVGGPGSGSRANWNLVVKLENSERTTPTMTQSNVTSAASGEGATVSSAAATGGGGGSGAVQQSSAPLNNSSAQQQPGVPKRKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEIRKRVYICPEPSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARVTVNNTEPVATRTTTNSSSDDGPNPCPCPPDSHKVSISSTGGAVAPPPLSAGWGGQAPGGGGGGGGGGGAGPRLSLWLGPGPGGPGPPPTLDSASASSSTQFNVMDGTGTYPYPFLMRASNNPSERSAAAAELGRPTGGGGGGGGRGFMAPASASSLFASLLASGGLPAAQTPTGFSELIGAMTRGGNGSISTSTSSATTAAPAVFSTGIPAIFSHPQPPQVHHQQHNNTATAQMSATALLQKAAQMGATAASNNPSLLRGFGGLAGHDNSWPPMMAAANHSSEPYPLLRRLTEGIMPMPMPTSMPSSSSSSLDQVTMQELMNSLSTTASLGSLGLLLQSPLLSPHMSNGNGSIGDQTGACGIIKEEELGTSMKPTTLDFLGLGGSHGRTLSHTDYAMITSMSSTGATGNEVAVPSSFTNHNSGEINKKQHSSSPAKFGTAHSKEIIAYQWGIKRKVGQVLLQA