Information report for Pp3c7_12520V3.2.p
Gene Details
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Functional Annotation
- Refseq: XP_024380107.1 — uncharacterized protein LOC112284499 isoform X1
- Refseq: XP_024380108.1 — uncharacterized protein LOC112284499 isoform X1
- TrEMBL: A9SGA8 — A9SGA8_PHYPA; Predicted protein
- STRING: PP1S75_191V6.1 — (Physcomitrella patens)
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT2G28150
- Daucus carota: DCAR_029581
- Lactuca sativa: Lsa004734
- Manihot esculenta: Manes.10G153300.1.p, Manes.10G153300.2.p
- Nicotiana tabacum: XP_016493618.1, XP_016493615.1
- Populus trichocarpa: Potri.009G024900.2, Potri.001G232300.2, Potri.001G232300.1, Potri.009G024900.1
Sequences
CDS Sequence:
- >Pp3c7_12520V3.2.p|Physcomitrella_patens|C2H2|Pp3c7_12520V3.2.p
ATGGAAACGCATCCGGAGTTCTATCACAAAGTTGAAGTGCTCTACATCCTTATCCAGGGGAACGAGCAAATCGGTCATCCACACATGATACAAGTGCAGTATCCCTCCCATCAACAAGCTCCTACTCTTAGAGATGTAAAGTGCCGCTTGACTGCGCTCCGTGGGAGAGGCATGCCGGATTTATACTCCTGGTCTTACAAAAGGAGCTACAAAGGAAACTTCATTTGGTGTGACGTATTCGACAATGATGTTATACTACCTCTCAGTGGAAGTGGCGAATACGTTCTCAAAGCTCTGGAGGTTTTTGAGGTATCACTAGATGCCTTGGACCAAGAAGTAGCGGTGCACCAGGTGGCGGCTCAGTCGGCGATGAGGACATTGCCAAGAAATAGATGTAGAGGGACTGATCAATCACCGATGCAGGAGCAACATCTTACTGAAATGCATATTATTGGCAATGTCTGCAATACGATTTCTAGTATCTTGGAATCGAAGCACGATTTATTAAGCGACTCAGGACTCAATAACATCGCCACAAAGGTGTTTAGCAATTACCACATCGATATTTACAACTGCGGTAGACCTGCATTTGTATCTGGAGACTTGATTGAGAATAATAATGCCTTTGAAAAAATCAAAGTAAGTGATTCGTCAACATGCAAATGTGTCTCAAACGGGAACGAAGGAATTTTGGCTGAGCCCTGCGACACATCCTCAAACTTTATCTCTGGAATGCTCTCCTCACATAAGGACGCGAAGATGGAAGCGAAGGAGTTGCCAGTTGGTCTGATGATGGTTTCCTCTGACCATAGTGAGAAGTGTTCTTTTGTAGTCCCAGCAGCGGGATTTTCGGGAAGGGAATCCACTAAGAGGAGAACATGGGCTGTGAAGAAACAAGATAATTCTATGACAATCGATGGCAGAACCTCACGAAGGTCCAGCCAGGATGATCGAGTACCCACAATGAGTACACGAGACTCACCATCCACTTCGATTGCACGGCCTTGTTTACCAGTGCATCCATTTACTTTTATGGTAAAGAAAGCTATTAGGTTTCGGCGCACACAGTTGTGTACGAAAGTGGAAGTCGTGGAAAGATTCCGAACTGTACCGATCGAAGAACTTAGCTTCCTAAGACCCACATCGAAAAGTCAACATGGAATAGGGTCAAAGAAGGCATCTCCAAAGCCTCGTTACAGTAAAGCTGAGACTGAGAATTCCAAGCTTCAGAGGAGGGGTGAGATGACAGTTGGAGGACAACAGGGAGAAGTCAGAAGCCTCTCTGATGTTTTGGAGACTACGAGAAGTGGATGTAACTCACAGAAAATGGACAAAGAGAGTGTCAGAAAAACTGAATCTGCTCGACAAGTGGTTAATTTTGACGCTAATACTACTGCACGGTGCAGAGAGGTGGACGTTGTTTGTGAAACAGTTTTACTTCCAGAACGAGTCTCAGGGAAGGATCAGAAGGCCGTGTCCGATTTGAATAGCAACCAGCTGCTGTTGAAACCGGATACGAAAAGTTTCAAGGCGGTTACCAAACCAGCTGTGCAACACCCCTCTAAGCATGGCGATGAACAGTCCTCAGCTTCATTCAATCAAGGATTTGCCCATACCCATCATCTCCCCAAAGCTTTCAGACGTCAAGGGGCCACTGTTGAGATGGATCTCAAGCAGCAGAAGTCCCTCTTTCCAGTGTTGATAGGCGCTGCAGCTACCAATAAGACTTCCTTTGCTAGTAACGATTCTGTCCTGACGAATCAAAATCTAAAAGCGCTGAAATTTCCAAGGAAAGTGAAGAAGAATTTTCATAATAGTTTTCCTGTCCCGGGCTCAGAAAAGCGATTTTCAGATACGAAAGTATATCCATCAAGAGAAAGTTCTGTATTTGACTCTGCAGCGTTGCACGACGATATTTTGCAAGACGTGAACATGGTAAACCCAAAAGAAGAGTTGAAGGTTCAGATGCCTCCTGCCGCAACAAGCTCCCCTGATGAAGAATCAATGTCATCCACAACTGCACCTGTGAAGCAAGACTTCAAGCACAGAGAAGAGAGACCACTGACACCAGGTCTGACGGAGATGCATTGGGAGAACTTGCTTCAAAAAACCGATTTTCTCAGTCAACCTCCTCAGGATTTGGTTCTACATGAATGCTTTCAATGCGGGAGGACTTTCAAACCTGAATCGTTGAAAGTGCACTTGCGTGGCTGTCACATCATAAACAAGCCCAAGCCATCGGTTTACTTCAGTAAGAGAGTATCCACTACCTAA
Protein Sequence:
- >Pp3c7_12520V3.2.p|Physcomitrella_patens|C2H2|Pp3c7_12520V3.2.p
METHPEFYHKVEVLYILIQGNEQIGHPHMIQVQYPSHQQAPTLRDVKCRLTALRGRGMPDLYSWSYKRSYKGNFIWCDVFDNDVILPLSGSGEYVLKALEVFEVSLDALDQEVAVHQVAAQSAMRTLPRNRCRGTDQSPMQEQHLTEMHIIGNVCNTISSILESKHDLLSDSGLNNIATKVFSNYHIDIYNCGRPAFVSGDLIENNNAFEKIKVSDSSTCKCVSNGNEGILAEPCDTSSNFISGMLSSHKDAKMEAKELPVGLMMVSSDHSEKCSFVVPAAGFSGRESTKRRTWAVKKQDNSMTIDGRTSRRSSQDDRVPTMSTRDSPSTSIARPCLPVHPFTFMVKKAIRFRRTQLCTKVEVVERFRTVPIEELSFLRPTSKSQHGIGSKKASPKPRYSKAETENSKLQRRGEMTVGGQQGEVRSLSDVLETTRSGCNSQKMDKESVRKTESARQVVNFDANTTARCREVDVVCETVLLPERVSGKDQKAVSDLNSNQLLLKPDTKSFKAVTKPAVQHPSKHGDEQSSASFNQGFAHTHHLPKAFRRQGATVEMDLKQQKSLFPVLIGAAATNKTSFASNDSVLTNQNLKALKFPRKVKKNFHNSFPVPGSEKRFSDTKVYPSRESSVFDSAALHDDILQDVNMVNPKEELKVQMPPAATSSPDEESMSSTTAPVKQDFKHREERPLTPGLTEMHWENLLQKTDFLSQPPQDLVLHECFQCGRTFKPESLKVHLRGCHIINKPKPSVYFSKRVSTT*