Information report for Pp3c21_440V3.3.p
Gene Details
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Functional Annotation
- Refseq: XP_024358653.1 — uncharacterized protein LOC112273868 isoform X2
- TrEMBL: A0A2K1IQ91 — A0A2K1IQ91_PHYPA; Uncharacterized protein
- STRING: PP1S286_28V6.1 — (Physcomitrella patens)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0048235 — Biological Process — pollen sperm cell differentiation
- GO:0005634 — Cellular Component — nucleus
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0043565 — Molecular Function — sequence-specific DNA binding
- GO:0044212 — Molecular Function — transcription regulatory region DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Medicago truncatula: Medtr4g028610.1
- Ricinus communis: 50114.m000014
Sequences
CDS Sequence:
- >Pp3c21_440V3.3.p|Physcomitrella_patens|C2H2|Pp3c21_440V3.3.p
ATGCCCCATGCATGGATCGCACTCACCTCTACTTGCTCATGTATGGACATTGATCAGCCAGGTGAAGGCGATATCAGTGTAGTGGTGAAAGGCGAGCTCGGTGAAGTGATTGAGAGAGAGTCTGGCACTGAAGACTACTACCTCAAGGCTGAGGTGAGCAGTTCTAGGGGCAATGCGAGCAACACCAACCATTCCACACATGAGGGCTCTCTGGATCATCCACTCTCGCGCCTCCGCCGGAGCGACGCACTTTGCTCCCGTATTCGGAGAGTGAGCACGGCAAAGACGCGGTCTAGTTCTCTTACATCCCAAAGATCATCGGCCAAGTTGGATCCTCACACTGGAGCTACTCCGGATTTGAAGGTCGATAAAGACGCGAGGGGGATTAGGAAGAGAGTTGAGGATAGGGAGGAGCTGAGACGGTCGTCAAGTTCGGAGGAGTTGCATGGTGATGAGGATGGAGACGGAGACGAGGTAGATGCCACGCAGTACAGGTGTGGGATTTGCAATGAGGAGTTTAGCAGTGCAAAATCTTTGAATTTCCACAAGTGTCACCCCCAGTATACGTTGAGGCGCAATCCGAAGCGAAGTAGGAAGCTGATTGACCAGGAGGTTGGGAAAGAAGCAGGAGCAGTGACGACAATAGTGCAAGTTTCGGCAATCACGAAGAAGACGAGTTCGATGACTGAGGACTTTCCCAAGTCCTGCACCGAATGTGGGAAGGAATTCTTGTCTTGGAAGGCTTTGTTTGGGCATATGAGGTGCCATCCAGAGCGCGAGTGGCGTGGGATCCAGCCTCCAGCTGAGGAGAGCAATGCCCGGGGCCAGGGTAGCGGTGGGAATCATTCCAGTTCCAGGAGGAGGAGACCGGCTCCAGTGCTCCATGTCCATCCGCCACCTGCGCCGGCTCGGGAGGACAATGTCGAGATATCTGCATCCTTGAATTCAAGGCGCGTCACGCATGTATGGAGCAAGGCATCCGACGATGAGAGTGACACGGAGAGCATTGAGGCAGCGTACATGTCCAATGGCGACCGGGACATGGGCTATGGAACCACATGGTCGACGCGGTCGAAGCGGTCGCGTCAAACGCATCGCTCTCTGGACGCTGTGAGCAACGCGAAGAAGGAATGGGTCCCCAGTAGCCAGGGCAATATTGCGGCGGAGTCCACGGACATGGCTGAGACGCTCATGTTGCTTCAATGCAACCCAAACATGGAGAAGCTGGTGCTCATGTCGACGCCAGAGTCCCATGGCAGCAAATCGCGGACACCCGAATTTGGGGTGGAATCTGAGACAGAAGACGTGAATCTAAGAGATGCAAAAACCGAAGCAGCCAGCCCATGTGAGGATACTGAAGAATGCGTCGATGAATTTGAAGCTGGGGAGCAAGGCACCAGCACACGACCAAAGTACGAATGTGCAACGTGCAAGAGGCAATTCAAATCTCACCAAGCGCTGGGAGGCCATAGAGCCAGCCACAAGAAGGTGAAGGGGTGCTTCGCTCGCACCAACCCTGACGATGGCGGAGCACTAGACCACAGCATGGACACTTCCATGGATGCGGATGATGATTCGGAGCAACACAATGCCAAGTTTGAGGAGAAGCTGCTCCAGGAGCTCCCAGAGACTTCCCTCACCAGTCTAGAGGAAGACAAGGCGATCAGGGCTGACAACGAGGAGATGCCGACCACGGCCCGCAAGAACAAGTCCCACGAGTGCTCCATTTGTCACCGCGTTTTCAACTCTGGGCAAGCTTTGGGCGGCCACAAGAGGTGCCATTGGGGTGGTGGAGGTGCAGCGGGCGAGGTCACGAGTGCCAAGGCAGTTCAAGGTCAAGGTGTGCAAGGGGGGCAACCGAGCCGGCCCGTGAAAGAGGCAGTGCTGGACTTGAATTTGCCAGCTCCTGAGTATCTTGAGGAGATGATGGCCCAAGGAGAAGCGGAGGCAGGATCATTGCAGCTGCTGAACTACTTGCCAGCAGCAGCAGCAGCCAGTTTGAGCCTGCACCCCGTCTACGCATAA
Protein Sequence:
- >Pp3c21_440V3.3.p|Physcomitrella_patens|C2H2|Pp3c21_440V3.3.p
MPHAWIALTSTCSCMDIDQPGEGDISVVVKGELGEVIERESGTEDYYLKAEVSSSRGNASNTNHSTHEGSLDHPLSRLRRSDALCSRIRRVSTAKTRSSSLTSQRSSAKLDPHTGATPDLKVDKDARGIRKRVEDREELRRSSSSEELHGDEDGDGDEVDATQYRCGICNEEFSSAKSLNFHKCHPQYTLRRNPKRSRKLIDQEVGKEAGAVTTIVQVSAITKKTSSMTEDFPKSCTECGKEFLSWKALFGHMRCHPEREWRGIQPPAEESNARGQGSGGNHSSSRRRRPAPVLHVHPPPAPAREDNVEISASLNSRRVTHVWSKASDDESDTESIEAAYMSNGDRDMGYGTTWSTRSKRSRQTHRSLDAVSNAKKEWVPSSQGNIAAESTDMAETLMLLQCNPNMEKLVLMSTPESHGSKSRTPEFGVESETEDVNLRDAKTEAASPCEDTEECVDEFEAGEQGTSTRPKYECATCKRQFKSHQALGGHRASHKKVKGCFARTNPDDGGALDHSMDTSMDADDDSEQHNAKFEEKLLQELPETSLTSLEEDKAIRADNEEMPTTARKNKSHECSICHRVFNSGQALGGHKRCHWGGGGAAGEVTSAKAVQGQGVQGGQPSRPVKEAVLDLNLPAPEYLEEMMAQGEAEAGSLQLLNYLPAAAAASLSLHPVYA*