Information report for Pp3c19_9880V3.1.p
Gene Details
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Functional Annotation
- Refseq: XP_024360708.1 — histone-lysine N-methyltransferase SUVR5-like isoform X2
- TrEMBL: A0A2K1IXY4 — A0A2K1IXY4_PHYPA; Uncharacterized protein
- STRING: PP1S174_93V6.1 — (Physcomitrella patens)
- GO:0034968 — Biological Process — histone lysine methylation
- GO:0005634 — Cellular Component — nucleus
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
- GO:0018024 — Molecular Function — histone-lysine N-methyltransferase activity
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: CEY00_Acc06079, CEY00_Acc31052
- Gossypium hirsutum: Gohir.D03G018200, Gohir.A02G162200
- Juglans regia: Jr07_03090
- Populus trichocarpa: POPTR_005G129800v3
- Prunus avium: Pav_sc0000348.1_g900.1.mk
- Prunus persica: PRUPE_7G146600
- Rosa chinensis: RchiOBHm_Chr2g0103021
- Sesamum indicum: SIN_1003726
- Vitis vinifera: VIT_04s0023g00980
Sequences
CDS Sequence:
- >Pp3c19_9880V3.1.p|Physcomitrella_patens|C2H2|Pp3c19_9880V3.1.p
ATGTCTCTGCTCAAGCTCTTATTTGATATCCCCGAGGCGGGAGGCGAATCCAATTTCACTGTGGAAGAGCAGGAGGAGTTGATGGCCTTTGAACATAACCTTGATGATCATCTGGTGGGTAATTTCGCATTACCTGCCACTGATGACCAACTTAACTTTTTACAAGGGGCTGGGTTGCAAACTGAAGCTTCTCTGGAATCAGTCCAGGATCGTGTGGTCTTTCCTGTTGCTTATGGAACGCACAACAGACATGAGGTTGACTCGAATCACGGGGCTGGAGTAGGGAAAGAGGTTTTGCCGCTGATGAGCATGGTTATCGCTTTAGAAAATGGGCATGAACTTGGCAGCTCAACGATTGATCATGTCACACAGGAACTCTCTGGTATTGTTGCTCCTAGGACACAAGAGCCTGTTTCTCTTGAACAGGATTCTGTACCCCTTAAACCCCTGGTCCCTGTTCTAGCTACTCCTCCAGAGAACACTGCTTGCTCTGTGACCTTGGAGCCTGCTTTGGTTACTCTTGAGAATGCTCAAGTTTTGGAGCTTGCTGTTAATTCCCTCCAGAAGGACGCCTCGTCCAAGAAGGACCATACTAGCTTAAAGCATCAGGAATCTGGGAAGGCTGTGTGGATAAAGTGGAGAGGAAAATGGCAGGCAGCCATCCAGGTTAGAGTGGAAGACTGCAGAGTAGCAACTTTGAAGGCTATGCCTACGTATAGGAAAAAAGAATACGTTCCCATTTATCTGCTCACCAACCGAACATATATTTGGATAGATGCACAAAATATATGCGATATCAGCCAAAATCCGGAGCCTCTGGTAACAGGACTTCATAGTGATTGGCTTCGTCTGGTGGTCGATACCGGGGCACCAAGACGACGTACATTTTTGAGTTTGGGGTGGGAAATGCTTGATATAAGCGACCGACTCCACATATTGGGGGTGGTTGAAAGAGCACGATATGTAAGTGCTTGGAAAGAGTTTGCTAGGGAGGCAACTGAAGCAACCAAGTACTCAGAACTGGGGTCACTGTTAGTTCGTATACATGCTGTGGTTGAGCCAGTTTACGTACGACAGTCTTGGGTTAAGAAACGTCTGAGCGCATGGACAGAAGAATGTATTAAAGCTGGTACAGCGGCAGCTGTTGAGAAACTGACAAAGGAATGTATAAGAGTTATCCTTTGGGATGAGGCAGCAACTCTTTGGGAGGCTCCTGAGCAACCTGTGCTTGATCCAGGTTGGACAGACTGGAAAGGCCCGGCTTTTGACGAGCTGACGTTACCTGAGGATGACATTCCTGTGCCAGCTGACAAGACGTCCAGACCTTTTTCCTCTTTATCGATAACTCCAAGTCCAGCCCAAGAGAAACAATACACCGGAGCCAAGCGTGGTCGCAAACCAAAGGATAGAAGTGTCCAATCACAACATCTGGCTTCTGCTACACGCGTGACTACTAGAAAGCAAGTCAAAGTTGAGACGCGTAACGACGCGGGCCCCTCATCGTCTGCTGCCATGGGTACTCTGCCTACGCACTCGATGAAGAATGTCCAAAACTACTCTACCGATCATGCTGAGAAGACCCCAGATCAAGTAGGAGGTAACACTTTCGCTACACCAGTAAAAGATGATGGTGCGGTGGTGAAAATAGAGCAACTCAACCCCCAACTATCTGATCGGCGAACTCAAAAACATCTAAAAGGTGCAGCTTCTAATGGCAATGGAGGTTCTAAAATTAGTGGGCTTTCGACGGACCCGATCAATGACAAGAATTTAAGCAGACTTGTTGCTAATATGAGCGTGAGGGAAAAGAGGAGCTTTATCAAAGCACGAGAACTGCTCTGCCAATACATGAATGAAGGATTGTCCCTGCGTGAAGAAGGAAACGATGGAGCACAGTGCAATCAGATGATAGACTCTATTATTGATGAATTTGCAAAGGACTTACTCTCTGGAGAGATGTTGCTGAAAATACTCGCATCAGAAAAGGATAGACTAGCTAAGATCGTGTTGGAAGGTGGTTTAGTCAGCAGAAAAAGCTCAAATATTATTTGGGATGTTGGTTTGTCTGGTTCTCATTCTGGAGAATTTTGGAAGCCAGAGGTGAAAACAGTATCAAATGATGCTAGTGCTTGGCAGTCGACACCGTCTCCTGTACAGATTGGAGACAAAGGAGCTTGCCGCGATACTAGGTATTTATGTTCTTTATGTGGTCAGAACTTTGAGCAGTTATGTGTGCTCGGAAAGCATTGGAAGGAGCAGCACAAGCGGGAGGCGAGACTGTTTGAAAAATGTCTACTCTGTCGTATTTGTGACAAGAGTAATGCGATGTTCAGGAATAAAACAAGTGTTACGAGACATTTGAAAAAAACTCATCCAAATGTTTCAATGTCCTCGCAAGCTTGGTCAGTGTGTTTGATGTGTGACAAGGAGTACTTGGACTTTGATCACTTATGGCAGCATGTGGAGGATCAGCACCACAATCAGTGGAGTAACCCCGACTTTGCAAGGCGAGTGAAATCCACGCTGAAGCCACGCATGGGCCAAAAACGTAGTTTTTATTGCGAAACTTTCAATACATTGTGGGAAGTCAAACAACACAAACAAATTTTACATAGGGGTCCGGAGCTTTTGCGCTCTGGTACGAAAAGGAATTTTGATGCAATGAACAGTATGGTGACCGCAAACGATTCTAAGAGGGTTGACGTGATGCCGGCTAAGGACACGTATAAATACAGTTGTCGGTACTGTCCAATGAAGTTTCCAGTTCTTCCGGACCTGGGACGCCATCATCGAACTAAACATAAAGACAAAACGGATGAACTTGTTAAAGATCAGTTTCCCACCAACGGCATGCCATCTGTGCAAACGAGAAAGACGAAACACGAAGAAACGAGGGGTGACTGGCATCCTGTTCCTACAGGGAAAGGAGGTGACAGGGATGATAATGGGAAGAAATGGAGATATCGTGCAAGAGCTAAAGCCAAAAATGCAAGTAGAGGGAGATCTGTTTCTATGAAAAAGCGATCAGGTGGAGCAGAAGCAATTTTGCAACGCATGAGAGCCGTAAAGCAAGTTTTGAAGGAACAGAAGAAGAAACGGTCTCTTCGTAAGAGGGATAGAAAAGCAGAAAGTGCACGAAGATTAGCGAAGCTTGCCGGTATTAGTGGTACACTAACCCCAGCCCCTGCTCGTGTCACGACCACAGATGCGAATAGGTTTAAGTGCCGATTTTGTGGAATGAGGTTCGCTTTGTTGCCAGACTTGGCCCAACATCATCAAGTTGAACATTCCGCCGTCAAGCAGGCATTTATAGCCAATGGCCGTGGAGAGTGTCAGACAGGGATTTACACCCTAACCAATGATGGAATAATTGGCCCATTACAAGGTGAATTGTTGAATCGCGTCCCAACAGCAAAGAGTTGTTGGAGGTTGCTCGCAGTACCTGCTGTAAGGATTGGTTTTTTAATGAACTTGGCAAGAGCAAAATTAGAGATTCGTTGGCACCAAGACAAATATTTGTGCCCGGATGGCTGCAAGACTTATGGTGCAATACAACCAGTGCCAAGTTTGGAAATTGATCGGAGTGCACTTGCAAAATCATCTTCAAATGCTTGTGCAGGTCTGGATACGAAGAACTCTCAAGTGGGATGCTCATGCACTGAAGATGAGTGCTCGGCGTCCACCTGCGACCATATGTCCATGTTTGACACTGATAATACTGAAGCCTTCACTATTGATGGGAAATTCATTAGAGGCCAATTTCCTTATGATGAATTCGGCCGCATTATTCTTGATGTGGGATATATGGTTTATGAGTGCAATTCCAGCTGTCAGTGTAAAGATCCGTGCCGCAATCGTGTCCTACAAAAGGGTGTTCATTTGAAACTCGAAGTTTTCATAAGTCCACACAAGGGCTGGGGTGTGCGAGCAGCTGAGGCCATTTCAAGGGGTACATTTGTGTGTGAGTATGTAGGAGAGGTCCTCAACGATTCAGAGGCAAATAAAAGAGGAAAGAGTTGTGAACCAAACTTGATCAACTACGAGGTTCTTGTTGAAAGTCTGGACTGTCAATTAGCACATATTGGTTTTTTCGCCAAACGCGATATTGCACCGGGGGAGGAGCTTGCATATGACTTTAGGTATAAACTACTTCCTGGAAAGGGTTGTCCTTGTCAATGCGGGTCTTCAAAATGGCGCGGTAGGCTTTACTGA
Protein Sequence:
- >Pp3c19_9880V3.1.p|Physcomitrella_patens|C2H2|Pp3c19_9880V3.1.p
MSLLKLLFDIPEAGGESNFTVEEQEELMAFEHNLDDHLVGNFALPATDDQLNFLQGAGLQTEASLESVQDRVVFPVAYGTHNRHEVDSNHGAGVGKEVLPLMSMVIALENGHELGSSTIDHVTQELSGIVAPRTQEPVSLEQDSVPLKPLVPVLATPPENTACSVTLEPALVTLENAQVLELAVNSLQKDASSKKDHTSLKHQESGKAVWIKWRGKWQAAIQVRVEDCRVATLKAMPTYRKKEYVPIYLLTNRTYIWIDAQNICDISQNPEPLVTGLHSDWLRLVVDTGAPRRRTFLSLGWEMLDISDRLHILGVVERARYVSAWKEFAREATEATKYSELGSLLVRIHAVVEPVYVRQSWVKKRLSAWTEECIKAGTAAAVEKLTKECIRVILWDEAATLWEAPEQPVLDPGWTDWKGPAFDELTLPEDDIPVPADKTSRPFSSLSITPSPAQEKQYTGAKRGRKPKDRSVQSQHLASATRVTTRKQVKVETRNDAGPSSSAAMGTLPTHSMKNVQNYSTDHAEKTPDQVGGNTFATPVKDDGAVVKIEQLNPQLSDRRTQKHLKGAASNGNGGSKISGLSTDPINDKNLSRLVANMSVREKRSFIKARELLCQYMNEGLSLREEGNDGAQCNQMIDSIIDEFAKDLLSGEMLLKILASEKDRLAKIVLEGGLVSRKSSNIIWDVGLSGSHSGEFWKPEVKTVSNDASAWQSTPSPVQIGDKGACRDTRYLCSLCGQNFEQLCVLGKHWKEQHKREARLFEKCLLCRICDKSNAMFRNKTSVTRHLKKTHPNVSMSSQAWSVCLMCDKEYLDFDHLWQHVEDQHHNQWSNPDFARRVKSTLKPRMGQKRSFYCETFNTLWEVKQHKQILHRGPELLRSGTKRNFDAMNSMVTANDSKRVDVMPAKDTYKYSCRYCPMKFPVLPDLGRHHRTKHKDKTDELVKDQFPTNGMPSVQTRKTKHEETRGDWHPVPTGKGGDRDDNGKKWRYRARAKAKNASRGRSVSMKKRSGGAEAILQRMRAVKQVLKEQKKKRSLRKRDRKAESARRLAKLAGISGTLTPAPARVTTTDANRFKCRFCGMRFALLPDLAQHHQVEHSAVKQAFIANGRGECQTGIYTLTNDGIIGPLQGELLNRVPTAKSCWRLLAVPAVRIGFLMNLARAKLEIRWHQDKYLCPDGCKTYGAIQPVPSLEIDRSALAKSSSNACAGLDTKNSQVGCSCTEDECSASTCDHMSMFDTDNTEAFTIDGKFIRGQFPYDEFGRIILDVGYMVYECNSSCQCKDPCRNRVLQKGVHLKLEVFISPHKGWGVRAAEAISRGTFVCEYVGEVLNDSEANKRGKSCEPNLINYEVLVESLDCQLAHIGFFAKRDIAPGEELAYDFRYKLLPGKGCPCQCGSSKWRGRLY*