Information report for Pp3c17_23930V3.1.p
Gene Details
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Functional Annotation
- Refseq: XP_024401520.1 — uncharacterized protein LOC112294842 isoform X1
- Refseq: XP_024401521.1 — uncharacterized protein LOC112294842 isoform X2
- Refseq: XP_024401523.1 — uncharacterized protein LOC112294842 isoform X2
- TrEMBL: A0A2K1J5A5 — A0A2K1J5A5_PHYPA; Uncharacterized protein
- STRING: PP1S68_283V6.1 — (Physcomitrella patens)
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT2G28150
- Daucus carota: DCAR_029581
- Lactuca sativa: Lsa004734
- Manihot esculenta: Manes.10G153300.1.p, Manes.10G153300.2.p
- Nicotiana tabacum: XP_016493615.1, XP_016493618.1
- Oryza sativa: OsDSR2
- Solanum melongena: Sme2.5_06578.1_g00002.1
Sequences
CDS Sequence:
- >Pp3c17_23930V3.1.p|Physcomitrella_patens|C2H2|Pp3c17_23930V3.1.p
ATGGCACGTGGAGAAGATTCGTCAAGCGTGCAAGTGTTGTATCAACTCAGTTGGGATGGTAAACTTGAGCACCCCCATATGATCGAGGTCCATTACCCCCCCAACCAAGGCGGCCTGCGTTTGAGAGATGTGAAGAAGCGACTTACCACGCTTCGAGGGCATGGCATCAACGACTCGTTTTCCTGGTCCTCCAAGAGAAACTACAAGAACGAATTTATCTGGAACGATCTGTGTGATGACGATGTGATACAACCGCTTCGCGGCTCTGGAGAGTACGTTTTGAGAGCTTCAGAATTGTTTGACACCTTCACAAATAAGCCATGGGAGCATCCAAGCAAACACTCGAATGAACGAATGCAAAGCTCTCGAACAATGTCAGTCGACAATGTCACTTTACAGCAAGGCTTGATTAATGTTAAATTGCATTCAGGAGCCCTTGCCCGTGAAGACGACCAACCCAGTGGGGAGAAATTGTGCTGCTCGGGTCGAAGGTCATGCATAAATTTGGAGGACTGTAGCTCGAAAGGTGTTGCGATTGACATTCCCAAGAACCTGCAGAATCTGTCGGTGGATCAAGAAACAATTGATGTGGAGAAATCAGACTTCTGCTTATCATCTTCCGACAACGAAGTCTCTCCTCGTCTCAAAACGGCCGCCGACTGCATAACACCTGTAAAAGACGTTGGGCTGGTTGTGATGACGAGGTCGACAACAGTGCATGGTCTTCACACCCCTGCACCGAGATCTCTCACCTCGCCGACGGAACCACCCTTCTCTCCTGGTAGCGCGAAGAGAATGTGGAAGAAAGAAATTAGGAAGAGTCTCTTTCGAACTTCGAGAAACTCGTCAAATGTGAACCCTGTCTTAAGTGGCGAAAACGCTGCCTTGGATGTGGATGTTCCACCAATCACTCTAAGCACACAAGAAGATGTCTCGTTCTGGAGGGACGGCCGATCAAAAAGCGCGAGCCCTTCAAGTCTCAATGAACTGAGAGAGGTGCAGAACGAGAAAGAGAAAGAGGCCGAACAGTCCACCTCCCAATTGATCAGATTACTCTGGGCTCGGTGGACCGGAGGAAGCAGCAAGGGTAAGCGGACTCCTCAAAGCACATGTGAAGATCCACTCCCAAAGTCACCTGAAGCCAAGCAAATGCCACGGTCTCGCACCAAAACGCCCTGCAAGGAAATTAGATCGACAAACCACATTGCAGGATCCCTTCCAGTGACATGTCCATCTCCCGCAGTCGATAACAAGGCTCACAGTTCACTTGACAGGCAAGAGATCCCACCGCAAGAGGAGTGTAAAAATCGTCCGTCACCGATGACTCTTCAAAGCTGCGAAGAGATTACAAGTCCAGTTACGGAAATTGAGCAAGACGTAGAAATCGGTGACATCAAGGCAATTGTGGAAGAACAGGCCTCAAATAAATTCCCTGAACCGGAATTTCAGCAGAATTTGAGAACGGAACAAATAGTGCTGTCAGTGCAAATACCTGATTTGCACATTGACGCACTTGACAGTCCGACATCTGACACCCAGGGCAGCCCTGCAGAAGCCGACATCCCGAAATCTGCCACAGCTAGAGTGAAAACAAGCAACAGCCTTCCTAGGGTAAAGACAACCACATCACCGAAGCCTCTACCTCCGGGATTTCATAAAGGCACTAACGATACAAAACCAGTACAGATCATCACGCCGAGGAGAACCCCTAGAACTTCTATTCCACTTGCGTCTCCTCCTCCACTGGTGCGGACTTTCAATAGAGTTTCAGTTAGAAGCCTTAGCTCGATTGCTGCCATCACACTGTCGCCAGAAAATGATTCCGCTGCCTCCAATCTTTCGCCAGAGAATCCAATTGTGAAGAAACGCATCAATTTCCGTGAGAGAGATGAGATGCCTCTTATACCTGGATTGACAACTTTGGACTGGGAGAAAGCACTGCAAGAGGCTGTTACTGATTGCTTACCTCCACCGAACTTTAGAGAAATCCTTCAGGAGTGCTCGACTTGCGGAAGGACATTTAAGCCAGACTCGTTGCAGGTGCACATGAGAGGGTGCCATCCTCCACAATATGCACGAGCATTCTCTGCGCGGGCATCTCCACACGTCGTCCGATCTCGAGCTTCGTAA
Protein Sequence:
- >Pp3c17_23930V3.1.p|Physcomitrella_patens|C2H2|Pp3c17_23930V3.1.p
MARGEDSSSVQVLYQLSWDGKLEHPHMIEVHYPPNQGGLRLRDVKKRLTTLRGHGINDSFSWSSKRNYKNEFIWNDLCDDDVIQPLRGSGEYVLRASELFDTFTNKPWEHPSKHSNERMQSSRTMSVDNVTLQQGLINVKLHSGALAREDDQPSGEKLCCSGRRSCINLEDCSSKGVAIDIPKNLQNLSVDQETIDVEKSDFCLSSSDNEVSPRLKTAADCITPVKDVGLVVMTRSTTVHGLHTPAPRSLTSPTEPPFSPGSAKRMWKKEIRKSLFRTSRNSSNVNPVLSGENAALDVDVPPITLSTQEDVSFWRDGRSKSASPSSLNELREVQNEKEKEAEQSTSQLIRLLWARWTGGSSKGKRTPQSTCEDPLPKSPEAKQMPRSRTKTPCKEIRSTNHIAGSLPVTCPSPAVDNKAHSSLDRQEIPPQEECKNRPSPMTLQSCEEITSPVTEIEQDVEIGDIKAIVEEQASNKFPEPEFQQNLRTEQIVLSVQIPDLHIDALDSPTSDTQGSPAEADIPKSATARVKTSNSLPRVKTTTSPKPLPPGFHKGTNDTKPVQIITPRRTPRTSIPLASPPPLVRTFNRVSVRSLSSIAAITLSPENDSAASNLSPENPIVKKRINFRERDEMPLIPGLTTLDWEKALQEAVTDCLPPPNFREILQECSTCGRTFKPDSLQVHMRGCHPPQYARAFSARASPHVVRSRAS*