Information report for Pp3c13_23600V3.1.p
Gene Details
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Functional Annotation
- Refseq: XP_024392210.1 — uncharacterized protein LOC112290301
- Refseq: XP_024392211.1 — uncharacterized protein LOC112290301
- Refseq: XP_024392212.1 — uncharacterized protein LOC112290301
- Refseq: XP_024392214.1 — uncharacterized protein LOC112290301
- Refseq: XP_024392215.1 — uncharacterized protein LOC112290301
- Refseq: XP_024392216.1 — uncharacterized protein LOC112290301
- Refseq: XP_024392217.1 — uncharacterized protein LOC112290301
- TrEMBL: S6BP58 — S6BP58_PHYPA; STOP1-like protein
- STRING: PP1S37_244V6.2 — (Physcomitrella patens)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0010044 — Biological Process — response to aluminum ion
- GO:0010447 — Biological Process — response to acidic pH
- GO:0005634 — Cellular Component — nucleus
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Musa acuminata: GSMUA_Achr6P18840_001
Sequences
CDS Sequence:
- >Pp3c13_23600V3.1.p|Physcomitrella_patens|C2H2|Pp3c13_23600V3.1.p
ATGCAGGGTGGCAATCAGCAGCCCGCACCAAGTCCAACGAATGATTCTCTGTCTACCCTAGCCTTCCTTCATCATCAGCTGACTCAGCAGTTCTCGACCTCTAATTTGCCAAATACACCCTTGCTCTCTTCATCTCTTGGGTTCTCCATGAGTGGCAATGCTCAGGATCAAAGTCATACGCATCAGAACATTCAACAGCAACAAATCCAATCAATGATTTCAGGCGGTGGAAGCAGAGGTCATGCACAAGTAGGGAGCAGAAGTGGTGAAAGCCCTGGAGGGTTGTTTCAGCACTTGCAGCACGGGAACAGGGACTCAAATCTCGATCAACATCAGTTTTATAATGAAACGACGAATCAACTCTTTTCCGAGAATGTTTTGAACCAGGCTTCCTTGGTGGAACAGCGAGTGCGAAGTATCACGGAGCATCTGTCCATGCTTCAGGATAGGATCCAGCAGCTGCAAGCCCTTGTGCCTCTTATCTCTCAGCTTTCACATTTCCAGAATGAGGGCAATGTTCTAGCCCAACAGCAGGTAGCAAGTGCCGCTGTTGTAAGTATTACCTCTCAGTTGGCGATGGTGGCCGTTGATCTCCTTCTACAGTCGGGTGTAAACACTGGAACTCAACCGAACCATTCAAAGGAAATGCATTTGAGCCAGCTGCTGCAAAATGCTGCGAATCCAAACTTTTCCCAGCAGAATGCACCGAGGCATGACCTGAGAGCACCTCACATGAGTCATTGGATGGAAAAACTATTAGGAGGATCATTTGCTGCCTCAGAAGGGGTTAATGCAGCCATTACCTCTGGCAACGGTGGGATTCGATTTTCTGGTGGAGGAGGTAATTTCCCTGTTCTGATTGACGATGTTGAAAACTCAGGACAGCAAAGTTTAAGTGGCGCCCAACAGGTTGGTGGTAACGGCAGTGCGGGGTCAATGATTCACTATCCGATGAGCAATATGATTGGAAAGGATTTTGGAAGTATTTTAGATGGCAAAGACCGCAAACCCTCCGATGTCCTAGGTAGCTCTTCACGCGAAGGAGATTCAGGTGCAAATGAGTTTATTTCCGTTGAGTTAAGAGGGGTGAATGCCGGCCTGGAGGATCTGGACAATGATTCCCGAGTTGATGACGAGGGTAGTGACAGCGACAATATCTCTCCTGGTTCGTTTGATCTTGTGGAGATGGACGCTACGGAAATTTTGGCCGAGCACACACATTTCTGTGAGATCTGTGGGAAGGGTTTCAAGCGTGACGCCAATCTGAGAATGCACATGCGAGGTCATGGCGACGTGTATAAGACTGCTGCAGCTCTTGCACGTCCCGACAGAGGCACACAAATCCCTACATCGAACGCTTCGAGGCGATACTCCTGCCCGTATGTGGGATGTAAGAGGAACAAGAAACATCGCAAGTTCCAGCCTCTAAAGACTCTTCTGTGTGTGAAGAATCACTATCGCCGTAGCCATTGTCCGAAAGTTCTCAATTGCCAGAAGTGCTCGACGAAGAAATTTTCAGTTGTTGCGGACTTAAAGACTCATGAAAAGCACTGTGGTCGTGAAAAGTGGCTGTGTTCTTGTGGCACTACTTTTTCACGGAAAGATAAGCTTGTGGGGCACATTGGTTTGTTCGTGGGTCATGCTCCTGCAATGCCTCTGCATGATATGGAAGGTGGGGTTGGATCGAATTTAATTGTGGATCATCACCAGTCACCCGCTGAAGCGTTTGGTTTAGGAAGCAAGTCTCCGATGGCTTTTTGGGAATGA
Protein Sequence:
- >Pp3c13_23600V3.1.p|Physcomitrella_patens|C2H2|Pp3c13_23600V3.1.p
MQGGNQQPAPSPTNDSLSTLAFLHHQLTQQFSTSNLPNTPLLSSSLGFSMSGNAQDQSHTHQNIQQQQIQSMISGGGSRGHAQVGSRSGESPGGLFQHLQHGNRDSNLDQHQFYNETTNQLFSENVLNQASLVEQRVRSITEHLSMLQDRIQQLQALVPLISQLSHFQNEGNVLAQQQVASAAVVSITSQLAMVAVDLLLQSGVNTGTQPNHSKEMHLSQLLQNAANPNFSQQNAPRHDLRAPHMSHWMEKLLGGSFAASEGVNAAITSGNGGIRFSGGGGNFPVLIDDVENSGQQSLSGAQQVGGNGSAGSMIHYPMSNMIGKDFGSILDGKDRKPSDVLGSSSREGDSGANEFISVELRGVNAGLEDLDNDSRVDDEGSDSDNISPGSFDLVEMDATEILAEHTHFCEICGKGFKRDANLRMHMRGHGDVYKTAAALARPDRGTQIPTSNASRRYSCPYVGCKRNKKHRKFQPLKTLLCVKNHYRRSHCPKVLNCQKCSTKKFSVVADLKTHEKHCGREKWLCSCGTTFSRKDKLVGHIGLFVGHAPAMPLHDMEGGVGSNLIVDHHQSPAEAFGLGSKSPMAFWE*