Information report for Potri.002G097700.2
Gene Details
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Functional Annotation
- Refseq: XP_002302301.1 — uncharacterized protein LOC7461780 isoform X1
- Refseq: XP_024451191.1 — uncharacterized protein LOC7461780 isoform X1
- Refseq: XP_024451192.1 — uncharacterized protein LOC7461780 isoform X1
- TrEMBL: A0A2K2BGF1 — A0A2K2BGF1_POPTR; Uncharacterized protein
- STRING: POPTR_0002s09790.1 — (Populus trichocarpa)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Potri.002G097700.2|Populus_trichocarpa|C2H2|Potri.002G097700.2
ATGGCCACTGCCACCGTGGACTCATCCATCTGCGACCTCCAGAATCATCTACACATCGAATCTCTCCCTCTAATCGACCTCCGCCATCTTTCCCAATCCGAACTCCTCTCCCTCTCCTTCTGTTCCTCCTCTCCCCACCGTCTACGAACCGACACCGCTGACGTATCCACTCCTAAAATCGACCGTTCCGTCTTCAATGAATCTGCTGGAAGCCGCAAACAAACTTTCTCCCGCCTCCGCCTCGCCCCTCGCAATAACAATGCTTCCCCTTCTTCGAATTCAACTCCTGTTGTTCCCTTCCAAAATACAGAACGGCAGCCTCTCGATGAAGAGAATTCACAGATAATTTCTCTTCTGAAGTCGTTGTTTGGCTCTGATTCTAACTCAATCGAAAACAAGAATGAGCATTATCACAAACTAGTCTCCATTCCTGTTATCTACAATGATTATATGCGTCTGCCTTCAACAAATAATGCGGAATCGCAAAATGTTTCAATCGACATTTGGGATTCTAGTCAAGGAGGACTGAAAAGATTAGAGGTAAATCATTCGATTTCGATTCGAACTGCTGAATCTAGTTCAAAGAAGAGGAAGCGAGGCAGGCCACGGAAGAATGAGAATGTCAATTTCGATAATAACGATAATAGCGAGTTAGTTGAGAATAAGACTATTGCTGTTGTGTGTGACAATGTGGAAGTGGAGAGTAAGAAGAAAGAGGAGATGGTGATGGTAAATAAGAATGGAGTGGTGGTGGACTTTGGGGCATTGGGGAATATGGAGGATCCATACGGGGAGGAGTTGCGGAGGAGGACTGAGGGAATGCAATTGAAGGCAGAGTTTTTAGGGTTTTTGGAAGGGTTCGAGGGTGAATGGGGTAGTATGAGAAAGAAGAGGAGGATTGTGGATGCTAGCCTGTTTGGGGATGTGTTGCCGATTGGGTGGAAGCTCTCTATTTGCATCAAGAAACAAGCCGGTCGTGTTTGGCTGGCTTGTACAAGATACATAAGCCCTAATGGGCAGCAGTTTGTGTCCTGCAAGGAAGTTTCATCGTATTTGCTCTCCTTTTCCGGACTGCATGATGTAAGCCGGTTGAATTTTGGTCACATGGATGGCAGGATTAAGTTGACCGACAAGATATCTCCTTCCATTCCTGCAGATCATACACGTAAAGATGGCAAGAATGAGAATGATTTTATTAGCTATATGGCATTGCCTGTTACCTGTAGATCTATTGAGATGGGGGGATGTCCTGTGGAGGTTCAAATGGGGAATAAGTATAAGTGCCACAAGTGCACCGTGGCTTTTGATAAGCAGGATGACTTGCTTCAACACCTGCTATCTCATCAGCGGGCTCCAAAACAGCTTAGATTTGGGACATCCACAAATGAAGAGGTGATCATAAAAAATGGAAAGTACGAATGTCAATTTTGTCACAAACTTTTTGAAGAAAGGCATCGTTTCAATGGTCACCTTGGGAACCACATAAAAGAATATCTTAAGAGACTTGATGCTTCCAATGGCAAAACCACTGGAGAGAGCGATGAACCTGCATTGGTCAAAATTCCTCCTGGAGCTGGAAAGATCCAAACATTGATTGAATTTGACAGGGATTCTGATGCAATAACTGTTAACACTAAAATCAGTGATGAAATAAACTCCACCATTCCATATTGTGAATTAAAGGCTATTACTTCTGTAGAAACCCATTGTGGCGAGCAGGACAGAGTTTTTATTAGCAGCAATGATGGAGCGGGGAAGATGAATGAAGATACTGATGCTGTGGCAGCTGAAAATAGAGTTTCTTCTGAACCAGCCTTGTTGAATAATGATATTCATAGATCTTCTGATGAAACAGATGTTCCCAAGTGCCCCACCAATGGCACCAGTGATCTTGGTAGGAAGGATAAAAGCTTTAAAAACTGTTCAGTTGCTGGTGGAGCAAGGGACGTGACTTGTATTGGTCACAACAATTCAAATCATGTATCTCCTTGCTTAATTGAGGAACTCAATCAGGAGAGAGATTCTAATTGTGGTTTGCTTGCATCAAATGCTAAGGTGAACACATCTAATGATGACATTATTGAGGATAGACATTGTTCTAGTCCAATTGATAACATGGTAATTGATGGTTGGGGTATAGATGGAAAAGGTGAGCCAATAACTGGCTGTTGCAACAGTTATGCTGCAATGGGGGGGAATGCTGCTGTTAACTTGAGGGAGCAAACAATTTCTGAAGGCTGTTATGTTGCAGATAGTGAGACAGGTCTTTTTACTTTCAATGCAGTGGAAACCATGCTGGAAAAAGGTTCTAAAGGGGGTTTAACAGGTATTGAGAACAACATGAACAGTGTTTGTACTGGCATGTCAAATGAGAGCAGATTTGATGATGTGGTGAAGTCTGGGACTAATGAGATAACAATTGTTTGTTGTGGCGATAACACTGTACTGGCTGGTGATAATGTGACTAGCAATGAACAGGGGGGAAATCATGGGGCCGGCTCAGTTATTCCATTTTTGTTGAATCAGCATACACATCTTGTTGAAAATACTATCACAGGGGCTCCTAAATGCATACTAAGAGAACCCTGTCAAGGAAAGGAATCCGAAGATTGCCCGATTACTACATCTGGTAATGAGCAATTATTCGACTTTGAAAGTAATGTAATTAAGGTTTCTAATGGCACAATAGATGTGGCCAATCATGATCAGGTTGGCAGTGAGATTGATCTAGTCCCACAAACCTTAACTAGTATTAAGCAGGAAGAAATTTCTAAAACCCTTACATTTGCTCCATTTACAAATGGATTTGCTTCAAAAGACTATGGTATCTCCAATAGTGTACTGGAGAAGCTTGAGCAGGGTAGAAATTCTGGACGCGGATCATCTGACAATGAGCAATCCCATGATGTAAAGGATATTGTGAATGGTTTATCATTCACCACAGTGGAGGAAGACAATCAACAGGAAGTTAAAATCTCTTGCAATGGTGAGCTACATATTGCTTCAGATGACAATTGCACTGAACAGGATGCAGATGTTGGGACAGGCACTGTGCAGAAATGTTCTCTTTTTGCTGGGAGTCAGCTCGCATTCACTGCCAAAGATAATCCCACTGGTCCCTACAGTGGTGCTGTGGATGAGCTGAAGCAGAAAATGGATTCTGTAGAGAGTGCGGTTTGTCCATCTGGCAGCGAGCCAGTGTGGAGCGTTGAAAAGAATTTGCAGACTGCTTTTACAGGTTCGGTTCAGGAGGAGCCTAGGGTAGAGAACTCAGAAAATCCTAGGAAGGATGATTCAGGGATTGGTTTTAGCAGCCACCCTGGACCAGATGAAAGTGATGTCATATCTGAGTTTATGTGGAGAAACGATGAAGAAAGTAACCTGCTAAGTGATTTTGCTGATACTTCATGTCAACCAGTACAAACATCAAGCTTTTTTCCTCCATATGATGCAGTGTCAGATAAGGGTGAAAGTGAACTTTTTGCAGAGAAATTTGGTGCTACATCAGGTTTTGAAGGGCTGAAATTGGGTGGCATGGATAATATGGAATGTAATCTTCCGACTTCTCAAGAAGATTTGCCTTTTGTGCCAAAAGATTCAAGCAGGCACCATGTTCCTGCTGTGTGTGTCTGGTGTGGGAGGGAGATTTGTCAGGAGGCTCTTGAATCTGAAGGACAAACAAGCACCATGGGTTTTATGTGTGCAGAGTGCACTGCCAAGTTGTCCGGGCAATTCAACGGATAG
Protein Sequence:
- >Potri.002G097700.2|Populus_trichocarpa|C2H2|Potri.002G097700.2
MATATVDSSICDLQNHLHIESLPLIDLRHLSQSELLSLSFCSSSPHRLRTDTADVSTPKIDRSVFNESAGSRKQTFSRLRLAPRNNNASPSSNSTPVVPFQNTERQPLDEENSQIISLLKSLFGSDSNSIENKNEHYHKLVSIPVIYNDYMRLPSTNNAESQNVSIDIWDSSQGGLKRLEVNHSISIRTAESSSKKRKRGRPRKNENVNFDNNDNSELVENKTIAVVCDNVEVESKKKEEMVMVNKNGVVVDFGALGNMEDPYGEELRRRTEGMQLKAEFLGFLEGFEGEWGSMRKKRRIVDASLFGDVLPIGWKLSICIKKQAGRVWLACTRYISPNGQQFVSCKEVSSYLLSFSGLHDVSRLNFGHMDGRIKLTDKISPSIPADHTRKDGKNENDFISYMALPVTCRSIEMGGCPVEVQMGNKYKCHKCTVAFDKQDDLLQHLLSHQRAPKQLRFGTSTNEEVIIKNGKYECQFCHKLFEERHRFNGHLGNHIKEYLKRLDASNGKTTGESDEPALVKIPPGAGKIQTLIEFDRDSDAITVNTKISDEINSTIPYCELKAITSVETHCGEQDRVFISSNDGAGKMNEDTDAVAAENRVSSEPALLNNDIHRSSDETDVPKCPTNGTSDLGRKDKSFKNCSVAGGARDVTCIGHNNSNHVSPCLIEELNQERDSNCGLLASNAKVNTSNDDIIEDRHCSSPIDNMVIDGWGIDGKGEPITGCCNSYAAMGGNAAVNLREQTISEGCYVADSETGLFTFNAVETMLEKGSKGGLTGIENNMNSVCTGMSNESRFDDVVKSGTNEITIVCCGDNTVLAGDNVTSNEQGGNHGAGSVIPFLLNQHTHLVENTITGAPKCILREPCQGKESEDCPITTSGNEQLFDFESNVIKVSNGTIDVANHDQVGSEIDLVPQTLTSIKQEEISKTLTFAPFTNGFASKDYGISNSVLEKLEQGRNSGRGSSDNEQSHDVKDIVNGLSFTTVEEDNQQEVKISCNGELHIASDDNCTEQDADVGTGTVQKCSLFAGSQLAFTAKDNPTGPYSGAVDELKQKMDSVESAVCPSGSEPVWSVEKNLQTAFTGSVQEEPRVENSENPRKDDSGIGFSSHPGPDESDVISEFMWRNDEESNLLSDFADTSCQPVQTSSFFPPYDAVSDKGESELFAEKFGATSGFEGLKLGGMDNMECNLPTSQEDLPFVPKDSSRHHVPAVCVWCGREICQEALESEGQTSTMGFMCAECTAKLSGQFNG*