Information report for PK11424.1
Gene Details
Functional Annotation
- Refseq: XP_024019874.1 — LOW QUALITY PROTEIN: uncharacterized protein LOC112091165
- TrEMBL: A0A2P5C4J3 — A0A2P5C4J3_PARAD; TFIIH C1-like domain containing protein
- STRING: XP_008237173.1 — (Prunus mume)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >PK11424.1|Cannabis_sativa|C2H2|PK11424.1
NNAGCGGTTGCCACCAATCGGCCCCAAACGCAACCGGAGCCAACTTGGAAACTCGATTGCCTTTCTCAGATAGATATTAGCTCCCTCTCCCAGTCGGAACTCCACGCCCTCTCCCTCTGCTCCTCCTCCGCCTTCGACCTCCACTGCACCGACGACATCGTCGTCCCCAAAATCGACCCTGCCACCTTCAACGAAAGCGCTGGCTCTCGTCGCCAGACTTACTCTCGTGCTCGCCGCTTACTGTCCTCTCCGTCGTCGTCGCCCTCCGTGCGCACTGTTGCTTCCGCTGCCACCGGTCATCGTCGTCGAGTCGCTGGACTTGTTCCGACTCCTAAGGTCTCGCATATCCTCGCTGATGATCCCGAACGCCGCGAGAACCGTTTGATCATCGATCACCTCAAGCGTTTCATCTCGCAAGACCCTCAATTCAACTATGTCGAGTTCTCTCAGCCTTCGTCGCAGATGGGAATGGAAATTGATTCCGACGGTGGGCGAGGAATTTCGATGTTCGATAATGGATTGGCATTGACGAATTTTGGCGGAGAGAGGAAGAGAAAGAGAGGCAGGAAGCCCAAATTGTTGAAGGTCCAACTGGAAATGCAAAATGTGGAGCCTCATAGTTATCGAAGTCTGGAGATGGTGAACAGGAATGGCGTGGCGGTTGATTTTTCGGCTTTGGGAAATGCGGATGATCCATACGGAGAGGAGTTCAGAAGGAGAACAGTGGGTTTGGAGAGCGAGGAAGCGCTTCTAGGGTTTCTCAGAGAGTTGGATGGGCAATGGGGAAGTAGAAGAAAGAAGAGGAAGATTGTGGATGCAAGTGAGTTTGGTGATGCCTTACCCATTGGTTGGAAACTTCTGTTAGGCCTCAAGAGGAAAGAGGGTCGTGCTTGGATTTATTGCCGGAGATACATAAGCCCTAATGGACAACAATTTGTAAGCTGCAAGGAAGTTTCTTCATATTTGCAATCTGTTGGTGGTCTCAATACCCCGCATCTGTTGAATGATCACAAAAATGAAAATATTCAGGAAGACAGGCCGATCACTGAAAATAATGCAGGTTTGATCTTTAAGGAAGGAGAGCAGAGACAAGACCTAAATTTAAGTTCTGCTCTACCCACTCCTACATCTAATGAGCAAGAGAAAGAAATTTCTTTATTGGGGATTGAGAATCTTGCAGAGGTTCAGATACATGCCCTCTTTGAATGCCACAAGTGCAGTATGACTTTTGATCAGAAGGATGCATATTTGCAGCACCTTTTGTCCTTTCATCAAAGGACTACCAGGAGGTATAGGCTTGGTTCATCTGTTGGAGATGGAGTGATAATTAAAGATGGAAAATACGAATGCCAGTTTTGTCATAAAGTGTTTCTGGAACGTCGACGCTACAATGGTCATGTGGGGATACATGTAAGGAATTTCGTGAGGAAAGTTGAAGATGTGCCCGGTTCAAGTGCTCAAGAGAAAATTGAAGAGCCAAGCACAGAAGACTTGCCTGCAAGGATCTCTAAAATGGATGCTTTAGTAGAAATTGCTCAGAATTCAATACTAGAAACTTCTGTGGGACATGACGATGGATCAAAAGGTGACTTTGCTCCTGATAATTCTCTTGCAATTTTAAGTTCGGATTTTCATGTTTTGAATCCCGACCATGAAATGAACACGGTGTATCCTCATAGTGAACCTGATCTTGATGATTGCATGATCGACCAAGATCATTTGGATCGTCAAGAAGATGAGCATGTGTTCAGTGAGGGAATCGGGAAAACTGATGGTGCTTGTGAAATTTTAGACAATAAGATGGATTCAGTACCAGATAATTCAACTCTTCTTGCTACTAGAAAGCTAGAAAATAATGCACCTGAACATTTTGTTCAGGAAGATAATTCATTATTTAACTTTGATAGAGTAGAAAGACCTGCCATTGAGCTGGGAGAGGTTAAAGAATGTGATAGTATTTGCAATGTTGAGAACGAAGCAAAAATGGATTATGGCAGCACCTCAGAGAACCTGAAGCCTGTTGAAGTAAATGCTTCCAAGAATAACACACTTGAAACAGACACTGATATTAATATAAATGGTCCAACTAATGACACTGCAATAGAGAATATACAACAATGTTCCGAAGGAAAGGAACTGCACCTTGAGGTTTCCGAGTCTTCAACATCCATGCCTCAACCATTACCTTGTTTTTCCTCATTGAATGAAACGTCAGATAAGAGACAAGCAAGTGTAACGGGATTTGAAGAGCTGAGGCTGGAAGAAATAGAGCCTTTGCAGTACAGTTTTACTGGTGACCAA
Protein Sequence:
- >PK11424.1|Cannabis_sativa|C2H2|PK11424.1
XAVATNRPQTQPEPTWKLDCLSQIDISSLSQSELHALSLCSSSAFDLHCTDDIVVPKIDPATFNESAGSRRQTYSRARRLLSSPSSSPSVRTVASAATGHRRRVAGLVPTPKVSHILADDPERRENRLIIDHLKRFISQDPQFNYVEFSQPSSQMGMEIDSDGGRGISMFDNGLALTNFGGERKRKRGRKPKLLKVQLEMQNVEPHSYRSLEMVNRNGVAVDFSALGNADDPYGEEFRRRTVGLESEEALLGFLRELDGQWGSRRKKRKIVDASEFGDALPIGWKLLLGLKRKEGRAWIYCRRYISPNGQQFVSCKEVSSYLQSVGGLNTPHLLNDHKNENIQEDRPITENNAGLIFKEGEQRQDLNLSSALPTPTSNEQEKEISLLGIENLAEVQIHALFECHKCSMTFDQKDAYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKYECQFCHKVFLERRRYNGHVGIHVRNFVRKVEDVPGSSAQEKIEEPSTEDLPARISKMDALVEIAQNSILETSVGHDDGSKGDFAPDNSLAILSSDFHVLNPDHEMNTVYPHSEPDLDDCMIDQDHLDRQEDEHVFSEGIGKTDGACEILDNKMDSVPDNSTLLATRKLENNAPEHFVQEDNSLFNFDRVERPAIELGEVKECDSICNVENEAKMDYGSTSENLKPVEVNASKNNTLETDTDININGPTNDTAIENIQQCSEGKELHLEVSESSTSMPQPLPCFSSLNETSDKRQASVTGFEELRLEEIEPLQYSFTGDQ