Information report for Phvul.001G186700.1
Gene Details
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Functional Annotation
- Refseq: XP_007162855.1 — hypothetical protein PHAVU_001G186700g
- TrEMBL: V7CXK7 — V7CXK7_PHAVU; Uncharacterized protein
- STRING: XP_007162855.1 — (Phaseolus vulgaris)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Glycine max: Glyma.10G251100, Glyma.20G142500
- Lactuca sativa: Lsa010343
- Malus domestica: MDP0000233616
- Panicum virgatum: Pavir.2NG262600.1.p, Pavir.2KG218200.3.p, Pavir.2KG218200.1.p
- Setaria italica: Seita.2G131900.1.p
- Setaria viridis: Sevir.2G137100.1.p
- Solanum lycopersicum: Solyc09g009120.2.1
Sequences
CDS Sequence:
- >Phvul.001G186700.1|Phaseolus_vulgaris|C2H2|Phvul.001G186700.1
ATGAATATGGAGAGCACGCGCAGATCGTTGGATAGATCGAGAGAGCCGGGTCCCAAGAAGCCTCGATTGATCGAGGAACTCAGTGCCCGACAGTTACCTCAACGACAGCAAGGGTCTGGGGCAGTTGCTTCGGGGGTGTCTGCGAGGGTTAGGGTAAATGACAGGGACTCCGAAAGCAGCGATTTGGGTCGCGGCGGTGGGTACCACCCGCAGTCTCCCCCTCACGATGAGCTTGTGGCTCAGTATAGGACCGCGCTTGCTGAGCTTACTTTCAATTCGAAGCCGATAATTACGAACTTGACTATTATTGCCGGGGAGAACCAGTCTGCTGCCAAGGCAATTGCCGCCACTGTTTGTGCTAACATTATAGAGGTTCCAAGTGATCAAAAACTGCCATCCCTTTATCTCTTAGACAGTATTGTTAAGAACATCGGGCGGGATTATATAAAATATTTTGCTGTCAGACTACCTGAGGTATTCTGTAAGGCTTACAGACAGGTTGATCCTATTGTCCATTCAAGTATGAAACATCTTTTTGGAACTTGGAAAGGAGTCTTTCCTCCTCAGTGCCTTCAGATGATTGAGAAGGAACTTGGCTTTACACCTGCAGTCAATGGTTCAGCTTCGGTATCTGCTACAGTCAGGAGTGATTTGCAGTCACAACGCCCACCTCATAGTATCCATGTGAATCCCAAGTATTTAGAAAGGCAGCGTCTCCAACAGTCCAGTACGAGTAAAGGAGTTGTTGATGACATGACTGGAGCTTTGTTAAACTCAAACGAGGAGTCAGAGAGGCCAGAGAGAGTTTTGGGTGCTTCTCGACCATGGCTGGATCCTAGGATTAACATGCTTAATAATCAGCACGCACACAGAGATGCATTTAATGATTCTGTTCCTGAGAAGAGCATTGATGGATCATTTGGAGGCAGTCAATATGGTTCTGGCATTTCTAGTAATTTGGTCTCAGGGGCTGGAAGAACTGGAACTAAGCTCATTGATTTAGGGCACGAAAAAACATGGTTCAAAACAGATGGCAGTGAAGCAGAGACCATACCTGGGCAAAAAAATGGTTTCAGTCTCAAGCGTAGTTTTTCAAATCGTGAAGCACCAAAGTCCATTAATTTGGAAGCACATCGTCAGCCAAGACAAAGTATAACTAACATACGGAACAATGTGATGTCAGGTAACTGGAAAAATTCTGAAGAGGAGGAGTTCACGTGGGATGAGATGAACACTGGTTTGACTGATCATGGACCCAATGTGTCCAGCAATTTGAGCACGGATTCATGGATGACAGATGACGAAAATTTGGAAGGTGAAGATCACCTGCATATTCTACGCCCTTATGGGGCAAAGGTTGACAGGGAAATATCCACTGTTAAGAAACAACTGCCTGGGTTTGGTGGCCATCCACCTTCATCATGGCAATTGCAGAAGCACCACACAATTGATAAGTTGAATCTGAAGCCAGGTTACTCAGATGGATTTGTGTCCACTATTAGTGGCTTACCAGCCAACGCAAATTCTTTACCTGTCAAGAAGGGGAACCAATCTTTTACGTCAAAGGCAGTAGTAGGAATGGCAAAAATTGTAGGGCAGCAATTTGATGGGGAGATTGAATCCCCGTCTGGGCAATCACCTTTGCAACGACAGTCTCCATCACTGCCAGGAACAGCATACCACCCTCATTCAATGCAAAATTTGCCCGAGCAAGAAATGCCCCAGAATATTAGAACATCTCAATTTTCGGGAGGTCCAACAAGTCAGCACATTAGAGATCGCTCACCTACCCTTCATCCCATTGTTCAGGTTGGTAACATGCGAAGAACACAGGAAAAGGACATGCAGGGCCCATTATCTTCTGCAACTAAGCTTCAGCAACAGCAGCTCGACTTTTCTCAGACTGAAGTTTCTGCTAAAACTAAGCTGCCCCAGTCTAAAACTTCTTTAACCAAAGAAGTTTCAGAACAGTCAACCAAAAATAATTTGTCATCTGCAGCTGTGAAGAGTGGAATCATCCCCAAGAAATCAATTACCAGTAATCTGGATCCAAGGAAGCATCTATCCAAGTCCGGGGTTCAGCTTCCTCGGTCTGGTAGGTCTTCTCCTACCACAATAATTTCTTCAGGGTCTGCAGTGGCATCACCATCTTTATTAGATCCTCTGCATAAAGATTCGTCTTCAGTGCCAAAAAAACCCCAAGGAAAGGCTGGACAACCACCACAAAAGCTTTCTACTCAACCACCCGCTTCTTCTAATTTGAATGCTGCCAAAAATAATGTAAATCCTATCGCAAACCTTTTAAGCTCATTAGTTGCAAAGGGTTTGATATCTGCAGAAACAGAATCACCGACTATGGTACCAAGCGAACCAAGCGAAGTGCTGAAGGGATCCAAAGATAAAGCTGCAAACATTAGCACCAGTAGCTCAATCCCAGTTACATCAGTTTCTGATTCTGCAGCTGTCCCAGTATCATCTGCCAGAGATGAGGTTGACGCTGCAACAAAATCCTCTCTTCCCTCGGCTCAATCTACTAGCACAAAAATCAGAAATCTCATTGGCTTTGATTTTAAACCTAATGTAATTAGAGAATACCATGAACCGGTTATTAGGGAATTATTGGATGATTTCCCTCATCATTGCAAAATTTGCGGTATTAGGTTTAAACAAGAAGAACAGTATCAGAGACACTTGGAGTGGCATGCCACAAGAGAACATGGTCCAATTAAAGTATCCAGAAGTTGGTATCCTAAGTCAGGTGATTGGATTGCTGGCAAGGTAGAAGAATATTCATCTGAGTTTGAGTTTGCTGACTCGGCTGTTGTAGACAACCAAGAAACAGACAGCAGTCAATTGGATATGATGATTCGAGCAGATGAAAATCAGTGTTTGTGTGTATTGTGTGGCGAGCTATTTGAAGATGTGTACTGTGAAGAAAGGAACGAGTGGATGTTCAAAGGGGCCGTTAATATGAACTACTCGGATATCAATAGTGAGATGGAAAGTAGAAATGCGGGTCCCATCATTCATGCCAAATGCTTATCCGAGAACTCAATTGTCACCAATTTGGATAATGATTAA
Protein Sequence:
- >Phvul.001G186700.1|Phaseolus_vulgaris|C2H2|Phvul.001G186700.1
MNMESTRRSLDRSREPGPKKPRLIEELSARQLPQRQQGSGAVASGVSARVRVNDRDSESSDLGRGGGYHPQSPPHDELVAQYRTALAELTFNSKPIITNLTIIAGENQSAAKAIAATVCANIIEVPSDQKLPSLYLLDSIVKNIGRDYIKYFAVRLPEVFCKAYRQVDPIVHSSMKHLFGTWKGVFPPQCLQMIEKELGFTPAVNGSASVSATVRSDLQSQRPPHSIHVNPKYLERQRLQQSSTSKGVVDDMTGALLNSNEESERPERVLGASRPWLDPRINMLNNQHAHRDAFNDSVPEKSIDGSFGGSQYGSGISSNLVSGAGRTGTKLIDLGHEKTWFKTDGSEAETIPGQKNGFSLKRSFSNREAPKSINLEAHRQPRQSITNIRNNVMSGNWKNSEEEEFTWDEMNTGLTDHGPNVSSNLSTDSWMTDDENLEGEDHLHILRPYGAKVDREISTVKKQLPGFGGHPPSSWQLQKHHTIDKLNLKPGYSDGFVSTISGLPANANSLPVKKGNQSFTSKAVVGMAKIVGQQFDGEIESPSGQSPLQRQSPSLPGTAYHPHSMQNLPEQEMPQNIRTSQFSGGPTSQHIRDRSPTLHPIVQVGNMRRTQEKDMQGPLSSATKLQQQQLDFSQTEVSAKTKLPQSKTSLTKEVSEQSTKNNLSSAAVKSGIIPKKSITSNLDPRKHLSKSGVQLPRSGRSSPTTIISSGSAVASPSLLDPLHKDSSSVPKKPQGKAGQPPQKLSTQPPASSNLNAAKNNVNPIANLLSSLVAKGLISAETESPTMVPSEPSEVLKGSKDKAANISTSSSIPVTSVSDSAAVPVSSARDEVDAATKSSLPSAQSTSTKIRNLIGFDFKPNVIREYHEPVIRELLDDFPHHCKICGIRFKQEEQYQRHLEWHATREHGPIKVSRSWYPKSGDWIAGKVEEYSSEFEFADSAVVDNQETDSSQLDMMIRADENQCLCVLCGELFEDVYCEERNEWMFKGAVNMNYSDINSEMESRNAGPIIHAKCLSENSIVTNLDND*