Information report for PH01000440G0880
Gene Details
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Functional Annotation
- Refseq: XP_003561328.1 — uncharacterized protein LOC100824150 isoform X1
- TrEMBL: I1H2X2 — I1H2X2_BRADI; Uncharacterized protein
- STRING: BRADI1G54900.1 — (Brachypodium distachyon)
- GO:0006281 — Biological Process — DNA repair
- GO:0003677 — Molecular Function — DNA binding
- GO:0005524 — Molecular Function — ATP binding
- GO:0008094 — Molecular Function — DNA-dependent ATPase activity
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >PH01000440G0880|Phyllostachys_heterocycla|C2H2|PH01000440G0880
ATGCTCCCCTCGCCCTCCTCCCTCCGCTCCCTCCTCCACCTCTCTCGCCGCCTCCATTTCCACCGCCTCCGCGCCCCAAACCCTCGCCTCCCTAGCCCCCCGCTCCTCGCCCACCTCCGCCTCCTCTCCTCCTCCTCCTCGTCTCCATCCGGCGGCGCCGGATGGGCCGCTTACGACCCCCTCACCGACAGCCTCACCCCATCGGCGGCAATCTCTTCGACCTCCTCCTCCTCCTCCGCCGCCTCCGACCCCGAGACCCCCGCGGACTCCGACGTCTGGGGCGTGTTCGACCCCGTCGCCGGGCGCATCGTCATGCAGGGGCAGCCCTACCCGCCGCCCCCTCCTTCGTCCAACTCGGAGGAGGAGAAGGAGAGCGTGGAAGAGAAGGAGGTCATCAGGGAAAAGGGGAAATCGAGCGGCGGGAAGGGCCAGGCCAAGTGGTCGGCGGTGGCCGCGGCGAGGAAGGTCGGGGGGAAGGCGGCCAAGGAGAAGGTCTCGTACGTCTGCAGCCATTGCGGGGAGGGCTTTTCGCAGTGGTGGGGTGTATGCCGCCACTGCCAGGCGATGGGGACCCTGGCCAAGTATGTCGCGGAGGGGTCGCACGACCACGCGGTCCGGTCGTGGATTCCGCAAAAGAGCAAGGAGATGATGCCCCAGAGCCTTCAGGAGGTGACCAAGGGGTTCGACCAGGCGGAGTGGCGCATAACGCTGCCAGGGAGCTTCGGCATGGAGATCGCTCGGGTGCTTGGGGGTGGCATTGTTCCTGGCTCATTGGTTTTAGTAGGTGGGGATCCAGGTGTTGGCAAAAGTTCATTGTTGTTACAGCTCGCTTCTGTGGTATCTGAGGGCTTCAAGGTTGAGGATTCTTCTCCTGTTGTATATGTGTCTGGTGAGGAGAGCATTGCACAAATTGGAAATAGGGCTGACCGGATGAGTATCAAGTCTAGAAACTTGTACCTATACTCTAGTACGGATATTGAGGATATCTTGGACAAAATCCAGCCATTATCTCCAAGAGCTGTTATTGTTGATTCAATTCAGACAGTTTACCTGAGAGCATTTGCTGGAAGTGCTGGGAACACAATGCAGCTTGATTTGATAGCTCTCACTATTCATGCCGGTTTCATCATCTTCTTCGTTGTGATGCTGCGGTCGACTTTGCTCCCGCTTGCCTGTACTTTCTCATCCCCTGCACCTTGCGCTCTATTGGCATTCGCCATGGTTATTAAGGCGGTCAAGGAATGCACCTCTGCCTTGTTAAGATTTGCAAAACTGACAAATATCCCTGTTTTCTTGATTGGACATGTTACAAAAACTGGTGATATTGCTGGCCCTCGTCTTTTAGAGCACATAGTGGATGTTGTTTTATATATGGAGGGAGAGAGATGCTCATCTCATCGACTGCTGCGGTCGGTGAAGAATCGTTTCGGTTCAACGGATGAGCTTGGTGTATTTGAAATGTCAGAACATGGTCTGCAAGCTGTTCTGAATCCTAGCGAGATGTTCTTAACTGAACATGATTCAGATTCTGAAATACTAGCTGGGCTTGCTGTAGCTGTTATTTTGGATGGATCCAGGACCTTTGCTATTGAAGTTCAGGCATTGTGTGTTTCTGGTTCTCCTCGCAATGGACAAGTAGTTGGCATACCGACAAGCAGGGCTGATGTGATAATCTCAGTTCTTATGAAGCAAGCAGGTCTAAAACTTGATGACAATGCTATTTTTCTGAATGTGGTCAGTGGCTTCAAGTTGACAGAGACCGCAGGAGATCTGGCCATAGCAGCTTCAATTTGCAGCAGTTTCTTGGAATTTCCTATCCCAAATGACATTGCATTTATTGGCGAGGTCGGCCTTGGTGGTGAACTTAGAACTGTGCCAAGAATGGATAAGCGGGTGATGGCTATTGCGAAGTTGGGATACAAGAAATGCGTCGTTCCCAAGACTTCAGAAAAGCTGCTCAAACCGCTTAATCTTGATATTGAGATTTTGCCCTGCAGCAACCTGAAGCAGGTCATAAACACAATATTTAGGCCCCAAGGATGA
Protein Sequence:
- >PH01000440G0880|Phyllostachys_heterocycla|C2H2|PH01000440G0880
MLPSPSSLRSLLHLSRRLHFHRLRAPNPRLPSPPLLAHLRLLSSSSSSPSGGAGWAAYDPLTDSLTPSAAISSTSSSSSAASDPETPADSDVWGVFDPVAGRIVMQGQPYPPPPPSSNSEEEKESVEEKEVIREKGKSSGGKGQAKWSAVAAARKVGGKAAKEKVSYVCSHCGEGFSQWWGVCRHCQAMGTLAKYVAEGSHDHAVRSWIPQKSKEMMPQSLQEVTKGFDQAEWRITLPGSFGMEIARVLGGGIVPGSLVLVGGDPGVGKSSLLLQLASVVSEGFKVEDSSPVVYVSGEESIAQIGNRADRMSIKSRNLYLYSSTDIEDILDKIQPLSPRAVIVDSIQTVYLRAFAGSAGNTMQLDLIALTIHAGFIIFFVVMLRSTLLPLACTFSSPAPCALLAFAMVIKAVKECTSALLRFAKLTNIPVFLIGHVTKTGDIAGPRLLEHIVDVVLYMEGERCSSHRLLRSVKNRFGSTDELGVFEMSEHGLQAVLNPSEMFLTEHDSDSEILAGLAVAVILDGSRTFAIEVQALCVSGSPRNGQVVGIPTSRADVIISVLMKQAGLKLDDNAIFLNVVSGFKLTETAGDLAIAASICSSFLEFPIPNDIAFIGEVGLGGELRTVPRMDKRVMAIAKLGYKKCVVPKTSEKLLKPLNLDIEILPCSNLKQVINTIFRPQG*