Gene Details:

  • Gene ID: PGSC0003DMP400012061
  • Gene Family: C2H2 family
  • Description: C2H2 family protein
  • Species: Solanum tuberosum
  • Source: C2H2 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_006345504.1  — PREDICTED: zinc finger protein WIP2-like
  • Swissprot:  Q9SVY1  — ZWIP2_ARATH; Zinc finger protein WIP2
  • TrEMBL:  A0A3Q7EIT5  — A0A3Q7EIT5_SOLLC; Uncharacterized protein
  • TrEMBL:  M1A931  — M1A931_SOLTU; Uncharacterized protein
  • STRING:  Solyc01g087050.2.1  — (Solanum lycopersicum)
  • STRING:  PGSC0003DMT400017556  — (Solanum tuberosum)

Gene Ontology:

  • GO:0003676  — Molecular Function — nucleic acid binding

Family Introduction:

  • Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.

Literature:

Sequences:

CDS Sequence:
  • >PGSC0003DMP400012061|Solanum_tuberosum|C2H2|PGSC0003DMP400012061
    ATGCATATGTGGGGACATGGATCTCAATACAGAAAAGGTCCAGAATCTTTAAGAGGTACACAACCAAGTGCAATGCTAAGGCTACCATGTTACTGTTGTGCACCTGGTTGTAAACACAACATTGATCATCCAAGAGCAAGGCCATTAAAAGACTTTAGAACACTTCAAACACATTACAAGAGGAAGCATGGTGCTAAACCTTTCATGTGTAGAAAATGTGGTAAGCCATTTGCTGTGAAAGGTGATTGGAGAACTCATGAGAAGAATTGTGGTAAGATTTGGTATTGTATTTGTGGATCTGATTTTAAGCATAAGAGGTCTCTAAAAGATCATATTAAGTCATTTGGACGCGGTCATGGCGCGGTTGGGGTACCTAATCTTGAAGAACTAGAGGAAGAATCAACGTCCGAGATTGAACAAGATTTAATGTAA
Protein Sequence:
  • >PGSC0003DMP400012061|Solanum_tuberosum|C2H2|PGSC0003DMP400012061
    MHMWGHGSQYRKGPESLRGTQPSAMLRLPCYCCAPGCKHNIDHPRARPLKDFRTLQTHYKRKHGAKPFMCRKCGKPFAVKGDWRTHEKNCGKIWYCICGSDFKHKRSLKDHIKSFGRGHGAVGVPNLEELEEESTSEIEQDLM*