Information report for PEQU_21195
Gene Details
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Functional Annotation
- Refseq: XP_020573029.1 — probable lysine-specific demethylase ELF6 isoform X1
- Refseq: XP_020573030.1 — probable lysine-specific demethylase ELF6 isoform X2
- TrEMBL: A0A2I0VVB7 — A0A2I0VVB7_9ASPA; Putative lysine-specific demethylase ELF6
- STRING: AC149475.2_FGP005 — (Zea mays)
- GO:0009741 — Biological Process — response to brassinosteroid
- GO:0009826 — Biological Process — unidimensional cell growth
- GO:0033169 — Biological Process — histone H3-K9 demethylation
- GO:0048577 — Biological Process — negative regulation of short-day photoperiodism, flowering
- GO:0048579 — Biological Process — negative regulation of long-day photoperiodism, flowering
- GO:0005634 — Cellular Component — nucleus
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi1g74997.1.p, BRADI_1g74997v3
- Musa acuminata: Ma11_g01940, GSMUA_Achr11P02040_001
- Panicum virgatum: Pavir.9NG745400.1.p, Pavir.9KG592000.1.p
- Setaria italica: Seita.9G538300.1.p, SETIT_033886mg
- Setaria viridis: Sevir.9G542600.1.p, SEVIR_9G542600v2
- Zea mays: AC149475.2_FGP005
Sequences
CDS Sequence:
- >PEQU_21195|Phalaenopsis_equestris|C2H2|PEQU_21195
GAAGGGGATGTTCCGCTCTGGCTGAAGAATCTCCCCATGGCGCCGGAGTACCGGCCCACTGAGACCGAGTTCGCTGATCCCATTGCGTTCATCTCCCGCATCGAACGCGAGGCCGCCGCTTTCGGGATTTGCAAGGTCATACCGCCGCTCCCGAAACCGTCCAAGAGGTTCGTACTCTCTAATCTTAACCGCTCCCTTTCCAAGTCTCCTGAACTCGGCGACGCTGCCGCTGGGACTGCGGGTCCTTCGCCAGAGTCTGCTGTCTTCACTACTAGGCACCAGGAGCTCGGGTCCAGACGTGCCCGACCCGCTGCCCTCCCCAAGCAAGTATGGCAGAGTGGGGATGTTTATACACTGGAGCAATTTGAGGGCAAATCCAAGGCCTTTGCCCGCTCGCACCTTGGTGGCTTCAAGGAGGTGACCCCCTTGCTAGTGGAATCGCTTTTCTGGAAGGCGGTGATGGAGAAGCCCATCAACATTGAGTACGCTAACGATGTCCCGGGTTCTGGCTTTGCTGTGCCAGAGGAGCCTTTTCGGTTGACGAGTTCCAGCGATAATGGACAGCCAAAGAGAAGTTGGGGATCGTGTGGCGACAAGGAGGGATGGAAGGGGACTTCTGGGTGGAAGCTATCAAACAGCCGCTGGAACTTGCAGGTAATTGCTCGTTCCCCGGGATCCTTGACACGCTTTATGCCGGATGATGTGCCGGGAGTTACGTCTCCCATGGTTTATATTGGCATGCTCTTCAGTTGGTTTGCTTGGCATGTGGAGGATCATGAGTTACATAGCATGAATTACCTTCACATGGGCTCCCCAAAGACATGGTATGCCGTTCCTCAGGATCATGCGGCCACTCTGGAGGAGATTGTTAGGTGCCATGGTTATGGCGGCAGTGTTGATAGGCTAGTAGTGGCTCCTCCTCATTCTTGCCTAATGGTGACCAAAGCACAGGTGGAAGCTTGTATGGGGGGAATGGGAATAGTTCACAACAAATTTCATAGCATAATTTTTACTAATGGTTTTGAACTTTTATGTTGGCACTTCATGTATTCATTCATTTTCATGTGGCATCAATTTTTTCTTGCTTTATTTTTTTTTTCTGTATTGATTTGGATCTGTGGATACTCAGGATTTAATTGTGGGGAGGCTGCTAATTTTGCGACTCCTGAATGGTTAAAGGTGGCTAAAGAAGCAGCAATAAGAAGGGCAGCCATGAATCATCTTCCAATGCTATCTCATCAACAGCTTCTGTACATTTTGACAATGTCGTTTGTCTCACGAATTCCTAGGACATTAATCTCAGGTGTACGGAGTTCACGTTTGAAAGACCGTAAGAAAGAAGAAAGAGAAATTCTTGTCAAGAAGGCATTTTTGACTGATATGATGAGTGAAAACTATCTGTTGTGTGTTCTCCTTGAGAAAAAATCTATTTCTCCAATTCTGTGGGAACCTTATATGTTACCCGCCTCATGTGCTGTTTCCCAGTGTTGTCCTTCCATATCGCTCAAGGCACAGACCTTTGATAATCAAAATGGATGCTGCATCTACAATCAACAGAAAGAAATCAGTACCCATGAAGAAATTTCAAAAAAAGTTGATGATTTTTGTGTAAAAAAACCATTTGATGAAGCAATTGCTTTGAATGCATGTCCTGATATTTTGCTTACTGAGCCTTACAAGGATCAGATCCATCTTGATCTCCCAGCTTCTGATGTGGAAGCACTGGAAATTGCTGAGGATGAGGATGAGTTGCCTGTTGGTTTGAGCGTTGATTCAGGGTCATTGGCATGTGTTGCATGTGGAACTCTTGGCTATCCATTTATGGCCGTCATTCAACCTTCTGTAAAAGCAGCAAAGAGGATTTTTTCCATTACTTGTGAAGAACCTAATGAGAAGTCTGACAAATCATGGTGCTTGATTTCGCCTCCTTGTGTTCAGAATGATCCTTGTAACTTTACTACAGGGAATCTTGATCCAAGTTGGCAATTGTTTCCAAAATCAAGCGAAACTATGCAACATTTCAGGGAGCATGATATGCCTCTTCCTATGGATAACGGTTCTTCTCTCAATTATTTCTCTATGGATTCTTTGCAAAATAAGGGAGAAACATTAGACGCAACAGATTCTCAAACCAAGAGCAATAGATGTGTTTTTGACAGTTCTGCCAATACATTTTGTTCCAGTGGCTTGCATCCTTGTGGAAATGTGAAAGAATTTGAGGGGATTTTGGGCACGAAGAATGGCTCTGGGCCTTTTTTTGAAGGTGACGAAGAATCGCATGTTAAAGGAAATGTGGGTGTACCAAAGTGGGATGTGTCTAATGTACTTCTCAGACCGAGGGTTTTTTGCTTGAACCATGCTATTGAGGTTGAGGAACTTTTGCAAAACAAGGGTGGAGGACTTATGCGCATTACATGCCATTCAGATTATCTGAAGTTCAAAGCTTATGCTGCATCTATTGCTGAAGAAATGGGCACTGAGCTCCACTTAAAAGATGTTCCTCTTGAAAATGCATCCCAGGAAGATCTTAATCTAATTAATATTTCTATTGATGAAGAAGAACATCAGGAAGATGGCAAAGATTGGACCTCAAAGTTGGGCGTGAATCTAAGGTACTCTGTCAAGCTTAGAAAACATTCAGCATCTCCTCAAGAACAGCTACCATCAGCTCTTCAGCGAATGTTTTCAAATCCCTCAACTGTTTCGGTTGTCTCAAACCTTAAATGGCTTTGCCGGAAGTCTCGCACACCTGCCAAGCCATTGGGCATCAATGTTGTCAAACCACGGATTTCAGCCACTGTGGAGCGAGGGGTTCAAACTTTTAAAGTGGCAGGTAATGACAATATAAAAGCCATCCAGGTTTACCAGAGCCGGAAGAAGAAAACAAATTATCTGCCTTCTGATGATCACAATCATCCAGGAAAAGAGCTCAGCAGTTGCAACCAAAATTCAAAATTTGTTAGAAGTGAAAATGTTGAAAACTTGTTCACTGTCCCCATTTCTATGATTGAAAATCATGAAATTTCTCAAAATAGCATAGAGAAAAGGAATAGAAGTCCATCAGTTGCTGATATTAGCACAACGAACTTGAGTTGTTTTCATTTGCCCGCCAAGCCGTCTACAGAATCTCATGGCGTTAATGATCGTTGCTTCTCTGGGTTGAATGGATTAAATAATACGACGTTTGTTTCTGTTCCTGTTAATTATCAGTCTAATCAGGTCTACAACAATGCCTTCACATCTATTAGCTCAGTACCGTATGAAGAAAAAAATGCTGGAGAATCTTCCGCCAATTTTGATGGTGGGAGACACGGGAATTTAGAGTTGCAGGACAACACGGTTATTAGAGAATCTAGAAGTTCTGAGACAAACGTGGTGATAGCTCTATGTGAAGGAGAGCGATGCGGCATCATATCGACGGAAGGCGAAATGGATAAAACTGCAAATCGAGCTGTTAGGGAGAGCATGTTGGAAGGTGAACTCATTCACATTTGTTCAAAAACCCCGCTTCTTATGCACGAATGTGCAGTTGATAATTGCAAACCGCAGCATGAACCATGCACGACAAAAGCAGCTGATTTTTTTCCATTTGCTTTGAATATTAAATCTTATGTGCGACGAAAGAACAAACGGAAATGGGAAGTAGAACAACGAGTATCAGAAGAACACATTGAGCCAGAAAACACAGCAACAGTGCAGAACAAATTAAAAATTTATAACAAAACTGAAGGTCAACAAACCAGTAATGGTTTTGCCCGGAGTCCATGCGAAGGCTTAAGACCAAGGAAGGGAAAATTAGAGTCTTTTGTGGCTGAACCTAAAATTTCTGACACAAGAAAACAATCCGAGGTGAAAGATGCCTTTGAGTGCAATATTGAAGGCTGTCACATGGTGTTTAGGACACGATCCAAGTTACGACTCCATAAGCAGAACCGTTGCACATACGACGAATGTCGAAAGAGGTTCAGCCATCACAAGTATGCGATGCGGCACCAGCGCGTGCACAAAGACGAACGGCCTTTCAGGTGCTCGTGGAGAGGATGTAAAATGTCGTTCAAGTGGGAATGGGCGAGGACGGAGCACCTTCGTCTCCACACAGGCGAGAGGCCTTATAAGTGCTTTGTTGCTGGTTGCGGGCTATCTTTTAGGTTTGTTTCTGATTTTAGTCGGCACAGAAGGAAAAGTGGGCATTTT
Protein Sequence:
- >PEQU_21195|Phalaenopsis_equestris|C2H2|PEQU_21195
EGDVPLWLKNLPMAPEYRPTETEFADPIAFISRIEREAAAFGICKVIPPLPKPSKRFVLSNLNRSLSKSPELGDAAAGTAGPSPESAVFTTRHQELGSRRARPAALPKQVWQSGDVYTLEQFEGKSKAFARSHLGGFKEVTPLLVESLFWKAVMEKPINIEYANDVPGSGFAVPEEPFRLTSSSDNGQPKRSWGSCGDKEGWKGTSGWKLSNSRWNLQVIARSPGSLTRFMPDDVPGVTSPMVYIGMLFSWFAWHVEDHELHSMNYLHMGSPKTWYAVPQDHAATLEEIVRCHGYGGSVDRLVVAPPHSCLMVTKAQVEACMGGMGIVHNKFHSIIFTNGFELLCWHFMYSFIFMWHQFFLALFFFSVLIWICGYSGFNCGEAANFATPEWLKVAKEAAIRRAAMNHLPMLSHQQLLYILTMSFVSRIPRTLISGVRSSRLKDRKKEEREILVKKAFLTDMMSENYLLCVLLEKKSISPILWEPYMLPASCAVSQCCPSISLKAQTFDNQNGCCIYNQQKEISTHEEISKKVDDFCVKKPFDEAIALNACPDILLTEPYKDQIHLDLPASDVEALEIAEDEDELPVGLSVDSGSLACVACGTLGYPFMAVIQPSVKAAKRIFSITCEEPNEKSDKSWCLISPPCVQNDPCNFTTGNLDPSWQLFPKSSETMQHFREHDMPLPMDNGSSLNYFSMDSLQNKGETLDATDSQTKSNRCVFDSSANTFCSSGLHPCGNVKEFEGILGTKNGSGPFFEGDEESHVKGNVGVPKWDVSNVLLRPRVFCLNHAIEVEELLQNKGGGLMRITCHSDYLKFKAYAASIAEEMGTELHLKDVPLENASQEDLNLINISIDEEEHQEDGKDWTSKLGVNLRYSVKLRKHSASPQEQLPSALQRMFSNPSTVSVVSNLKWLCRKSRTPAKPLGINVVKPRISATVERGVQTFKVAGNDNIKAIQVYQSRKKKTNYLPSDDHNHPGKELSSCNQNSKFVRSENVENLFTVPISMIENHEISQNSIEKRNRSPSVADISTTNLSCFHLPAKPSTESHGVNDRCFSGLNGLNNTTFVSVPVNYQSNQVYNNAFTSISSVPYEEKNAGESSANFDGGRHGNLELQDNTVIRESRSSETNVVIALCEGERCGIISTEGEMDKTANRAVRESMLEGELIHICSKTPLLMHECAVDNCKPQHEPCTTKAADFFPFALNIKSYVRRKNKRKWEVEQRVSEEHIEPENTATVQNKLKIYNKTEGQQTSNGFARSPCEGLRPRKGKLESFVAEPKISDTRKQSEVKDAFECNIEGCHMVFRTRSKLRLHKQNRCTYDECRKRFSHHKYAMRHQRVHKDERPFRCSWRGCKMSFKWEWARTEHLRLHTGERPYKCFVAGCGLSFRFVSDFSRHRRKSGHF