Information report for ORUFI12G18660.1
Gene Details
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Functional Annotation
- Refseq: XP_015619352.1 — uncharacterized protein LOC4352629
- Refseq: XP_015619353.1 — uncharacterized protein LOC4352629
- TrEMBL: A0A0E0RJ60 — A0A0E0RJ60_ORYRU; Uncharacterized protein
- STRING: ORUFI12G18660.2 — (Oryza rufipogon)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Setaria italica: Seita.3G365300.1.p
- Triticum aestivum: Traes_5BS_CD57D000A.1, Traes_1AS_CD57D000A.1, Traes_5DS_818C09355.1
Sequences
CDS Sequence:
- >ORUFI12G18660.1|Oryza_rufipogon|C2H2|ORUFI12G18660.1
ATGGCACCAAGAGGAAAGCCTTGGAAGCATTGTTGCAACAAGTGCGACAAGAGCTTCCGTTCAGGGAATGCTCTTGGAGGCCACATGTCCTGCCACAGGAGTGTTGAAACACAATGCCAGATGTGCTCAAAGGTGTTCTCCACCTCCGGATCGCTGAGGGAGCACATGATGATGCACGGTGGGGAGAAGGTGGTGGTCAAGGCTGAGGAAGAAGCTGCCGGGCTGATTGAAGCACTGGGCATTGCTGATAGCATGCAAGATGTAATGGTGTTTTCTTCAGTGAAGCGTAAGCGATCATTCCGATCAAAGAGGCAGACACCAGCACTCAGTTTGGAGGAGATAGAGGCTGCAGATGCTCTCCTACTGCTTTCAGGGTGCTTTGACAAGACTTCAGCTTATGAGGATTGCTATCTGGGAGATATAGAAGACAGTAGCTTGAGATCCATTGTGCTGACAGAGGTTAACATGAATGCCGTGGATCGTTGTTCGGTTCGATCTGTTGGCTCCAAGGAGCCAATAAATGATAATAACTCAGGTTACAAGGATTGCTATGGACAAAGTGACAAGGAAAACTGTTTGATCGTTCCCAAGGAGGAGATGGATCCAAATGATTTTGATCATGAGCTGGTTAGAGATGCTGCTCTCAGGAAACCAAGAACCGACAATTCAGATGAGGAGATGAAGTTTGGTGATCTTCCAGCTGCTGCTATGAAGGACAACAGCCACCGTTGCAATACCTGCGGAAAGTCATTTGGATCAGGGCAGGCACTGGGAGGCCACATGCGACGTCATTATGTTCGGAAGTGCAATCGTCAACGGGGGGTTGCTGACCACGCTGGTTCTGTTCTTATGAAAGTGCAAAAGCTGAAGCTTAGATTGGACCCCATCTTGTTTGATGTCACACTTCCAGCTCTCACTGATGGAGACTGCTGCATTTCTGTGGGTGTGAAGCCTGAACCTCAGCTGTGGTGTGTCACGAGCAATCTTCACCGTCCGATCATGACACGTGTCCTCATCCTGCGCCTCACCACGAACCCCCTCTTCTTCCCCGATGCGTCTCTCTCTCCCCTCCTCTCTCCGCTTCCGCAACCAAAACCTCCACAGCTCGCCGCGGCGCTGGCGCGGCCGCGCAGGATGAACCTAGGACGCGAAATGGCTTCTGATGTTCCTCAAGATGACGTGCAATGCCATTTTTGTGGCACCTACTTAAGGCCAAGAAGTTTTAGGAAGCATCAGCAGCGTTGCAAGTACAATCCGGATGCGCTTACGCGACAGAATTTGTCCGCAAGTTCGATACCAACATCTGCTACAAGAGCGACGCATTCAGAAATGGCTTCTGATGTTCCTCAAGGTTACGTGCAATGTCATTTTTGTGACACCTACTTAAGGCCAAGAAGTTTAAGGAAGCATCAGCAGCGTTGCATGTACAATCCGGATGCGCTTACGCGACAGAATTTGTCCGCAAGTTCGATACCAACATCTGCTAGAAGAGCGACGCATTCAGAAATGGCTTCTGATGGTCCTCAAGAGAACTGTCAGTGCAGTTTTTGTCACAAGGACTTCGAGGGTAGAAGTTCTTGTGCAGAGCATGAGCTGCAGTGCAAGAACAATCCCGACGTGCATTCGCAAACAGAACCTTCAGGCAATGCTCAGGGTGGCATAGGCAGCTTGGATGTTCATGTACCAAGGCGAAAGCGAACAGCCAGAAATCAGCCGCTGCCAGAACAACATCTGAAGAAGCCAGCTTCTGATTATGCTCAGGGTGGCACCAGTGATGCACCAGAGACTCCACCGAAGCCAACAACAAGTGAAGTGAAAGTGGATTCTGCTGTCAATGCTCCTGATATCACTATTCCTGACAACAAAGATCCTTCTGTGATGCAGAAACAAAAGAAGAAGCTTGATCTCAATCTGCAACCTCACAGTGACAGTTCAGATCAGGAGGAACAGGCCGACAATTTCAGCTCTATCAATGATCTCAGTACAATTGATACAAATTCAGACAAGAAGAAAAATACCATCACTGGTGTTGCTGATACCAATATTCCTGACCACAAAGATCCTTCTAGGATGCAGATGCAAATCAAGCTTGATCTCAATCTGCCACCTCACGACGACAGTTCCAGCTCTATGGATGATCTCAAAACTCTGGCTCCCACTGATACCAATTCAGATAAGGAGACGAACACCGGCAATGGTGGTGTTGATACCAATATTCCTGACCACAGTGATCCTTCTGCGATGCAGACGAAAAACAAGCTTGATTTCAATCTTCCGCCTCGCAATGACAGTTCAGATTCATTAGTCTGA
Protein Sequence:
- >ORUFI12G18660.1|Oryza_rufipogon|C2H2|ORUFI12G18660.1
MAPRGKPWKHCCNKCDKSFRSGNALGGHMSCHRSVETQCQMCSKVFSTSGSLREHMMMHGGEKVVVKAEEEAAGLIEALGIADSMQDVMVFSSVKRKRSFRSKRQTPALSLEEIEAADALLLLSGCFDKTSAYEDCYLGDIEDSSLRSIVLTEVNMNAVDRCSVRSVGSKEPINDNNSGYKDCYGQSDKENCLIVPKEEMDPNDFDHELVRDAALRKPRTDNSDEEMKFGDLPAAAMKDNSHRCNTCGKSFGSGQALGGHMRRHYVRKCNRQRGVADHAGSVLMKVQKLKLRLDPILFDVTLPALTDGDCCISVGVKPEPQLWCVTSNLHRPIMTRVLILRLTTNPLFFPDASLSPLLSPLPQPKPPQLAAALARPRRMNLGREMASDVPQDDVQCHFCGTYLRPRSFRKHQQRCKYNPDALTRQNLSASSIPTSATRATHSEMASDVPQGYVQCHFCDTYLRPRSLRKHQQRCMYNPDALTRQNLSASSIPTSARRATHSEMASDGPQENCQCSFCHKDFEGRSSCAEHELQCKNNPDVHSQTEPSGNAQGGIGSLDVHVPRRKRTARNQPLPEQHLKKPASDYAQGGTSDAPETPPKPTTSEVKVDSAVNAPDITIPDNKDPSVMQKQKKKLDLNLQPHSDSSDQEEQADNFSSINDLSTIDTNSDKKKNTITGVADTNIPDHKDPSRMQMQIKLDLNLPPHDDSSSSMDDLKTLAPTDTNSDKETNTGNGGVDTNIPDHSDPSAMQTKNKLDFNLPPRNDSSDSLV