Information report for Oropetium_20150105_05613A
Gene Details
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Functional Annotation
- Refseq: XP_015611640.1 — uncharacterized protein LOC4347347
- TrEMBL: A0A0E0M2C1 — A0A0E0M2C1_ORYPU; Uncharacterized protein
- STRING: OPUNC09G12080.1 — (Oryza punctata)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Oropetium_20150105_05613A|Oropetium_thomaeum|C2H2|Oropetium_20150105_05613A
ATGGGCCCCAAAGGACATCAGTTCGCTACTTGCAAAGAAGTGTCTTCCTATCTCATGTCTGTTCTTGGATATCCAGAGGCAAAGCTAACCGCCATTCATAGTAACAATGCAACAGTGCAAGGCTTAAATTCTGTTAATTCTGTAGATCTTCAACAGAAAACTAGTCCAACTGAAGAAAAGCAAATTGCAATGCCGGTAACATTATTCAGTCACTCAGGTGATACTCATCATCAAAAGCTTCAGAAGGATGAAACTCGGATGGGAGAGAGTGCAAAGGAATGCCAGAAATGCAATTTGACCTTCAATGACCAGGGCGCTTACGTGCAACATCAGTTATCCTTTCATCAGAGAAGGGCTAAAAGGCGCAGGGTTAGTAAAGCCAATGAACTCGGCATTGGCATGGATGGAAAGTTTGAGACCCTGGAATGTCAGAAGACCTCCAAAGAGGGACCTGACAATTTCGGTCACTGTCTGGCTGATGTAAGCTATCAAGGACAGAGTGCAACAAACAAGTTTCATGGGTCTTTTTCAGGAGACTTAGGTGGTAAGTCATCAGTGGTTCCAGCGGAATATGGGCTTCAGCCAATGACTGCATTGCCTCAACGGGAAACAGAACCTTATGCTCAAGAGTCTAATACTGCATCTCTTGCTGTTGAAGCTGGAAGCAAGTTTAGTACTTGCAATTCTGCAAATATTCATGAGAATGACAGCTCAAAAAAAATAGAATGTCCCATCAGAGATTGTTCCCAGATTTCCTGTAACATACCTAAAGAGGTTTTTCCGACTGCAGATGGTCCTGATGAAACCAAATGCACAGATGATCCAGCGGGTTGTGCAGATAAAACACAATCCAAACAAGTTTCTGAGCCCTATGATCTACTGCACGGCAATTTTGGCAGTTCTCATGAAGAAAATAATTCTAATAACCAGCTGAAAAGTAAATCTCTTTCTGTAGCCTGTGATGAGCATGATCTTAATTCAGTTGATATGGAGGTAGATGGTGCTAATCTCGCTTGCAATGCAGTGCATCCTCCAAACATTAAAAATGAGAAATCTGTAGACGACAAGACTATGGATTCTGAAATGATCTCTTTGAAAAATGGTGAGATTAAAAACAGAATAAGGGATGTAAACCTCAATTCATTGGATACAATATCTTCTCCCGTTTCTGGTGGAAACTATGATACATCAAGTTGCATTGATGATGCCACTAGGTCATCTATTATTGCCCAATGCTTTGGTACTAGCTCTAATGATGACAATGCTTGTAAGGATGAAAACTTAGCGAACCAGAATAGATCTTCAAAGGGTGAAACTTTTGTCAACCAGAAAAATGACATGTTGTATCAATCTAATTTGACCATGGCCCCCACCCCTCCAGCTCAAATTAATGTGGATTGTTTCACTTCCGAAATCAAGAGCTATGGCAACAGAAGTGAAGATAATGGCAAAGAAGCACTGGTGAAGAACATGATGAGTCATGAAACAGGTTTTGATGTTGAAGCTTACAACAATGATATCTTCAATGGTACTATAACAGAAAGTAGCCTTGCCCAGCTCAATAATGCTATTAATATGAAAAATGATTTTGCAAACTGCTACTCATTATCTGATCTGAACACACTGACTGGTGGTACTGCCACTGATGAAATTGATATCCATGGTATGAGGAATTCGTTTGTTGGCTCCACCAGTCGTGAAGAACCAAACGAAAACTGCACACTGGATTTTGATATCAAGGGTTCTATGCTCGAAGCACTGGAAAAATCAGATAGTGACTTGGAAAATCAATACAGTGGTGCTGGTCCTACTTGTGATTCACTTCCTACAACTGGTACAAGCGGGAACATCGATGATTTTATGTCCATGCAATCTAATTTTGGTAGTTTTACGTCTTTGGTTCGTGCTGTTGAGGATGTTCCACTGAGCAGGATTATTCAGGATCAGTGTGATTTGCAACTTGGATTTGGAGGTCCAAAACAGCCTATGTATCCTAGCTTTGAGCAACAGCTTAGGATGGCCTCAGCTGGAGCTCCGCCATACGGGAGCATGAGCAGACATCAATCTATACCACAACAGGCTGACTCTCTTGGATACATCTGCCCGTCTTGCAAGGGGAAATTCTCGGGTCATCTTGGCATCAATGGGCCATCAATTTAA
Protein Sequence:
- >Oropetium_20150105_05613A|Oropetium_thomaeum|C2H2|Oropetium_20150105_05613A
MGPKGHQFATCKEVSSYLMSVLGYPEAKLTAIHSNNATVQGLNSVNSVDLQQKTSPTEEKQIAMPVTLFSHSGDTHHQKLQKDETRMGESAKECQKCNLTFNDQGAYVQHQLSFHQRRAKRRRVSKANELGIGMDGKFETLECQKTSKEGPDNFGHCLADVSYQGQSATNKFHGSFSGDLGGKSSVVPAEYGLQPMTALPQRETEPYAQESNTASLAVEAGSKFSTCNSANIHENDSSKKIECPIRDCSQISCNIPKEVFPTADGPDETKCTDDPAGCADKTQSKQVSEPYDLLHGNFGSSHEENNSNNQLKSKSLSVACDEHDLNSVDMEVDGANLACNAVHPPNIKNEKSVDDKTMDSEMISLKNGEIKNRIRDVNLNSLDTISSPVSGGNYDTSSCIDDATRSSIIAQCFGTSSNDDNACKDENLANQNRSSKGETFVNQKNDMLYQSNLTMAPTPPAQINVDCFTSEIKSYGNRSEDNGKEALVKNMMSHETGFDVEAYNNDIFNGTITESSLAQLNNAINMKNDFANCYSLSDLNTLTGGTATDEIDIHGMRNSFVGSTSREEPNENCTLDFDIKGSMLEALEKSDSDLENQYSGAGPTCDSLPTTGTSGNIDDFMSMQSNFGSFTSLVRAVEDVPLSRIIQDQCDLQLGFGGPKQPMYPSFEQQLRMASAGAPPYGSMSRHQSIPQQADSLGYICPSCKGKFSGHLGINGPSI*