Information report for ONIVA02G01060.2
Gene Details
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Functional Annotation
- Refseq: XP_025878917.1 — pentatricopeptide repeat-containing protein At2g22410, mitochondrial
- TrEMBL: A0A0E0G040 — A0A0E0G040_ORYNI; Uncharacterized protein
- STRING: ONIVA02G01060.2 — (Oryza nivara)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0005515 — Molecular Function — protein binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi3g01483.1.p
- Panicum virgatum: Pavir.1NG010700.1.p, Pavir.1KG020700.1.p
- Triticum aestivum: Traes_6DS_2B2F9C290.2, Traes_6AS_448C7608C.2, Traes_6BS_D373D1A96.2
Sequences
CDS Sequence:
- >ONIVA02G01060.2|Oryza_nivara|C2H2|ONIVA02G01060.2
ATGAATAGAAGCGTTTGCCACCACCTTCTCACCCAGTGCAAAACCATAAGAGAGCTCCAAAGAATCCACGCCCAGGCCCTCACACACGGCCTCCACCCCAACCAGCAGTCCATCTCCTGCAAAATCTTCCGGTCCTATGCCGAGTTTGGCCGACCGGCTGACGCAGGCAGGTTGTTTGATGAAATCCCCCACCCTGACATTATCTCCTTCACCAGCCTCATGTCCCTTCATCTCAAGTTAGATCACCACTGGAAAGCTATATCCGTGTTCTCTCACGCCATTGCTTCTGGCCACCGCCCTGATGGCTTTGCTGCTGTCGGTGCCCTCTCGGCCTCTGGTGGATTAGGGGATCAGCGTATTGGTAGCGTGGTGCATGGCCTGATTTTTCGGTGTGGGTTGGACTCTGAGTTGGTCGTTTGTAATGCTTTGGTTGATATGTATTGTCGATGTGGCAAGTTTGAGCCTGCACGGACTGTATTTGATAGAATGCTTGTAAAAGATGAGGTCACTTGGGGTAGCATGCTGTATGGTTACATGAAGTGTGTTGGTGTGGATTCAGCTTTGTCATTCTTTTATCAGATGCCTATGAAGAGCACTGTTTCTTGGACAGCACTGATCACTGGTCATGTTCAAGACAAGCAGCCTATCCAAGCTCTTGAGCTATTTGGTAAGATGCTTTTGGAGGGCCACCGTCCTAACCATATTACAATTGTAGGGGTGCTATCAGCTTGTGCTGATATTGGTGCTTTGGATCTTGGACGTGCCATTCATGGATATGGAAGCAAATCTAATGCCACCACCAATATAATTGTTACAAATGCTCTGATGGATATGTATGCAAAGAGTGGAAGCATTGCTAGTGCATTTTCTGTATTTGAAGAAGTTCAGATGAAGGACGCATTCACATGGACAACTATGATTTCAAGTTTCACTGTCCAGGGTAATGGGAGGAAAGCTGTTGAGCTCTTTTGGGATATGCTAAGGTCTGGGATACTTCCAAACAGTGTGACATTCGTCTCAGTTTTGTCAGCATGCAGCCATGCTGGGTTAATACAAGAAGGCAGAGAGTTATTTGATAAAATGCGTGAAGTCTACCATATTGATCCCCGGCTTGAGCACTATGGATGCATGGTTGATCTGTTAGGACGGGGTGGACTTCTAGAAGAAGCAGAAGCTCTGATAGATCATATGGATGTCGAGCCTGATATTGTTATTTGGAGGTCACTTCTTAGTGCATGCCTAGCTCATGGCAATGATAGATTAGCTGAGATTGCTGGAAAGGAAATTATAAAGAGAGAACCTGGGGATGATGGGGTCTATGTGCTTCTTTGGAACATGTATGCCTTATCAAACAGATGGAAAGAAGCTTTGGATATGAGGAAGCAGATGTTGAGTAGGAAAATATACAAAAAACCGGGTTGCAGTTGGATTGAAGTTGATGGTGTCGTCCATGAATTTTTGATGTGCTCTGGAGATGATATTGATGGAGACACGAGGGTTGAAGCAACACAACACAGGGATATAAGGCGCTACAAGTGTGAATTTTGCACGGTTGTTAGGTCCAAAAAATGTCTCATCCGAGCTCACATGGTTGCTCATCATAAGGAAGAACTGGACAAATCGGAAATCTACAAGTCAAATGGGGAAAAGGTTGTTCATGAAGGTGACCACACCTGCCAAGAGTGTGGTGCTTCTTTCCAGAAGCCAGCTCATCTGAAGCAGCATATGCAAAGTCACTCTGATGAGAGATCGTTCATTTGCCCACTTGAAGACTGCCCTTTCAGCTACATTAGGAAAGATCACTTGAACCGTCATATGCTTAAGCATCAAGGGAAGTTGTTTACCTGCTCTATGGATGGTTGTGGTAGGAAGTTCAGTATAAAGGCAAATATGCAAAGGCATGTAAAGGAAATCCATGAGGATGAAACTGCTACTAAAAGCAACCGGCAGTTTGTTTGCAAGGAGGAGGGCTGTAACAAGGTTTTCAAGTATGCTTCAAAGATGAAGAAACATGAAGAATCACATGTGAAATTGGACTACGTGGAAGTAGTCTGCTGTGAACCAGGCTGCATGAAGACATTCACAAATGTTGAATGTTTGAGGGCTCATAATCAGGCTTGCCATCAATATGTTCAGTGTGATATCTGTGGGGAAAAACACCTGAAGAAGAACATTAAAAGGCACCTACGAGCCCATGAGGTGCCATCTACTGAAAGGATAAAATGCAGTTTTGAGGGCTGTGAATGCTCTTTTTCCAATAAATCAAATTTAACTAAACATATAAAGGCGTCCCATGATCAAGTAAAACCTTTCGCATGTCGATTCACGGGGTGTGAAAAGGTGTTTCCATACAAGCATGTCAGGGACAACCATGAGAAATCCAGCGCTCATGTATACACTCAGGCAAACTTCACGGAGATGGACGAGCACTTACTCTCGTGTCCGAGAGGTGGACGGAAGAGGAAAGCTGTGACTGTCGAAACTCTTACGCGCAAGAGGGTGACCATGCACGGCGACGCTTCGTCGTTGGACAATGGAACTGAGTACCTGCGCTGGTTGCTTTCTGGTGGGGATGATGATTCGAGCCAAACTCATTAG
Protein Sequence:
- >ONIVA02G01060.2|Oryza_nivara|C2H2|ONIVA02G01060.2
MNRSVCHHLLTQCKTIRELQRIHAQALTHGLHPNQQSISCKIFRSYAEFGRPADAGRLFDEIPHPDIISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAEIAGKEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIEVDGVVHEFLMCSGDDIDGDTRVEATQHRDIRRYKCEFCTVVRSKKCLIRAHMVAHHKEELDKSEIYKSNGEKVVHEGDHTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKHQGKLFTCSMDGCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKHEESHVKLDYVEVVCCEPGCMKTFTNVECLRAHNQACHQYVQCDICGEKHLKKNIKRHLRAHEVPSTERIKCSFEGCECSFSNKSNLTKHIKASHDQVKPFACRFTGCEKVFPYKHVRDNHEKSSAHVYTQANFTEMDEHLLSCPRGGRKRKAVTVETLTRKRVTMHGDASSLDNGTEYLRWLLSGGDDDSSQTH