Information report for OMERI01G15790.2
Gene Details
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Functional Annotation
- TrEMBL: A0A0E0C2K9 — A0A0E0C2K9_9ORYZ; Uncharacterized protein
- STRING: ONIVA12G15190.1 — (Oryza nivara)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Hordeum vulgare: MLOC_75497.1
- Setaria italica: Seita.3G365300.1.p
- Setaria viridis: Sevir.3G382600.1.p
- Zea mays: GRMZM2G302891_P03
Sequences
CDS Sequence:
- >OMERI01G15790.2|Oryza_meridionalis|C2H2|OMERI01G15790.2
ATGGCACCAAGAGGAAAGCCTTGGAAGCATTGTTGCAACAAGTGCGACAAGAGCTTCCGTTCAGGGAATGCTCTTGGAGGCCACATGTCCTGCCACAGGCGTGTTGATAATCAGCCAAAGAGCACGTCAAGCCCGCCCACTGTTGTTGATCTGCACATGCCGCTGCTGAGTTCCTGTGATGATAATCTTTTGCTTTTGCCCCCAGAAACACAATGCCAGATGTGCTCAAAGGTGTTCTCCACCTCCGGATCGCTGAGGGAGCACATGATGATGCACGGTGGGGAGAAGGTGGTGGTCAAGGCTGAGGAAGAAGCTGCCGGGCTGATTGAAGCACTGGGCATTGCTGATAGCATGCAAGATGTAATGGTGTTTTCTTCAGTGAAGCGTAAGCGATCATTCCGATCAAAGAGGCAGACACCAGCACTCAATTTGGAGGAGATAGAGGCTGCAGATGCTCTCCTACTGCTTTCAGGTTGCTTTGACAAGACTTCAGCTTATGAAGATTGCTATCTGGGAGGTATAGAAGATGGTAGCTTGGGATCCATTGTGCTGACAGAGGTTAACATGAATGCTCTCGATCGTTGTTCGATTCGATCTGTTGATTCCAAGAAGCCAATAAATGATAATAACTCAGCTTATAAGGATTTCTATGGACAAAGTGACAAGGAAAACTGTTTGACTGTTCCCAAGGAGGAGATGGATCTGAATGATTTTGATCATGAGCTGGTTAGAGATGCTGCTCTCAGGAAACCAAGAACCGACAATTTAGATGAGGAGATGAAGTTTGGTGATCTTCCAGCTGCTGCTATGAAGGACAACAGCCACCGTTGCAATACCTGCGGAAAGTCATTTGGATCAGGGCAGGCACTGGGAGGCCACATGCGACGTCATTATGTTCGGAAGTGCAATCGTCACTGGGGGGTTGCTGACCGCGCTGGTTCTGTTCTTATGAAAGTGCAAAAGCTGAAGCTTAGATTGGACCCCATCTTGTTTGATGTCACACTTCCAGCTCTCACTGATGGAGACTGCTGCATTTCTGTGGAAATGGCTTCTGATGTTCCTCAAGATGACGTGCAATGCCATTTTTGTGGCACCTACTTAAGGCCAAGAAGTTTTAGGAAGCATCAGCAGCGTTGCAAGTACAATCCGGATGCGCTTACGCGACAGAATTTGTCGGCAAGTTCGATACCAGCATCTGCTACAAGAGCGACGCATTCAGAAATGGCTCCTGATGGTCCTCAAGAGAACTGTCAGTGCAGTTTTTGTCACAAGGATTTCGAGAGTAGACGTTCTTGTGCAGAGCATGAGCTGCAGTGCAAGAACAATCCCGACGTGCATTCGCAAACAGAACCTTCAGACAATGCTCAGGGTGGCATAGGCAGCTTGGATGTTCATGTACCAAGGCGAAAGCGAACAGCCAGAAATCAGCCGCTGCCAGAACAACATCTGAAGAAGCCATCTTCTGATTATGCTCAGGGTGGCACCAGTGATGCACCAGAGACTCCACCGAAGCCAACAACAAGTGAAGTGAAAGTGGATTCTGCTGTCAATGCTCCTGATATCACTATTCCTGACAACAAAGATCCTTCTGTGATGCAGAAGCAAAAGAAGAAGCTTGATCTCAATCTGCAACCCCACAGTGACAGTTCAGATCAGGAGGAACAGGCCGACAATTTCAGCTCTATCAATGATCTCAGTACAATTAATACAAATTCAGACAAGAAGAAAAAGACCATCACTGGTGTTGCTGATACCAATATTCCTGACCACAAAGATCCTTCTAGGATGCAGATGCAAATCAAGCTTGATCTCAATCTGCTGCCTCACGACGACAGTTTCAGCTCTATGGATGATCTCAATGCCCTGGTTCCCGCTGATACAAATTCAGACAAGGAGAAGAAGACTGATAATGGTGGTGTTCCCGCTGATGCAAATTCAGACAAGGAGAAGAGAACTGACAATGGTAGTGTTCCCACTGGTACAAACTCAATCAAGGAGAAGAAGACTGACAATGGTGGTGTTGATATCAATATTCCTGACCACAAAGATCCTTCGGCGACGCAGGTGCAAAAGAAGCTCAGTCTCAATCTACCACCTTGCAATGACAGTTCCAGCTCTATGGATGATCTCAAAACTCTGGCTCCCACTGATACCAATTCAGATAAGGAGACGAACACCGGCAATGGTGGTGTTGATACCAATATTCCTGACTACAGTGATCCTTCTGCGATGCAGATGAAAAAACAAGCTTGA
Protein Sequence:
- >OMERI01G15790.2|Oryza_meridionalis|C2H2|OMERI01G15790.2
MAPRGKPWKHCCNKCDKSFRSGNALGGHMSCHRRVDNQPKSTSSPPTVVDLHMPLLSSCDDNLLLLPPETQCQMCSKVFSTSGSLREHMMMHGGEKVVVKAEEEAAGLIEALGIADSMQDVMVFSSVKRKRSFRSKRQTPALNLEEIEAADALLLLSGCFDKTSAYEDCYLGGIEDGSLGSIVLTEVNMNALDRCSIRSVDSKKPINDNNSAYKDFYGQSDKENCLTVPKEEMDLNDFDHELVRDAALRKPRTDNLDEEMKFGDLPAAAMKDNSHRCNTCGKSFGSGQALGGHMRRHYVRKCNRHWGVADRAGSVLMKVQKLKLRLDPILFDVTLPALTDGDCCISVEMASDVPQDDVQCHFCGTYLRPRSFRKHQQRCKYNPDALTRQNLSASSIPASATRATHSEMAPDGPQENCQCSFCHKDFESRRSCAEHELQCKNNPDVHSQTEPSDNAQGGIGSLDVHVPRRKRTARNQPLPEQHLKKPSSDYAQGGTSDAPETPPKPTTSEVKVDSAVNAPDITIPDNKDPSVMQKQKKKLDLNLQPHSDSSDQEEQADNFSSINDLSTINTNSDKKKKTITGVADTNIPDHKDPSRMQMQIKLDLNLLPHDDSFSSMDDLNALVPADTNSDKEKKTDNGGVPADANSDKEKRTDNGSVPTGTNSIKEKKTDNGGVDINIPDHKDPSATQVQKKLSLNLPPCNDSSSSMDDLKTLAPTDTNSDKETNTGNGGVDTNIPDYSDPSAMQMKKQA