Information report for OGLUM02G28000.1
Gene Details
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Functional Annotation
- Refseq: XP_015626115.1 — protein indeterminate-domain 4, chloroplastic
- Refseq: XP_015626116.1 — protein indeterminate-domain 4, chloroplastic
- Refseq: XP_015626117.1 — protein indeterminate-domain 4, chloroplastic
- Refseq: XP_015626118.1 — protein indeterminate-domain 4, chloroplastic
- TrEMBL: A0A0D9YWA5 — A0A0D9YWA5_9ORYZ; Uncharacterized protein
- TrEMBL: B8AGE9 — B8AGE9_ORYSI; Uncharacterized protein
- TrEMBL: Q6EU15 — Q6EU15_ORYSJ; Finger protein pcp1-like
- STRING: OGLUM02G28000.1 — (Oryza glumipatula)
- STRING: OS02T0672100-01 — (Oryza sativa)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >OGLUM02G28000.1|Oryza_glumaepatula|C2H2|OGLUM02G28000.1
ATGGCATCCAACTCATCAGCGGCAGCTGTGGCGGCGTTGTTTGGAATTAGGGATGGCGACCATGAGGACCAGATTAAGCCGCTATTTGCCCAGCAGCAGCAACACCACCACCACCAGCCACCTATGGCGCCATCCAACGCCGCGGCGGCGGCTTCTGCTGCAGGGTCGGCGGCCGGTCAAGCGGCCGTGGCGGCGCCACCAGCGAAGAAGAAGAGAACCTTACCAGACCCGGACGCGGAGGTGATAGCGCTGTCGCCGAAGACGCTGCTGGCGACGAACCGGTTCGTGTGCGAGGTGTGCAACAAGGGGTTCCAGCGGGAGCAGAACCTGCAGCTGCACCGGCGCGGGCACAACCTGCCGTGGAAGCTGAAGCAGAAGAACCCGCTGCAGGCGCAGCGCCGCCGGGTGTACCTGTGCCCGGAGCCGACGTGCGTCCACCACGACCCCTCCCGCGCCCTCGGCGACCTCACCGGCATCAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCTCCAAGCGCTACGCCGTCCAGTCCGACTGGAAGGCCCACTCCAAGATCTGCGGCACCCGCGAGTACCGCTGCGACTGCGGCACCCTCTTCTCCCGGAGGGACAGCTTCATCACCCACCGCGCCTTCTGCGACGCCCTCGCCCAGGAGAGCGCGCGGCTGCCACCCGCCGCCGCCGGCCACCTCTACGGCTCCGCCGGCGCCGCCAACATGGCGCTCAGCCTCTCCCAGGTCGGCTCCCACCTCGCCTCCACCCTCCAGGACCACGGCCACCACCACCACCATCACGGCGCCTCCCCGGACCTCCTCCGCTTCGGCGGCAGCGGCGGTGGCGCCATGGCGGCACGCCTCGAGCACCTCCTGTCGTCGTCCAGCGCCTCCGCGTTCCGGCCCCTGCCGCCGCCGCAGCAGCAGCCTCCGGCGCCGTTCCTCCTCGGCGCGGCGCCGCAGGGGTTCGGCGACGGCGGCGACGGCAGTGGTCCGCACGGATTCTTGCAGGGTAAGCCGTTCCATGGCCTCATGCAGCTCCCTGACCTCCAAGGGAATGGCACCGGCGGGCCGTCGCCGTCGGGTCCGGGTCTCTACAACCTCGGCTACATCGCCAACAGCGCGAACAGCTCGGGTACTTCCAGCCATGGCCACGCGAGCCAGGGACAGATGACGAACACCGACCAGTTCAGCGAAGGAGGGGGTGGTGGCGGCGGCGGCGGCGGTTCAGAGACATCGGCGGCGGCGCTGTTCGGCGCCGGTGGGAACTTCTCCGGCGGCGACCACCACCAGGTTTCTCCTGCCGGGATGTACGCGAATGATCAGGCCATGATGCTGCCGCAGATGTCGGCGACCGCGCTGCTCCAGAAGGCGGCGCAGATGGGCTCGAGCACGTCGAGCGCGAACGGCGCCGGCGCGTCCGTGTTCGGCGGCGGCTTCGCCGGCTCGTCGGCGCCGTCGTCCATCCCGCACGGCCGCGGGACGACCATGGTCGACCAGGGGCAGATGCACCTCCAGAGCCTGATGAACTCGCTCGCCGGCGGTGGCAACGCCGACCACCAGGGCATGTTTGGGAGTGGCAGCATGATTGACCCGAGGCTGTACGACATGGACCAGCACGAGGTGAAGTTCAGCCTGCAGCGCGGCGGCGGCGGCGGCGGCGACGGCGACGTGACGCGTGACTTCCTCGGCGTCGGCGGCGGCGGTTTCATGAGGGGGATGTCGATGGCGAGAGGGGAGCACCATGGCGGTGGCGGCAGCGACATGCATGGCACCTTGGAGGCCGAGATGAAGTCGGCGTCGTCGTCCTTCAACGGAGGCAGGATGCAATGA
Protein Sequence:
- >OGLUM02G28000.1|Oryza_glumaepatula|C2H2|OGLUM02G28000.1
MASNSSAAAVAALFGIRDGDHEDQIKPLFAQQQQHHHHQPPMAPSNAAAAASAAGSAAGQAAVAAPPAKKKRTLPDPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPLQAQRRRVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLPPAAAGHLYGSAGAANMALSLSQVGSHLASTLQDHGHHHHHHGASPDLLRFGGSGGGAMAARLEHLLSSSSASAFRPLPPPQQQPPAPFLLGAAPQGFGDGGDGSGPHGFLQGKPFHGLMQLPDLQGNGTGGPSPSGPGLYNLGYIANSANSSGTSSHGHASQGQMTNTDQFSEGGGGGGGGGGSETSAAALFGAGGNFSGGDHHQVSPAGMYANDQAMMLPQMSATALLQKAAQMGSSTSSANGAGASVFGGGFAGSSAPSSIPHGRGTTMVDQGQMHLQSLMNSLAGGGNADHQGMFGSGSMIDPRLYDMDQHEVKFSLQRGGGGGGDGDVTRDFLGVGGGGFMRGMSMARGEHHGGGGSDMHGTLEAEMKSASSSFNGGRMQ