Information report for NNU_007607-RA
Gene Details
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Functional Annotation
- Refseq: XP_010256824.1 — PREDICTED: uncharacterized protein LOC104597114
- TrEMBL: A0A1U7ZX20 — A0A1U7ZX20_NELNU; uncharacterized protein LOC104597114
- STRING: XP_010256824.1 — (Nelumbo nucifera)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g029424m
- Gossypium arboreum: Cotton_A_19663_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D07G0990, Gh_A07G2257
- Malus domestica: MDP0000451038, MDP0000880188, MDP0000150879
- Manihot esculenta: Manes.02G128500.1.p
- Populus trichocarpa: Potri.009G037100.1
- Prunus mume: XP_008222038.1
- Pyrus bretschneideri: Pbr003843.1, Pbr018955.1
- Ricinus communis: 29751.m001879
- Vitis vinifera: GSVIVT01024902001
Sequences
CDS Sequence:
- >NNU_007607-RA|Nelumbo_nucifera|C2H2|NNU_007607-RA
ATGGAAACTGATCGTCCAAGCCCTGAAATTTCAGACCAGGTGGCCGGAAGCTCAGATGAGCAGGGCCCAAGCCCGGCTAGGTCCTACGAATGCACCTTCTGCAAGCGAGGATTCTCTAATGCACAGGCACTAGGGGGCCATATGAATATTCATAGAAGAGATAGGGCAAAGCTCAAACAACCATCGAATATCAGAAGCCATCTCACCTTGGATATCGCCAAGAAAATTCCCAGCTCCCATCCTCAGCTTTCCTCGGGGTATGACTCATCACCCATTTTGGAGTCTAGGGAAGAGAGAAGTGGCAGCTCTCTTAATTGGACATGGATTGTTAACAGAGAAGAAGATGTTGCTGCAGCCAGACAGCAGGAAACTCATGTGGGAGAACTCCGGCAGCTGTCCTTGTTTGAAGAGACTCCTTCAGACGGTGAACATCGGCAATCATCGAGTGATGGGCATGAAGAGAGGATGCAATCAACAGATGGTTATTGGGCAAGAGAGGAGCCAGACTTGGAACTTCGGCTGGGGCCTGAGCCTCAAGATACATCAACAACGGTTGAGTCAGTCAGTCGACATTTGTCCTTGCCATATGGCTATTCACATGGGCGTGTAGCTGGCCAGAATTTCTTAGAGCAGGACCCGCTGTGGAAACTTGAGTACCAATTTCCTGAAGCTGGTGATGAAAGAGGAGGAAACTGCAAAATTCTTTACAGAAAATTCTATCACCGTGTAGAAGACGAGCGCATTTCCAACTTGGCAACTTATTCGTCTTTATCTATCGTCTTCTATTCGAGCTTCTCAAGCCAAGCCCGATGGCTGAGATGCTCTCGATGCGAAGGCAGAGTTAGAAATTACGGTGACCAGAGTGAAACTGTCCGCCGCATTTCCAGCGAAGGCTACAACGAGAGGATGGGCGTATCCCACATCCTGTTCGGAATCGGAGGCTCGTTAAAGACATGGAAGGACCGCCGGTATTACAGCGAGTTATGGTGGAAGCCAAACATTACTCGTGGGTTCGTTTGGCTGGACGACGAGCCCGACAACAAAGATCCCTGGCCTGAAACCTCACCGCCGTATCGTGTATCAGATCACTCGTCGACGTTGAAGTACGCCAAATTGTACTGTTCCCGGCCCGCACTTCGCCTTGCGCGAATCGTACTGGAGAGCTTCCAATTGGGGTTAGAGAACGTGAGGTGGTTCGTGATGGGAGACGATGACACGGTGTTTTTCGTGGAGAATTTGGTTTCCGTCTTATCCAAGTACGATCACAATCAGATGTATTACGTCGGGGGAAACTCGGAAAGCGTAGAACAAGATGTCATGCATTCGTATGATATGGCGTTTGGAGGTGGTGGATTCGCCATCAGCTACCCCCTCGCTGCCGAGGTGGTTAAGGTTCTGGACGGGTGCATTGATCGGTACGCATCTCTCTACGGCGCTGATCAGATGATACAGGCATGCCTGAGCGAGATCGGGGTCCCCCTCACCAAGGAATCTGGTTTCCATCAGGTATGCATGCATGGAATCAGTAGTATCAGTCTCCCTTTCACAGTGCCCTTTAGACTTGTGAGATACCAATTTATAAGAGTAACTAAAGAGATAATTACTGATATCATATCCCCCGTCGTCGTTCTTCAACTCAAATATCAGGTGGACATTCGTGGAGATCCATACGGTCTATTAGCGTCACATCCGGTGGCGCCGTTGGTGTCGCTCCACCACCTCGACTACGTGAAGCCCTTCTTCCCAACCGAAACCCAGCTGGAATCGGTAAGAAGGCTATATGGGGCGTACAAGGCGGACCCCGGTCGAACCCTGCAGAGGAGTTTCTGCTACGACATCAAGCACAACTGGTCTGTGTCGGTTTCTTGGGGCTACACCGCCCAAATATACCCTTACTTGTTGACAGCCAAGGAGATGGAGAGTGCACTGCAAACGTTTCAGACATGGAGGAGCTGGAGTAACGGGCCATTCACTTTCAACACTAGGCCCTTGAGTGGCCTAGCTCCATGTGAACGGCCGCTTATTTACTTACTGGAGCAGGTTAATAATGATGAAATAGGGCAGCGCCAGACGCTGACCACTTATAAGAGGTTTGTGGAAGATCCAGGGCCAGGGGTGGTCTGTAATCAGTCCATCTACGGTGCTGCGTTGGCTGCATACTACGTTAGCGTCTCCGCTTCCAAGTTTGATGGTGGGGAATGGAAGAAGGTGAGAATATTTGAAAATGCATGGGTCCATGGTTTTTCATTCCGGCCAGTACTAGTTACTAGCATGAAGAGGAGGAAGCGAGTTGCCAAGCGAACTCGCACCGAGCTGCCCCGGGATGCAGAGCCCGAGGAGGACATTAGGGAGAGGACGCAAATCTTCTCTCAAGGTATTGAAGATGCTAAGAAGAAGGTCGTCGATGAGTACATCGCCTCGCCGAGCTTTGACGATCTGATAGTGGACTCGTACCGAAGGGGTTTCAAGCTAAGCCGGTGGATGATCCAGAATATGTACCCCGAGCTTGATATTAGTGCCATATCCACTTCGCGCATAACTCAAGAGATGGCCAATGTTGCAGACGGTGAGCCAGATTCCGAGGGCGAGACGGGACCTTCGGGTATTGTTGAAGTGCCTTCTGATAATGAAGAAGTAGCTCTGAGCCTATTAAATTTTTTTTTTGAAATGTACACTCTTACTTTGTAA
Protein Sequence:
- >NNU_007607-RA|Nelumbo_nucifera|C2H2|NNU_007607-RA
METDRPSPEISDQVAGSSDEQGPSPARSYECTFCKRGFSNAQALGGHMNIHRRDRAKLKQPSNIRSHLTLDIAKKIPSSHPQLSSGYDSSPILESREERSGSSLNWTWIVNREEDVAAARQQETHVGELRQLSLFEETPSDGEHRQSSSDGHEERMQSTDGYWAREEPDLELRLGPEPQDTSTTVESVSRHLSLPYGYSHGRVAGQNFLEQDPLWKLEYQFPEAGDERGGNCKILYRKFYHRVEDERISNLATYSSLSIVFYSSFSSQARWLRCSRCEGRVRNYGDQSETVRRISSEGYNERMGVSHILFGIGGSLKTWKDRRYYSELWWKPNITRGFVWLDDEPDNKDPWPETSPPYRVSDHSSTLKYAKLYCSRPALRLARIVLESFQLGLENVRWFVMGDDDTVFFVENLVSVLSKYDHNQMYYVGGNSESVEQDVMHSYDMAFGGGGFAISYPLAAEVVKVLDGCIDRYASLYGADQMIQACLSEIGVPLTKESGFHQVCMHGISSISLPFTVPFRLVRYQFIRVTKEIITDIISPVVVLQLKYQVDIRGDPYGLLASHPVAPLVSLHHLDYVKPFFPTETQLESVRRLYGAYKADPGRTLQRSFCYDIKHNWSVSVSWGYTAQIYPYLLTAKEMESALQTFQTWRSWSNGPFTFNTRPLSGLAPCERPLIYLLEQVNNDEIGQRQTLTTYKRFVEDPGPGVVCNQSIYGAALAAYYVSVSASKFDGGEWKKVRIFENAWVHGFSFRPVLVTSMKRRKRVAKRTRTELPRDAEPEEDIRERTQIFSQGIEDAKKKVVDEYIASPSFDDLIVDSYRRGFKLSRWMIQNMYPELDISAISTSRITQEMANVADGEPDSEGETGPSGIVEVPSDNEEVALSLLNFFFEMYTLTL